Ppol002832.1
Basic Information
- Insect
- Papilio polytes
- Gene Symbol
- kn
- Assembly
- GCA_000836215.1
- Location
- NW:466602-512734[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-239 2.8e-235 781.5 0.0 11 387 83 469 75 474 0.97 2 2 0.0013 15 3.1 2.7 442 540 492 588 478 631 0.65
Sequence Information
- Coding Sequence
- ATGGTACACGACATGGTGTGTCAGTGTCAAGCTTCGAGACGCGTGCTCTTCGCGATTCGGTCGGACGAGCTGAACGCGGCGGGCGGGTACACGGGCTCGCCGTGGCCGCCGCTGGACCTAGACCCCGTGGGATGGGGACGCAAGCTGTACCCGACGGGAGCGCCGAGGTCCTCGGGTGGGTTAATGTTCGGGCTGCACCACCAGGAAGCGGCGGGAGGGCTGGCGCAGCCACGCGGGCCCGTCACCTCGCTCAAAGAGGAGCCACTGGCCCGCGCGTGGATGACACCTGGCGCACTAGTTGACAACACCAACGTGGGTGTGGGACGCGCGCACTTCGAGAAGCAGCCGCCCAGCAACCTGCGCAAAAGCAACTTCTTCCACTTTGTGGTGGCGCTGTACGACCGCGCCGGACAGCCCGTCGAGATTGAGAGGACAGCTTTCATTGGATTTATAGAGAAGGATCAAGAAGCGGAAGGACAGAAGACTAACAATGGAATTCAATACAGACTTCAACTGCTGTACGCTAATGGTATACGACAAGAACAAGACATCTTCGTTAGGCTCATTGACTCCGTCACAAAACAGCCAATCGTCTACGAAGGTCAGGATAAGAACCCAGAAATGTGCAGAGTACTGTTAACCCATGAAGTAATGTGCAGTCGTTGTTGCGATAAGAAGAGCTGTGGCAATAGAAACGAAACGCCTTCAGATCCTGTTATAATTGATCGattttttcttaaattcttCCTGAAGTGCAATCAGAATTGTTTGAAAAACGCCGGCAATCCTCGAGATATGAGAAGATTTCAAGTGGTGATATCAACTCAAGTGATGGTGGACGGTCCGCTGCTCGCGATATCAGACAACATGTTCGTGCACAATAACAGCAAGCACGGCAGACGCGCTAAGCGCCTAGACCCGTCTGAAGGTACTGACGCCGCGCCAGACAATCATTgtacgttttCAGGTCTGTACCCACCCTTGCCTGTCGCGACGCCGTGCATCAAGGCGATATCACCGAGTGAGGGCTGGACCTCTGGAGGCTCCACTGTCATTATAGTAGGAGACAACTTTTTCGATGGCCTTCAAGTTGTGTTCGGAACAATGTTAGTTTGGAGTGAGTTAATAACATCACACGCGATACGAGTGCAGACACCGCCGCGTCACATACCCGGCGTCGTCGAGGTGACCCTGTCATACAAGAGCAAGCAGTTCTGCAAGGGAGCGCCTGGCAGATTTGTATATGTTTCAGCGCTCAACGAGCCTACCATCGACTACGGTTTCCAGCGACTACAGAAATTGATACCGAGGCATCCTGGTGACCCTGAGAAATTACCAAAGGAGATAATCCTGAAACGAGCGGCGGACTTAGCGGAAGCGCTGTACTCTATGCCGCGCAACAACCAGCTGCTGCCGCGAACGCCGCCGCCCTCCGCACCCTTCAACACCTACGCACAGGACGCCACACCCCACCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGATCGGTGTCGCCGCGGTACTGCGCCGGCGCCGCCACGCCGCACTACGCGCAGCACTACGCGCCGCCCACCTCGCTCTTCAACTCCACCTCACTGTCATTAGGACCTTACCATCCGAGTGCAAATGGACAAATAGCTGACCATCAGAGCTATGACGTTTATTACTCGAAAGATACCGTCCATTACGATGAAAGGAATGAGAAATGCTCGGACGACCTCCAAGCAAACAGTCATACAAAATGCAGCCCCGGCCATATGAAAGGGCAACAGTGTAAAGAGGCCACGCTAAGAAGCGCGTTCGCGGCTGTAAAGCAGAGAATGGGCGGGTTGGTGTCGTCTCCGTTCAGCGTCAACCCGTTCTCTTTGCCGACATGCAGCGCGCAGCAATATGCACAAACAGCACCTCTAGCCTCCAAGTAA
- Protein Sequence
- MVHDMVCQCQASRRVLFAIRSDELNAAGGYTGSPWPPLDLDPVGWGRKLYPTGAPRSSGGLMFGLHHQEAAGGLAQPRGPVTSLKEEPLARAWMTPGALVDNTNVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAAPDNHCTFSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLLPRTPPPSAPFNTYAQDATPHQWTEEEYARSGGSVSPRYCAGAATPHYAQHYAPPTSLFNSTSLSLGPYHPSANGQIADHQSYDVYYSKDTVHYDERNEKCSDDLQANSHTKCSPGHMKGQQCKEATLRSAFAAVKQRMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843290;
- 90% Identity
- iTF_01144347;
- 80% Identity
- -