Basic Information

Insect: Parnassius orleans
Gene Symbol: -
Assembly: GCA_029286625.1
Location: JAGSMP010000034.1:972507-976808[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.003 0.76 12.3 1.0 3 23 56 77 55 77 0.96

2 23 0.21 54 6.5 0.3 1 22 465 486 465 486 0.95

3 23 4.2 1.1e+03 2.4 0.3 1 22 528 549 528 551 0.82

4 23 0.13 33 7.2 0.3 3 21 562 580 560 581 0.93

5 23 0.21 54 6.5 0.0 3 23 590 611 588 611 0.93

6 23 0.0037 0.94 12.0 0.1 3 23 632 653 630 653 0.96

7 23 0.0012 0.3 13.6 2.5 1 23 659 682 659 682 0.95

8 23 0.078 20 7.9 0.0 1 23 708 731 708 731 0.90

9 23 0.045 11 8.6 4.2 1 23 736 758 736 758 0.97

10 23 0.0058 1.4 11.4 0.2 1 23 764 787 764 787 0.95

11 23 0.0014 0.36 13.3 1.3 1 23 800 822 800 822 0.97

12 23 0.00011 0.028 16.8 1.8 1 23 871 894 871 894 0.97

13 23 0.003 0.75 12.3 1.7 1 23 956 979 956 979 0.96

14 23 0.00069 0.17 14.3 2.1 2 23 1004 1026 1003 1026 0.95

15 23 0.054 14 8.4 0.1 2 23 1032 1054 1031 1054 0.93

16 23 0.0062 1.6 11.3 0.2 1 21 1098 1118 1098 1119 0.95

17 23 0.00026 0.066 15.7 1.0 1 23 1129 1151 1129 1151 0.93

18 23 7e-05 0.018 17.5 0.3 2 23 1240 1262 1240 1262 0.93

19 23 1.1e-07 2.8e-05 26.3 1.1 3 23 1269 1289 1268 1289 0.98

20 23 0.0032 0.8 12.2 0.7 1 23 1308 1330 1308 1331 0.93

21 23 0.089 22 7.7 0.0 1 23 1351 1373 1351 1373 0.98

22 23 0.0074 1.9 11.1 0.4 1 23 1379 1402 1379 1402 0.95

23 23 0.00016 0.04 16.3 0.4 1 23 1410 1433 1410 1433 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.003	0.76	12.3	1.0	3	23	56	77	55	77	0.96
2	23	0.21	54	6.5	0.3	1	22	465	486	465	486	0.95
3	23	4.2	1.1e+03	2.4	0.3	1	22	528	549	528	551	0.82
4	23	0.13	33	7.2	0.3	3	21	562	580	560	581	0.93
5	23	0.21	54	6.5	0.0	3	23	590	611	588	611	0.93
6	23	0.0037	0.94	12.0	0.1	3	23	632	653	630	653	0.96
7	23	0.0012	0.3	13.6	2.5	1	23	659	682	659	682	0.95
8	23	0.078	20	7.9	0.0	1	23	708	731	708	731	0.90
9	23	0.045	11	8.6	4.2	1	23	736	758	736	758	0.97
10	23	0.0058	1.4	11.4	0.2	1	23	764	787	764	787	0.95
11	23	0.0014	0.36	13.3	1.3	1	23	800	822	800	822	0.97
12	23	0.00011	0.028	16.8	1.8	1	23	871	894	871	894	0.97
13	23	0.003	0.75	12.3	1.7	1	23	956	979	956	979	0.96
14	23	0.00069	0.17	14.3	2.1	2	23	1004	1026	1003	1026	0.95
15	23	0.054	14	8.4	0.1	2	23	1032	1054	1031	1054	0.93
16	23	0.0062	1.6	11.3	0.2	1	21	1098	1118	1098	1119	0.95
17	23	0.00026	0.066	15.7	1.0	1	23	1129	1151	1129	1151	0.93
18	23	7e-05	0.018	17.5	0.3	2	23	1240	1262	1240	1262	0.93
19	23	1.1e-07	2.8e-05	26.3	1.1	3	23	1269	1289	1268	1289	0.98
20	23	0.0032	0.8	12.2	0.7	1	23	1308	1330	1308	1331	0.93
21	23	0.089	22	7.7	0.0	1	23	1351	1373	1351	1373	0.98
22	23	0.0074	1.9	11.1	0.4	1	23	1379	1402	1379	1402	0.95
23	23	0.00016	0.04	16.3	0.4	1	23	1410	1433	1410	1433	0.96

Sequence Information

Coding Sequence: ATGGACAGTGAaaaagatgaagaagaagatgaaGAGATGAATGATTCCAGTCAACATTATACAAGTGCGCCCACCAATATGCCTGAAGTGTCCATCACTGTCATGCGTCCCACTGGTGAAACATTGCATGCCCGACAAGGAATCCAACAACTTGCCTCCAAGGATTGTTTAGTATGCGGTCGATCTTATAGGTATTCGCATAACGCAAGGCGTCATGAGCTTACTGCGCATAGTTTTGATAgatacacaaataaaataaccaTTAAAAAGTCTCAGACACACATGCAACCAAAACTCCGACCCAATCCATTTAATCCCAAAGCAAGGCTTATGCCTAATCCAATCAGCCATAAAATGCAGCTTGTTCAAAAAGGAATACCTTCAAAAAATATGCAGCAGAAGGTTGTCACCCCACCAAAGCCTATACCAATAAAAGCGCCAAAAGGCTCGCAAAATAATTTGCCATATCCACTTCGCATAAAAGCTCTTAAAGACttgcaaataaagaaaaaagaacctcaaattttaaaaacattattgaCAACAAAACCTGAAATTTTAGTATCCGAACCAGAAATAATCAACTCTGCTCCAGAAAGTCCGGAAACTTTGATTTCTGAGCCGGAGATAGCTTCATTCCAAGTAGAAACCATTCTGGAAGAACCAGATACTTATAATCAACAACAAGATGACGAAGAGGTAGATGGTGATACGCAAAATAATCAGAGGCATAATTACGACACTGTTGATATGGATTctgaaaatgaaattgaaatcgCACGTCAGCAAGAAGACGCGGTGGAAGGTGAAGGCAAAGTTGAAGATCACCAAGTTGAAAACGAAGGTGAGGAAggaaatgaaatagaaaatttGGACAATGGCgatgaaaataatattgaaagaaaccAAAGCGACAATGACAATGATCACATTGACGATACTGCTGATAGTCAAGATGAAATACAAATCATTAATGAAACGGAAGGTAGAGAGGAAGATGAAACCAAAGAAGGAGAAGAAGACAATGACGAGAGGGATGGTGAACAGCCAGAGTATAACCATGAAGAAAATGAAGATGACGATGATGAGCTACCACCTATAGCTCCAGTTGTAGAAATTAATGAAGACTTGCAAATTAATTCGTTTAATAGTGAGATAAACGAAGAAGAGGAGCTTGATGAAACAGCTGACCCAAATGATACTGCAGATACTGTAAAAGAACTTGATCCTGACAAATTATATGTGACTAAGACACAAAGAgattttattcataagtatcGCGATATCATTGAACAAATCAATACCAAAAGATGTCTATGTTGTGATAAAGAACATCCGCGGCGTAAGGCTGTAATACAACATTTACAGAAAAATGGGCACAAGGTCCCAAAACATACATGCTACAACTGCGTAGTCACTTTTGGCCATATTGGCGCTTTACTTAGCCATATGCGGTCTAACACGTGCACAGATTTgtggaaaattatttataacgaaAATGGAATCACTGATGATTTAGTTTTAGAAGATGAGCCTAAAGATACTAAAGTtcaatataaagatatttttaatgctAGGTCATATGCATGTAAATTATGTCCAGCGAAATTCCAACTTAAACAATTTATTATGAAACATGTATTGGATGTGCATGAGGATGGTCAATCCCGTGTGCATCTTGCTTGTGTTCACTGCGGTTCTCGATTTAAAGACAAGGCTATATGGAAAAGACATATACGTAACGGAGAGTGTACGGTTTACATCGCGTGCGACCTATGTACAGAAATATTTAGTAACATGCAAGCTTTTAATGACCACGCATTGTCTGTACATGCCGGGAATTTCGACCAAACTGATAATCAGAACAAATGTGTTGACGGTAGACCAACAGATTGTCCGATTTGCGGTAAGAAGAATAGCAGCTATCCCAATTTAGTTAAACATTTGAAGATAATTCATTGCGAGGAAAAACCTCATTATTGCCAGCATTGTGATTCCAAATTTGAACAAGCTGCTGATCTTAACAAACACATTTATATGGAACATTCTGATAGAACCTTAGGAATGCAGACCAATGAGCCTGACATGTCGCTCGTCAAAGAAGAGGCCGAAGAATATCATTATTCATGCACAGAATGTAACGCCATATTTGAAACCGTTGATGCTTGGACAGATCATCAGGTGGCTGAACATAATCAAATTGCTCATCATTGTGATCAATGTTATAAGAAATTTTTAAGACCATCGGAACTGGCAGAGCATAAAAATACGCATTTGAGAGTGAAGTTCTATCCTTGCAGTATTTGTACTAATTCTTATAGCACGCCGCAAAAACTTTCAGAACACGTCCAACAAGTCCACCCTGGGGTAGGAGCAAGCGCCGCTTTAGATTCTGAATTTTTCTGTGACATTTGTATTAGGTCGTTCAAAAGTCGTCAAGCCTATTCAAACCATATGCGTATTCACGCTAAAGTACCTACAACTAATCGGAAACCAGGGGAACCTAAAGGATTTGCGCCGCAAATTGTTGGGAAACCGATAAAATCTTTTTCTATGGTACAGCCTGGTTTTGTATCTTTCAAACCTAATTGCAATGTTCCCAATGCACCTTATTCATGTGATATCTGTGGAAAGGGCTTTATGCACAAGAAAAATATCTGGAAGCATAAGAAAGTGTTACATGCTGATATTGTTGGAGACAGAAATGATAGTGAAGAAAATACGATGCAAGCATCTACTGAAGAAGATGAATACAATTTAGATGAAAATGGTGCTGTACTTTCCACTCCCCAGTttaacagttttaattttactaatttaacaAATAGCTTGCAACCGCAAACTTCTCCTCAAGATCCAACACCCTATTCTTGTGAACTATGCTTTAAACGGTTTCCTCTCAGGACAAGTTTATGGAAACACAAACGAGCTAAGCATGGAATTATTAACGCTAGTGCTAGTGGTAGTCCCGATTCTCAAATGATGGGAAGTAGTGAAACCGGCAGATCTAGCTGCACGAtttgtaaaattactttttcagACAAAAAATCTTACTACCGTCATAGGAAAAATGTTCACAAATCATCAGTTCAGATGTGCAAGATTTGTGGTAAGCCTCTAAATTCGACATTGGAATTATATGAGCATTTAAAAGCTGCTCATGCTAGGGAGTTATTAGGATATAATGAAAACCAAGGTTCTAGTAAGTCACAAGAAATTAGTCAAGAATTGGAAGTAGATTATGAAGGTGACCAGGATTCTATAGATCCTAGCTTAGAATACCAAGCTCGATATCCATGTGATACATGCGGAAAACAATTCGTAGGTTTGCTAGCGCTGCAAAACCATCAATGTATTAATCAAATACAATCTTCGCCCCAAACCTTTGATTGCGAGATTTGTCACAAAAGTTATACTTCCATTTCTGCATTAAAAAGTCACCGTGGATGGCATTTACGATCGCCTGACGGAAAAGCGGCTGCCAACAATACAGGTCTATGGATGCCTCAGCACAAAGTAACAAGCAAAGTTAGCAAACATGAAATTGTCGATCCCTCCCAACTTGCAAAAGTGACTCATTCGACTCCTGCAACTGTAGTCAAAAGGAGATTACCACCGGAAGTAGAAGTGACTGTTGTTAACCCAAATAAGAAAATGCGTTCCGATGATTCAGTAGAATTAGAACAGCAGAATTCATCCACTGGAGCAGAAGATAGATATTGCACAATATGTGATAAAGAGTTCACAAAACGAGCGGCTTATCAACGTCACATGGATGAGGTCCATCAACCTAACTCCGTATTTTGTCCCGTTTGTGACAAGAGTTTTACGCGGAAATCAACGCTGATTGTTCATATGAAGAAACATTACGAAAGTGGAGAGGGTAGTTCAGCTGCAACTGATCAGATGGAGGATGACGTTCACGCATGTGACCTTTGTGGTGTTCAATATGATAATGAGAGCGCCCTTAGAGCCCACCGAGCAAGGCATCATGGTGATGAGTCAGGGGAGTCTGAAGATGATGGGACCAGTGTTCCACCTCCTGGTGAATTCACCTGCGCACAATGTGGGGATGGAGTCGCCACACCCCGTGATCTGATTGCCCACCGCTCCATGCATGCTACTCCAACAAAATTCTTCTGCAACATTTGCAAAGTTTACTTTGCTAGAGCTATCGACCTCTCGTCCCACACACGAGCCAGACATGCGGACAATGAAAAGGTTTTTTTCCCATGTGCAATGTGTGACCGTTTTTACATGAACAAGAAAAGTTTGCAACGGCACATTGAGATGGCGCACTGA
Protein Sequence: MDSEKDEEEDEEMNDSSQHYTSAPTNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITIKKSQTHMQPKLRPNPFNPKARLMPNPISHKMQLVQKGIPSKNMQQKVVTPPKPIPIKAPKGSQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEILVSEPEIINSAPESPETLISEPEIASFQVETILEEPDTYNQQQDDEEVDGDTQNNQRHNYDTVDMDSENEIEIARQQEDAVEGEGKVEDHQVENEGEEGNEIENLDNGDENNIERNQSDNDNDHIDDTADSQDEIQIINETEGREEDETKEGEEDNDERDGEQPEYNHEENEDDDDELPPIAPVVEINEDLQINSFNSEINEEEELDETADPNDTADTVKELDPDKLYVTKTQRDFIHKYRDIIEQINTKRCLCCDKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVHLACVHCGSRFKDKAIWKRHIRNGECTVYIACDLCTEIFSNMQAFNDHALSVHAGNFDQTDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHCEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMQTNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCYKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPQKLSEHVQQVHPGVGASAALDSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIVGKPIKSFSMVQPGFVSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIVGDRNDSEENTMQASTEEDEYNLDENGAVLSTPQFNSFNFTNLTNSLQPQTSPQDPTPYSCELCFKRFPLRTSLWKHKRAKHGIINASASGSPDSQMMGSSETGRSSCTICKITFSDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNENQGSSKSQEISQELEVDYEGDQDSIDPSLEYQARYPCDTCGKQFVGLLALQNHQCINQIQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEIVDPSQLAKVTHSTPATVVKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSTGAEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGSSAATDQMEDDVHACDLCGVQYDNESALRAHRARHHGDESGESEDDGTSVPPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARAIDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01155687;
90% Identity: iTF_01154413;
80% Identity: -