Pxut006399.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- kn_1
- Assembly
- GCA_000836235.1
- Location
- NW:3737078-3780569[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-240 3.2e-236 784.9 0.0 11 387 22 405 14 410 0.97 2 2 0.00057 8.1 4.3 0.4 442 495 428 477 414 546 0.68
Sequence Information
- Coding Sequence
- ATGTTCGGACTGCACCACCAGGAGGCGGCGGGCGGGCTGGCTCAGCCTCGTGGGCCTGTTACCTCGCTCAAGGAGGAGCCCCTGGCTCGCGCCTGGATGACACCCGGGGCACTAGTTGACAACACCAACAGCGTGGGCGTGGGACGAGCACACTTCGAGAAGCAGCCTCCCAGCAACCTGCGCAAAAGCAACTTCTTCCACTTCGTGGTCGCACTCTACGACCGCGCAGGACAACCCGTCGAGATCGAGAGGACAGCGTTCATTGGATTTATCGAAAAGGACCAAGAAGCCGAAGGACAGAAAACTAACAATGGAATTCAATACAGACTTCAACTTCTGTACGCCAATGGTATACGACAAGAACAAGACATCTTCGTTAGACTCATTGACTCCGTCACAAAACAGCCAATCGTCTACGAGGGTCAGGATAAGAATCCGGAAATGTGCAGAGTGCTGCTAACCCATGAAGTAATGTGCAGTCGATGTTGCGACAAGAAGAGCTGTGGCAATAGGAACGAAACACCTTCGGATCCTGTTATAATTGATCGattttttctaaaattcttTCTGAAATGCAATCAGAATTGTTTGAAAAACGCCGGCAACCCTCGAGATATGAGAAGATTTCAAGTGGTGATATCAACGCAAGTAATGGTGGACGGTCCGCTGCTGGCCATATCGGACAACATGTTCGTGCATAACAACAGCAAGCACGGCCGACGCGCTAAGCGCCTCGACCCGTCTGAAGGTACTGACGCCGCGCCAGACAATCATTGTCTGTACCCGCCACTGCCTGTCGCAACACCTTGTATCAAGGCGATATCGCCCAGCGAAGGCTGGACCGCAGGTGGCTCCACTGTCATCATAGTAGGGGACAACTTCTTCGATGGACTTCAAGTTGTGTTTGGAACAATGTTAGTTTGGAGTGAGttaATAACATCACACGCGATAAGAGTGCAGACTCCACCGCGACACATACCCGGTGTCGTCGAGGTGACCCTTTCTTACAAGAGTAAGCAGTTCTGCAAGGGAGCGCCTGGCAGATTTGTATATGTTTCAGCGCTCAACGAGCCTACGATCGACTACGGTTTCCAACGATTGCAGAAATTAATACCAAGGCATCCAGGCGACCCTGAGAAATTACCGAAGGAGATAATCCTGAAACGAGCGGCAGACCTGGCGGAGGCCTTATACTCGATGCCGCGCAACAATCAGCTGCTGCCGCGTTCTCCGCCACCTTCCGCACCCTTTAACACCTACGCTCAAGACGCCACCCCCCATCAGTGGACAGAAGAGGAGTACGCGCGCAGCGGCGGCTCTGTTTCTCCGCGGTACTGCGCGGGCGCTGCTACGCCGCATTACGCGCAGCACTACGCGCCGCCTACCTCGCTCTTCAACTCCACCTCACTGTCGTTAGGACCTTACCACCCCAGTGTGAATAGACAAATAGCTGACCACAGCTATGACTTTTATTACTCGAAAGATAGCGTCCGTTTCGATGAAAGGAATGAGAAATGCTCGGACGAACTCCAAGTAAACAGTCATACAAAATGCAGTCCCGGCCTTATGAAAGGGCAACAGTGTAAAGAGGCCAAGCTAAGGAGCGCGTTCGCGGTTGTAAAGCAGAACCCACACATAGCTGCCAACATTTAG
- Protein Sequence
- MFGLHHQEAAGGLAQPRGPVTSLKEEPLARAWMTPGALVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAAPDNHCLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLLPRSPPPSAPFNTYAQDATPHQWTEEEYARSGGSVSPRYCAGAATPHYAQHYAPPTSLFNSTSLSLGPYHPSVNRQIADHSYDFYYSKDSVRFDERNEKCSDELQVNSHTKCSPGLMKGQQCKEAKLRSAFAVVKQNPHIAANI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00959956;
- 90% Identity
- iTF_01144347;
- 80% Identity
- -