Pmac012836.1
Basic Information
- Insect
- Papilio machaon
- Gene Symbol
- kn
- Assembly
- GCA_001298355.1
- Location
- NW:1787920-1833048[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-234 9.3e-230 763.5 0.0 41 387 39 402 21 407 0.98 2 2 0.00051 7 4.4 1.8 442 554 425 539 411 548 0.63
Sequence Information
- Coding Sequence
- ATGTTCGGACTGCACCACCAGGAGGCGGCAGGCGGGCTGGCTCAGCCTCGCGGGCCTGTCACCTCGCTCAAGGAGGACCCCCTGGCGCGCGCCTGGATGACCCCCCGGGGGCACTACAGCAGCGTGGGCGTGGGGCGAGCACACTTCGAGAAACAGCCGCCCAGCAACCTGCGCAAAAGCAACTTCTTCCACTTCGTGGTCGCGCTCTACGACCGCGCTGGACAACCCGTCGAGATTGAGAGGACAGCGTTCATTGGATTTATAGAAAAGGACCAAGAAGCCGAAGGACAGAAGACTAACAATGGAATTCAATACAGACTTCAACTACTGTATGCCAATGGTATACGACAAGAACAAGACATCTTCGTTAGGCTCATTGACTGAATAACTAAGGCTcCAATCGTCTACGAGGGTCAAGATAAGAATCCAGAAATGTGCAGAGTGCTGTTAACCCACGAAGTAATGTGCAGTCGATGTTGCGACAAGAAAAGCTGTGGAAATAGAAACGAAACGCCTTCGGATCCTGTTATAATTGATCGattttttcttaaattctttCTGAAATGCAATCAGAATTGTTTGAAAAACGCCGGCAACCCTAGAGATATGAGAAGATTTCAAGTGGTGATATCAACACAAGTAATGGTGGACGGTCCGCTGCTGGCCATATCAGACAACATGTTCGTGCATAACAACAGCAAGCATGGCCGGCGCGCCAAGCGCCTCGACCCGTCTGAAGGTACTGACGCCGCGCCAGACAATCATTCAGGTCTGTATCCACCCCTGCCGGTTGCGACGCCTTGTATTAAAGCGATATCACCCAGCGAAGGCTGGACCTCAGGAGGTTCCACTGTCATTATTGTAGGGGACAACTTCTTCGACGGACTTCAAGTTGTGTTTGGAACAATGTTAGTTTGGAGTGAGttaATAACATCACACGCGATACGGGTGCAGACGCCACCGCGGCACATACCGGGCGTCGTCGAGGTGACCCTCTCCTACAAGAGCAAGCAGTTTTGTAAGGGAGCGCCCGGAAGATTTGTATATGTTTCGCTCAACGAGCCTACGATAGACTACGGCTTCCAACGACTGCAGAAATTGATACCGAGGCATCCAGGCGACCCTGAGAAATTACCAaagGAGATAATCCTGAAGCGAGCGGCAGACCTAGCGGAGGCGCTGTACTCGATGCCGCGCAACAATCAGCTGCTGCCGCGGTCGCCGCCACCCTCTGCGCCCTTCAACACCTATGCGCAGGACGCCACCCCTCACCAGTGGACAGAAGAGGAGTACGCGCGCAGCGGCGGCTCTGTTTCTCCGAGGTACTGCGCGGGCGCCGCCACGCCGCACTACGCGCAACACTACGCGCCGCCCACCTCGCTCTTCAACTCCACCTCACTGTCGTTAGGACCTTACCATCCGAGTGCGAATGGACAAATAGCTGACCATCACAGCTATGACGTTTATTACTCTAAAGATAGCGTCCATTACGATGAAAGGAATGAGAAATGCTCGGACAACTTCCAAGCAAACAGTCATACAAAATGCAGTCCCGGCCTTATGAAAAGGCAACAGTGTAAAGAGGCCAAGCTAAGGAGCGCGTTCGCGGCTGTAAAACAGAACCAACTGCCAACATTTAGTGCCAACATTTAG
- Protein Sequence
- MFGLHHQEAAGGLAQPRGPVTSLKEDPLARAWMTPRGHYSSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLID*ITKAPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAAPDNHSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLLPRSPPPSAPFNTYAQDATPHQWTEEEYARSGGSVSPRYCAGAATPHYAQHYAPPTSLFNSTSLSLGPYHPSANGQIADHHSYDVYYSKDSVHYDERNEKCSDNFQANSHTKCSPGLMKRQQCKEAKLRSAFAAVKQNQLPTFSANI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843290;
- 90% Identity
- iTF_01153643; iTF_01147213; iTF_01149363;
- 80% Identity
- -