Phep005147.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pandemis heparana
Gene Symbol
-
Assembly
GCA_963854515.1
Location
OY978009.1:12642010-12651710[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.014 0.9 10.8 0.6 3 23 734 755 733 755 0.96
2 23 0.71 47 5.4 0.2 1 21 1137 1157 1137 1158 0.96
3 23 9.8 6.5e+02 1.9 0.3 1 22 1200 1221 1200 1223 0.82
4 23 0.0017 0.11 13.7 0.7 3 21 1234 1252 1232 1253 0.95
5 23 1 66 5.0 0.3 3 23 1262 1283 1260 1283 0.91
6 23 0.011 0.71 11.2 0.2 3 23 1303 1324 1301 1324 0.96
7 23 0.017 1.1 10.6 2.4 1 23 1330 1353 1330 1353 0.92
8 23 0.18 12 7.3 0.0 1 23 1379 1402 1379 1402 0.90
9 23 0.027 1.8 9.9 3.4 1 23 1407 1429 1407 1429 0.97
10 23 0.028 1.8 9.9 0.3 1 23 1435 1458 1435 1458 0.95
11 23 0.0034 0.22 12.7 1.3 1 23 1471 1493 1471 1493 0.97
12 23 0.00026 0.017 16.3 1.8 1 23 1542 1565 1542 1565 0.97
13 23 0.0057 0.37 12.0 1.8 1 23 1635 1658 1635 1658 0.96
14 23 0.0016 0.11 13.8 2.1 2 23 1683 1705 1682 1705 0.95
15 23 0.13 8.4 7.8 0.1 2 23 1711 1733 1710 1733 0.93
16 23 0.014 0.95 10.8 0.2 1 21 1774 1794 1774 1795 0.95
17 23 0.0018 0.12 13.6 0.6 1 23 1805 1827 1805 1827 0.93
18 23 0.00025 0.016 16.3 0.4 3 23 1922 1943 1921 1943 0.93
19 23 4.8e-07 3.2e-05 24.8 1.4 3 23 1950 1970 1949 1970 0.98
20 23 0.012 0.78 11.0 0.4 3 23 1993 2013 1991 2014 0.95
21 23 0.14 9 7.7 0.0 1 23 2035 2057 2035 2057 0.98
22 23 0.04 2.7 9.4 0.6 1 23 2063 2086 2063 2086 0.95
23 23 0.00037 0.025 15.8 0.4 1 23 2094 2117 2094 2117 0.96

Sequence Information

Coding Sequence
ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAAGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCACGTCCTCGCATCAAAAATCAAGGATTGCGTGGCCGTTCAGATAAACGAGAATGACGACCTGCCTACAAATGCCTGCAGAAAATGCGTGGACAATGTCAATAACTGGCATGTATTTAAGACAGTATGTGAAAGGACACAAAACAAACTACAGTCTCTGATTAAAAAAGATGGCAGCCAACTAGAAGAGCTGAAAATAAAAAGTGAACCGCTGTCAGATGAGGCCTATGATGATGGAGTGGTTATTGATGGAAGCTACCAAGAGGAGGCTGCTGGCTCCAGCAAAGTGCAGCCCGAAGGCCCACCTATCTTGGCTTCGCTGGGACTCACACCGCGGAGTGATAAGAATTATGTTGATCCTAGGATGGATTGGCACCGGGTCCATGCTATTTTGGACATGGTTCAAGATGATAATGTTATCAACTCGCTGCAGTCTGCTGAAGAATGTGATATACTGCTACAGTCGGATCATGACTCAGACTCTGACGTAGAACTGGATTGTGACATTGATGACATATTCGTTGATTGTAAAGATGGGTACAAGTTGAGAAACCAGAAAGTAATTTCAAAGAGACCATTAGTATCTGGTCCTGAAAATTATCCAAAGGTTACCAATGCTTTAAGGAAGAGAAGTGATAAACGGTGCAAACCTTGTCCGCAGCCTAAACATGCCTGGGAGTTGATCTTCACCAAAGACCTACTCGAACTGATTGTTATGGCCACTAATGAGAACATCACCAAAAATGGCAGAAGCTTTTCCTGTAGCACCAATATCTCTGAAATAAGAACATTTATTGGCATATTATATTTTCATGGCATAATGAGACCAACACATCAAAAACTAAATGATTTATGGCATGTAGAATATGGATTAACTTGCATCAAACATGCTATGAACTTTGAAAGATTTAAGTTTCTTCTAGAGAACTTGAATTTTTATTATGATGACAGCGAAAATCTCATGCGGTTTGACATTACGAAACAGATGCGTACAGTGTTGGAGATTTTCACTTTGAATTGCAGATCAGCTTATGCTATTGGAGATGTCGCAGTTGTTGATGATATAGTTATGCCAGTTTTCGGACCAGCTCCATTCAGATATAACATAGAAAAtaaagcaattaaaactggTATTAAAATGGTGCTGCTAGTTGATTCTACAAACTTTTATATAAGCAATTTAGATGTCATTACTGATTCATATTTTGGAGCGGATGAGATAGTTAGTAAATTAGTCCAACATTTGGCTGGAACTGGCAGAGTGATTATCATGGACAACTGGTTTTCGTCATACACCTTGATTGAGAAGTTGAAGCTTGAATACAGCTTGTTTTGTTTAGGGGCTTTGAAACAAAACGATGAGTGTATACCCCCGTTCTTCGTGTCTCGTAATAGAATGGCAAAACCAGTTTTAGTAGGTTACTTTGATGAAGGTTACACACTGACTTCTCAAATGACTTGTAAAACTAAATCAGTCAATGTACTGACCAGTGATCCGAAGTTTTACAGAAAAGGTCTTTTAAATAAATCATCTGCGGCCACTGAATACAAACGGAACCAATCTGCGGTCCAAGTTGTAGATGTGCTGATGCATTATTATACGACCATGCAGTATACTAACAGTTGGATGATGTCTTTGTTCTTTACATTACTCAATATAGCCTCTATCAATGCTCAAGTGATTTGGTCAGCATACAACACGCGGGATGTTGTCAAGCGGAGATTATTTATACAAGAGTTGGCTTTGAGCCTCATGAAGACTGACGCTTCATTCCCAATGTCTCCAGTCACCCAAACTATATTGAAGTGTAGTCCTATAGCTAAAACCAGAAAACGATGCAAACTCTGTGCTAAAACTGCTAAACGCGATAGGCGTACTAAGCAATTTTGTGTGCGGTGTCGTTCACCAATTTGTAGAGAACACGCTGTGGGTGTCGAGAGCGAAAAAGACGAAGAagaagatgaagatgatgaattGATGGAGCCAGCCCAGCAGTACAACAAAGTGCCGAGCATGCCTGAGGTGTCCATAACGGTGATGCGGCCGACGGGCGAGACGCTGCACGCGCGGCAGGGCATCCAACAACTAGCTAGCAAGGACTGCCTCGTCTGCGGTCGCGCTTACCGCTACTCGCACAACGCGCGCCGCCACGAACTCACCGCTCATAGCTTTGACAGGTACACcaacaaaataaacaacaaaaaaaccaaAACGCACATGCAACCCAAACTTAGACTCAACCCGTTCAACCCCAAAGCCCGGCTCATGCCCAACCCAATTAACCACAAAATGCAATTCCAAAAACCAATGCCGACTCGCATCATGCCGTCCAGAGTAGTCGCCCCACCGAAACCGCTAGCGATCAAAAACACAAAACCCGTACACAACAATCTACCTTATCCTTTGCGAATAAAAGCACTCAAAGATTTGCAAATTAAGAAAAAAGAACCACAAATTTTGAAAACTTTGCTGACGTCAAAACCGGAATATTTGGTTTCCGAACCGGCTATTATTAATTCGGGCCCAGAAAGTCCAGAGACTTTAATATCGGAGCCAGAGATTGCCTCATTCCAAGTTGAAACGATCTTGTCGGAACCAGGCTTTGATCAAAATCATGAAGAAGAAGAGGAGGCTGATGAATCcttaaatcaaaatcaaaattacgaTACTGTGGACATGGAGTCTGATCATGAAATCGAAATCGCCCGTCAAAAAGAAAATGAAGTTGAAATGGATGAAAATCAGGTTGAACACGATGAAGATGAAATGCAACAAGACAATGAAAATATGGATAATACAGAAGGTGAAATGAGCGATAATGAGAATGGAAATCAAGAGGAGGATGATGAACAAGGTGAAAGTCAAGGTGATATGATAATAGATGAGCACAATGAAGCTCAAGGCGAAGACGGTGAAGGAGACAACGAAGAAGACAACGGAGATAGAGACGACGACCAAGATGGCAATGAAGAAAATGAAAACGACGAAGATGAAGATCTTCCTCCAGGGTTGGCACCTGTTGTTGAGATAAACGAGGACATGCAAACTAACTCTTATAATAGTGAACAAAATGAAGAAGAAGAGGAAGAACTCGATGAATCGGCTGCCAATGACAACATTGATGATGACGTCAAAGAGCTTGACCCTGATAAGGTTTATGTCACGAAAACTCAGAGAGATTTCATTCAGAAATATAGGGACATAATTCAACAGATTAACACTAAACGCTGTCTCTGTTGCGATAGGGAACATCCACGCAGAAAAGCTGTTATCCAACATCTCCAGAAAAATGGACACAAAGTACCAAAACACACGTGTTATAATTGCGTTGTAACTTTCGGTCACATTGGCGCATTGCTTAGCCATATGCGTGCTAATGTTTGCACAGATCTATGGAAGATAATCTATAATGAAAACGGAATAACTGACGATTTGGTGATGGAAGATGAACCTAAAGATAACAAAGTGCAATATAAGGATATTTTTAATGCCAGATCGTATGCCTGCAAACTGTGTCCGGCTAAGTTCCAATTGAAACAGTTTATTATGAAACATGTTCTGGATGTTCACGAAGATGGTCAATCCAGGGTGCCAATGGCCTGCGTGCATTGCGGGTCGAGGTTCAAAGACAAATCCTTATGGAAGAGACACATTCGGAACGGAGAATGTACAGTTTACATTGCTTGCGATCTTTGCTCTGAAAAATTCGTCAATATGCAAGATTTCAACGATCATGCTTTACATGTGCATGCGGGCAGTTTCGATCCCGATAATCAAAACAAATGCATCGACGGTCGTCCAACAGATTGTCCTCTATGCGGTAAAAAGAACAGCAACTATCCAAATTTGGTGAAACATATAAAGTCAGCCCATAATGAAGACAAGCCGCATTACTGTCAACATTGTGATGCCAAATTTGAGCAAACTCCCGATCTGAACAAACATATTTATGCTCAGCATTCAGACAAAGTGATGGGTGCACAGGCCATGGAACCTGATATGTCAATCATCAAGGAAGAAGCCGAGGAGTATCATTATTCCTGCACAGAATGTAACGCTATATTCGAAACTGTCGACGCCTGGACGGACCATCAGGTAGCTGAACACAATCAAGTCGCCCACCACTGCGACCAGTGTGAAAAGAAGTTCCTGCGGCCGTCAGAGCTAGCAGAACACAAAAACACTCATTTGAGGGTTAAATTTTATCCTTGCAGTGTTTGCTCTAATTCATACAGTACTCCTCAAAAGCTATCTGAGCACGTGCAACAGTCCCACCCAGGTGCCTCGGCCTACGCCGCAGCTGAAACCGAGTTCTTCTGCGATATCTGCATTCGGTCATTCAAAAGCCGTCAAGCTTACTCTAATCATATGCGCATCCACGCCAAAGTGCCGACCACTAACAGGAAACCTGGCGAGCCTAAAGGCTTCGCACCACAAATTATTGGCAAGCCTATCCGCCAGTTCCCTATGATCCAGCCGGGGTTGGTCTCCTTCAAGCCCAACTGTAATGTTCCTAATGCTCCTTATTCATGTGACATTTGCGGCAAAGGTTTTATGCATAAGAAGAATATATGGAAACACAAGAAGGTGTTGCATGCGGACCTCCTGAATGAACGAAATGACAGCGAAGACAACACTATGCAGGCGTCCACCGAAGAAGACGAATACAATGTTGACGAAAACGGCACTGCTTTGTCAACACCACAGTTCAACAGTTTTAATTTCTCGAACTTTGCTAATAATGTGCAACAACAACAGCAGCAGCATCAACAACAATCGACGCCAACAAATGATGCCTTGCCTTTCTCCTGCGAACTTTGTTACAAACGGTTCCCACTTAAAACAAGTTTGTGGAAACACAAACGCGCCAAACACGGTATCATTAACGCGAGCGCGACCGGCAATCCCGAGAATCAAGCCCAGCCATCTTCGGAAGGTGGCAGGTCTAGTTGCACGATTTGCAAGATTACATTCTCTGACAAAAAGTCGTATTATCGCCATAGGAAAAACGTGCACAAATCCACCGCACAAATGTGTAAGATTTGCGGTAAACCACTCAACTCGACTTTAGAGTTGTATGAGCACTTGAAGGCTGCCCACGCCCGGGAACTGCTGGGATACAATGCCAATCAAGGCACAAGTAAAGCACAAGAGGAGGTAAAAATAGAATATGAGCCCGAACCTGAAATTAATGATCCGAGCGCAGAGTATCAAGCGCGTTACCCATGTGATACATGTGGCAAACAATTCGTAGGGCTTCTGGCGTTGCAGAACCATCAATGTATAAACCAATCCGCTGCAGAGCCTCAAACTTTTGACTGCGAAATATGCCACAAGAGTTACACTTCAATAGCTGCGTTGAAGAGCCATCGCGGCTGGCATTTGCGCTCTCCTGACGGCAAGGCTGCAGCGAATAACAGCGGCCTATGGATGCCACAGCACAAAGTAACGAGCAAAGTCAGTAAGCATGAAGTCGTAGATGCCTCACAACTAGCGAGAGTCACCCACTCCACGCCCACCGCAACTCCTGCTACTACTACTAAACGGCGACTACCACCAGAAGTCGAAGTAACCGTCGTCAATCCAAATAAGAAAATGAGATCAGATGATTCCATGGAACTCGAACAGCAGAATAGTTTAACCGGAACTCTGGAAGATAGATTTTGCACAATTTGCGACAAAGAATTCACCAAACGTGCGGCTTACCAACGCCACATGGACGAAGTGCACCAGCCGAACTCTGTGTTCTGCCCAGTGTGCGATAAGAGCTTCACTCGGAAATCGACCCTGCTCGTCCATATGAAGAAACATTACGGCGGCGACGGAGAAGGTAGTTCGAGCGCGATCGGTCAAACGGCTGAGGATGATATGTACGGGTGCGATCAGTGCGGGACTCAGTACAACAGCGAAGCAGCGTTGCGAGCGCACCGAGCGCGACACCATGCAGACGACTCTAACGAGTCTGAAGACGACGGCAACGTGCCGGTAGCCCAGCCCGGCGAGTTCACTTGTGGCCAGTGCGGCGACGGCGTCGCCACGCCACGCGACCTGATCGCCCACCGATCCATGCACGCGACACCGACCAAATTCTTCTGCAACATCTGCAAAGTTTACTTCGCACGCGCTCTGGATCTCTCCTCCCACACTCGGGCAAGGCATTCCGACAACGAAAAGGTCTTCTTCCCCTGTGCCATGTGCGATCGTTTCTACATGAATAAGAAAAGCTTACAGCGACACATTGAGATGGCCCACTGA
Protein Sequence
MSVNYDRVCRLCLSSRSELLPIFPTTSSDDSEPHVLASKIKDCVAVQINENDDLPTNACRKCVDNVNNWHVFKTVCERTQNKLQSLIKKDGSQLEELKIKSEPLSDEAYDDGVVIDGSYQEEAAGSSKVQPEGPPILASLGLTPRSDKNYVDPRMDWHRVHAILDMVQDDNVINSLQSAEECDILLQSDHDSDSDVELDCDIDDIFVDCKDGYKLRNQKVISKRPLVSGPENYPKVTNALRKRSDKRCKPCPQPKHAWELIFTKDLLELIVMATNENITKNGRSFSCSTNISEIRTFIGILYFHGIMRPTHQKLNDLWHVEYGLTCIKHAMNFERFKFLLENLNFYYDDSENLMRFDITKQMRTVLEIFTLNCRSAYAIGDVAVVDDIVMPVFGPAPFRYNIENKAIKTGIKMVLLVDSTNFYISNLDVITDSYFGADEIVSKLVQHLAGTGRVIIMDNWFSSYTLIEKLKLEYSLFCLGALKQNDECIPPFFVSRNRMAKPVLVGYFDEGYTLTSQMTCKTKSVNVLTSDPKFYRKGLLNKSSAATEYKRNQSAVQVVDVLMHYYTTMQYTNSWMMSLFFTLLNIASINAQVIWSAYNTRDVVKRRLFIQELALSLMKTDASFPMSPVTQTILKCSPIAKTRKRCKLCAKTAKRDRRTKQFCVRCRSPICREHAVGVESEKDEEEDEDDELMEPAQQYNKVPSMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKINNKKTKTHMQPKLRLNPFNPKARLMPNPINHKMQFQKPMPTRIMPSRVVAPPKPLAIKNTKPVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEYLVSEPAIINSGPESPETLISEPEIASFQVETILSEPGFDQNHEEEEEADESLNQNQNYDTVDMESDHEIEIARQKENEVEMDENQVEHDEDEMQQDNENMDNTEGEMSDNENGNQEEDDEQGESQGDMIIDEHNEAQGEDGEGDNEEDNGDRDDDQDGNEENENDEDEDLPPGLAPVVEINEDMQTNSYNSEQNEEEEEELDESAANDNIDDDVKELDPDKVYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANVCTDLWKIIYNENGITDDLVMEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCSEKFVNMQDFNDHALHVHAGSFDPDNQNKCIDGRPTDCPLCGKKNSNYPNLVKHIKSAHNEDKPHYCQHCDAKFEQTPDLNKHIYAQHSDKVMGAQAMEPDMSIIKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQSHPGASAYAAAETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIRQFPMIQPGLVSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEDNTMQASTEEDEYNVDENGTALSTPQFNSFNFSNFANNVQQQQQQHQQQSTPTNDALPFSCELCYKRFPLKTSLWKHKRAKHGIINASATGNPENQAQPSSEGGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKAQEEVKIEYEPEPEINDPSAEYQARYPCDTCGKQFVGLLALQNHQCINQSAAEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLARVTHSTPTATPATTTKRRLPPEVEVTVVNPNKKMRSDDSMELEQQNSLTGTLEDRFCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSAIGQTAEDDMYGCDQCGTQYNSEAALRAHRARHHADDSNESEDDGNVPVAQPGEFTCGQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00325643; iTF_00156465; iTF_00155516;
90% Identity
iTF_00155516;
80% Identity
-