Papo019110.1
Basic Information
- Insect
- Parnassius apollo
- Gene Symbol
- kn
- Assembly
- GCA_907164705.1
- Location
- CAJQZP010001196.1:11544291-11658856[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-242 1.6e-237 790.2 0.0 11 387 62 436 53 441 0.97 2 2 0.00016 4.4 6.1 1.7 440 555 457 574 448 585 0.65
Sequence Information
- Coding Sequence
- TTGAACGCGGCGGCGGGCGGGTACACGGGCTCGCCGTGGCCGCCGCTGGAACTCGACCCCGTGGGATGGGGACGAAAACTATACCCTACGGGAGCGCCAAGGTCTTCAGGTGGGCTGATGTTCGGGCTGCACCACCAGGAGGCAGCAGGCGGGCTGCACGCACAGCCCCGCGGCCCCGTCACCTCGCTGAAGGAAGAACCTCTCACGCGTGCCTGGATGACACCCGGCTCCCTAGTTGACAACACCAACAGCGTGGGCGTTGGAAGAGCACATTTTGAGAAGCAGCCTCCCAGCAACCTGCGCAAGAGCAATTTCTTCCACTTCGTTATAGCACTCTACGACCGCGCCGGGCAACCCGTCGAGATCGAGCGCACTGCCTTCATCGGTTTCATAGAGAAAGATCAAGAAGCTGAGGGACAGAAGACTAATAATGGAATTCAATACAGACTTCAACTTCTATATGCTAATGGTATACGACAAGAACAAGACATTTTCGTTCGGCTCATTGACTCAGTTACAAAACAGccTATCGTCTACGAGGGGCAAGATAAGAACCCGGAAATGTGCAGGGTGTTGTTAACACATGAAGTTATGTGCagTCGGTGTTGTGACAAGAAGAGTTGTGGAAATAGAAACGAAACGCCTTCGGACCCTGTCATTATTGATCGATTTTTTCTGAAGTTCTTTCTGAAGTGCAACCAGAATTGCTTAAAGAATGCTGGTAACCCTCGAGATATGAGAAGGTTTCAAGTGGTAATATCAACGCAAGTGATGGTGGATGGGCCGCTACTGGCAATATCCGACAACATGTTCGTCCACAACAACAGCAAGCACGGGCGGCGTGCCAAGCGCCTGGACCCGTCTGAAGCGGGTCTGTACCCTCCACTACCAGTTGCAACACCTTGCATTAAGGCTATCTCGCCGAGTGAAGGTTGGACTTCGGGAGGATCTACAGTTATTATCGTGGGCGACAACTTCTTCGATGGGCTTCAAGTTGTATTCGGCACAATGTTGGTTTGGAGTGAGTTAATAACGTCGCACGCAATACGAGTGCAGACTCCACCGAGGCACATACCTGGCGTAGTGGAGGTTACGCTGTCTTACAAGAGCAAGCAGTTCTGCAAAGGAGCGCCCGGGAGATTCGTTTATGTTTCACTCAACGAGCCGACCATAGATTACGGCTTCCAGAGGCTGCAGAAACTTATACCAAGGCATCCGGGCGATCCGGAAAAATTGCCTAAGGAAATAATACTGAAGCGCGCGGCCGACCTGGCGGAGGCGCTGTACTCGATGCCGCGCAACAACCAGCTGCTGCCGCGCTCGCCGCCGCCATCCGCGCCGTTCAACTCTTACGCACAGGACGCCGCTACACACCAGTGGACCGAAGAAGAGTACGCGCGCAGCGGCGGCTCGGTGTCGCCGCGGTACTGCGCCGGCGCCGCCACGCCGCACTACGCGCAGCACTACGCGCCGCCCACCTCGCTTTTCAACTCCACCTCTCTGTCGTTAGGACCGTACCACCCGGCTACAAACGGACAAATAACTGACCATCACAACTATAACGCGTATAACTCGAAAGATAGCGTCCATTACGCTGAAAGGAATGAGAAATGCGCGGTCGACTTTGAAGCGAACAGCCATACAAAATGCAACACGAGCTATGTGAAAGGGCAACACTGTAAAGAGGCTAAGCTAAGGAGCGCGTTCGCTGTTGTAAAGCAGAGCCCGCAACATAGCTGGCAACATTTATCCGTGCAGTGTTAG
- Protein Sequence
- LNAAAGGYTGSPWPPLELDPVGWGRKLYPTGAPRSSGGLMFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPGSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLLPRSPPPSAPFNSYAQDAATHQWTEEEYARSGGSVSPRYCAGAATPHYAQHYAPPTSLFNSTSLSLGPYHPATNGQITDHHNYNAYNSKDSVHYAERNEKCAVDFEANSHTKCNTSYVKGQHCKEAKLRSAFAVVKQSPQHSWQHLSVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00959956;
- 90% Identity
- iTF_01144347;
- 80% Identity
- -