Basic Information

Gene Symbol
-
Assembly
GCA_907164935.1
Location
NC:11974551-12006928[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.5e-25 9e-22 77.7 0.0 1 89 15 101 15 101 0.95

Sequence Information

Coding Sequence
ATGGCCAAGATCCTCAACAAGGACCCCGTCACCTACGAGAGGGAGAGGGAAAACTTCCTGAAGGACCTCCGTCACTTTCATGAGACCAGAGGGACTCCGTTCAAGAAAATTCCTAAAGTCAGCGGAAAAGATATAGATCTGTATTTGCTGTACGTTGTCGTTACTGCTCATGGAGGATGGATAAGGGTTAACCTTCGGAACGAGTGGACATCGTTGTGCGAACAATTCCATCTACCGAAGGGTTGCGTGAATAGCGGGGTTGGCCTTAAACAAATTTACCTTAGGTATTTGGACAGGTACGAAAAGGTACATTTCCTGGGAGAGGATGGCCAACAagccgacgacgacgacgaggattCTAGACACAGAAAATGGTCTGCCAGGGCATTACACTCCGTTCCTCTTACTTATAATCATCATCAACACAACGTTGCAGAATCTCTTCGTGACTACAATGGCCTTTCGTCGGACCTCTACAAACCATCCAACTACGATAAGCTCGCACTCTCGCTCCTCTCCCCTCTTCCCAACGAGCAAGACTTTGCCATCAACGTTTGCACCTTATTGTCGAACGAGGGCAAACACATTTTACGTCTCGATAAGTATCCCCGGTTGGTGAACATTCTTCTCGCTCACGCGGGCGTTTTCGATTCGCCGGGCACGCGGCAACTCTTCATCGAGGTCTACTCTCGCGTAAGGAATTACTCGATCAACTCCTTTTGGTCGGACGTTCTCGACTCTCAGGACGTGATCGACCTGACGAACGAGAGGGCGTTCATGAAGAAACCGACTGCGAGTCCGCAAACGTTCTCTAGGCGGAAGATCTTAGAAAAAGAGAAGCAAAACAAAAGCACCGCCTCATCGACGACGGAGAACGATGATGCTTCTACGTCGATGGAAGTCGAAGGGGTACCTCAAGATTGTCCAAGATTGGATCCAACAGGGTCTCATCAAGATGACAATCTGAGAGGAGATCAGAACCAAAACTCCATAAAGTTTGAAGAAGAGGATAAAGACTTGTTTTGTGTTGGACGGACGCTGGGCACGCAAGATCCTTATGGTCAACGTGTCCTTCAGATAGCATCTATTTTGCGGAATCTAAGTTTTACACCGGAAAACGCAGCCGTATTAGGAAGGAATCGATGTTTCTTGAGATTTGTATTATTATGCGTGAGAGCAAGGTGGAGCAATTTACATCAACTTGGTTTTGACATACTAGGAAACATAGCGAATGAAATAATCTTAAAAGAGGCCGGTGAGAGGATAACAGATGTTGTGTTGTCATGTGTGGCAAAGGGAATTGAATCCCAAGACAGGTTCATTGTTATATCCTGCTTGGAGGTGCTTAATAAAATTAGCCAACAAGACAGTAATGAagaaattgttacatttggaTTAGAGGACAATGTATATGAACTTATATGCAGGTTTTTAGCTTTGAACGACATAGCTCTTTTAGTATATACCTTGGAATGTTTGTATGCTTTGACTTCTTTGGGTGAAAGACCATGTACTAGCGTCGCGCGGGTACGCGGAGCTATTGACACGTTAGTCGCCCTTGTTACTGTAGAAGCGCAAAGTTACGGACCGAAGGCTTGTATCTTGATGAGGGTAATCGAAACAGTGTCCACTGTAGCGGCACCACCGAACACTACTCAAAACACTCCGATCACCGCTACCGCACCAGCTGCGGCGACAGTCTCATCGTCTGTACCGTCTACTCCAGCTACAGTTACTGCAACACCAGCTCCCGTTAGCCCGGCACCTTCGCGACCTACTACTCCAGCTGCGACAGTAACAAAATCTACTACGCACAAAGCAGTCGAGGCAAATAATTCCATTCAACAGCACGCGCATCAACAAATCATACAGGAAAACGAGCAATTTGCTCTAAGTTGGTTAAGAGCTACCTTTGAACCTACACCAGGTGTACGTATAGAGCAAGAAGAATTGTACAAGAAATATCTCGGTTGCTGCACAAAAATCGGCAGGAGAGGCGTAATTGCTCCGCTTCATTTTCCAAGATGCGTTAGatCTGTATTTGGTGGAAGCGTCGGACCAAATCCGTTGAAAGGTGAAACAAGTGGTACTCAGTATTATGAAGGAATCAGAGTACGGGCAACACCTCCCCAAGTAACTTATCCGAGCCAAACTGCGGTTGGGACTAACACAGCTCCAATTACAGCAGTCAACGCAACGCCAGTAAAGGTGCTTCCCGTACAACAGCGTACAATCAAGAATATAAGTCCTGCTCCTGATAGCACGGCCCTAGACAATCCTGCATCTGGGCCTCCAAGAATTCCTGCCCCAGCATCGCCTATTCTGAAAGCCCAATTATCTGCCCCACCAAAACCACCCTCCAATACCTCAAACACTGTAAATCAATCCCAAAATCCAGTCACCAAGGTTGATTCTAAAAGTCAGGTGTCAGTATCGCATCCTCATCTGAGCCAAGCATTGCTGTCTAGTGGTTCGCAAATACAAACGCAGCAGCAACAGTTACAACAGCAACAACCGCAACAAGTACAACACCAGCCGCAGCAAGTACAACAGCAATCACAAACTATCCAGGTAGTTGCAAAGGAAGATAATCGAAGCGGTACCACGTCCAGTTCCATAATAAAAAGCCTTCTGGCTACTAAGGTAACGGTCAGCAGCGACTGCATGCCCAGTACTGCTGCGACTTGTGTGTCTACCCCTACTGCCTGTGTAACAAACACTACTGCTAGCATCGCATCCAGCATCAGTGCCAACCAGCTAATAACCAGCAACCAGGTTGCCCAACGCCAACAGCAACAGAGGTTACTGCAACAACAATTAATCAACGTATCACAGCCTCCAACAACTACAACATCAACAATACTCCCAAAGACTCCTGTTAACTCGAAACAAAAGCCAGCTATTACACCCATTCCTGccaaaaaaatacaaaggcTTAACGGAGCCAAATTTATTATGACTAACAATTGTGACAAGACTGAAGTAAGTGATAACGAAAATGTCAACCAAATAGCAACATCGACAACCTCTTCCATTGTGGTTTTAAATTCGACGGAAAATCACATATCTTCAACAATTAAAGTATGTCGGCCTCCATCTACAACTGTAACTACCGTGAACAAAACGAATCAGCGTTCTACTTGTACGTCCATTGCCGAAGATTCGGACTCGACGAATAATTCTTTGGCATCTAGTAGTGGTATCGGTGGTAGTAGGGATTGTTCTGGTGTCGGCGTGGAGGAAGATAATTCTTTAACGAGTTTCGAGGGAATTCTCTTGAACGGTGCACCGAGTAACATGGATATTGACGCACAGGATGATGGATCGTCAAAAGATTCGTCCAGTGTAATTTCTAAAGAGAAACCCTTGCAAAGTATGATGCTTGCGGATTTGTTGGAAAGAAAAGTCGATAAAGAACCGATTCTGAACGGTGTTTTAGGAAAGAATTCAATTAACGAGAAAGGCATGGATCTGGTAGAAAACCACATCAAGAAAGTACTAAAAGAATCTCCTACCGACATTAAAGTGAAACTCGAAGTAGAGGAAAGTAATGTCGTACAAACAGAAGTATCCGAAGATACCTTAATTGAAGCACCGAGAGGGATAAAACGTGCCGCGAGTGAATCCGACGAGGTAGATGTAAAAAAGGTTAAATATTCCAACGGTACAATGTCCCCGGATCCTGCTGTTGATTCGACAACGGCTGAATCTACCGTCTCGAGTATCAAATCTGAGGAACAAGACGATGACAAGGATAGCGAAAAGGCAACTGTGTCCTCCACTGCTGCTAATCTTTATGCTGCTTTAGCTGCTGATTGTATAGAAGATGAAACTGATCTTGACGATAATATCAATGTAAATGCTAGTACAGGAACATCTCCCGCGATAAAAGAGGAACCTCATATATTCGTAAATCAAATCAatcaacaacaacaacaacttcaacaacagcagcagcaaaaacagcagcagcagcaactgCAGCTTCAACAACAGttacagcagcagcagcagcaacaacaacaacagcagcagcagcagcagcaacatcAGCAGCAACATCAtcaccatcatcatcatcaccaCCATCAGTTACAACAACCTCAACAGACACAGACACAACTCCAACAGCAACAACATCAACATCAGCAACTTATTGTCGCAGCTTCTAGGCAAATAGTAGTACAACAAACAATCCAACCAAATAATCAAGTTATTATACCAGCTGGTCAAGTGAAGGGAAGGCAGGCACAACCACAGCCACAGGTTCTGCTGCAGCAAGGAGCAGGAGGTCAATTACAATACGTCGTTTCCGGTGGTGTTCCTGGTCAAAATTATGTTTTAGCTCAACCGCAAACGACGCTGGTTCAGGGTCAGGCGCAAACTGTTCTAGTGGCTCAAACTACTCAGCAACAAGGAACAGGCGcaaaaacaataattattttgcaaCCTCAAGCAGCTGCTCAGCCGACCCAACAGAAAATGGTAGCGGTTACGCCGCAGGGACAGCAGGTTGTCGTAACGCAAGTTTCGCGTCCCATCTTACAAAGTCCCGCTCTCGGCAACATACCTCCGCCTCTCGTTCCAACATCAGGCACAATTCCACAAACTTCCATAATAGTGAACAGTTCTGTAGCACAAACAAATCCAAATACAGTGACTGTCACGATACCCGCGATGGCTCAACAAACGCCGGTCTCTACGAGCGTGCCATCGAGGGTAGTGACGCCCACACCAGCCTCGACTCCACCACCTACCAGACCCACGACACCGCATCAAGCAGCTGCGACGCACGGATTGCCAGCGAAACAACCTGCTAAATTAATAAAGACTGTTAGTTCTTCGACCTCCACGGAGCCAGAATCCAAGCCGTCGACGAGTCAAAATCAACCGGAAAAAACTATTACGATAAAGATCGATCCTAATGCTTATTTATGCGAATGGCGAGGTTGTCTAAGGCAATTTAAAACACCACACGAAGTTTACCTTCACGTGTGCGAAGCACATTGTCCAACCGGGGGAGAAGAAATATTATGCCTTTGGGCAAGTTGCGATGCCTTGAAAAGGCGTAGATTCTCATTAATGACACATTTATACGACAGGCATTGCAACGCGGAAACTATGTCGATGAGAAGAAAACAGTTAACGGTAACTGGAAAAACGGAAGTTTCCACATCGACACCGCCGACTCCTCATCATCCTGGATATGCACCAAACGCAGCATTCCATGCAATTAAACGGCACGCTTTGGAATTCGTAAATCCGAAGGAATTAATGCAAAGGCCAACCAAGCCCGCTGCAGCCACCTCAAGCTCTTCTTCCCCCAGACCTGGGCAAAATCCTCCACCAGAACAGGACGACAACGAAGGTCCAGTGACTAAAAGTATTCGTTTGACAGCCGCTCTTATTCTCAGAAACCTAGTCATATATTCAACACATGGCAGAAGGCATCTTAGAGCGTATGAACCACATTTGGCAGGTGTGGCGTTAAGTAACGTTGAATCATCGAGAACAATCGCACAAGTTCTATACGATATGAATGATCAAAGCAACAGTAACCATAGGTGA
Protein Sequence
MAKILNKDPVTYERERENFLKDLRHFHETRGTPFKKIPKVSGKDIDLYLLYVVVTAHGGWIRVNLRNEWTSLCEQFHLPKGCVNSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDDDEDSRHRKWSARALHSVPLTYNHHQHNVAESLRDYNGLSSDLYKPSNYDKLALSLLSPLPNEQDFAINVCTLLSNEGKHILRLDKYPRLVNILLAHAGVFDSPGTRQLFIEVYSRVRNYSINSFWSDVLDSQDVIDLTNERAFMKKPTASPQTFSRRKILEKEKQNKSTASSTTENDDASTSMEVEGVPQDCPRLDPTGSHQDDNLRGDQNQNSIKFEEEDKDLFCVGRTLGTQDPYGQRVLQIASILRNLSFTPENAAVLGRNRCFLRFVLLCVRARWSNLHQLGFDILGNIANEIILKEAGERITDVVLSCVAKGIESQDRFIVISCLEVLNKISQQDSNEEIVTFGLEDNVYELICRFLALNDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVIETVSTVAAPPNTTQNTPITATAPAAATVSSSVPSTPATVTATPAPVSPAPSRPTTPAATVTKSTTHKAVEANNSIQQHAHQQIIQENEQFALSWLRATFEPTPGVRIEQEELYKKYLGCCTKIGRRGVIAPLHFPRCVRSVFGGSVGPNPLKGETSGTQYYEGIRVRATPPQVTYPSQTAVGTNTAPITAVNATPVKVLPVQQRTIKNISPAPDSTALDNPASGPPRIPAPASPILKAQLSAPPKPPSNTSNTVNQSQNPVTKVDSKSQVSVSHPHLSQALLSSGSQIQTQQQQLQQQQPQQVQHQPQQVQQQSQTIQVVAKEDNRSGTTSSSIIKSLLATKVTVSSDCMPSTAATCVSTPTACVTNTTASIASSISANQLITSNQVAQRQQQQRLLQQQLINVSQPPTTTTSTILPKTPVNSKQKPAITPIPAKKIQRLNGAKFIMTNNCDKTEVSDNENVNQIATSTTSSIVVLNSTENHISSTIKVCRPPSTTVTTVNKTNQRSTCTSIAEDSDSTNNSLASSSGIGGSRDCSGVGVEEDNSLTSFEGILLNGAPSNMDIDAQDDGSSKDSSSVISKEKPLQSMMLADLLERKVDKEPILNGVLGKNSINEKGMDLVENHIKKVLKESPTDIKVKLEVEESNVVQTEVSEDTLIEAPRGIKRAASESDEVDVKKVKYSNGTMSPDPAVDSTTAESTVSSIKSEEQDDDKDSEKATVSSTAANLYAALAADCIEDETDLDDNINVNASTGTSPAIKEEPHIFVNQINQQQQQLQQQQQQKQQQQQLQLQQQLQQQQQQQQQQQQQQQQHQQQHHHHHHHHHHQLQQPQQTQTQLQQQQHQHQQLIVAASRQIVVQQTIQPNNQVIIPAGQVKGRQAQPQPQVLLQQGAGGQLQYVVSGGVPGQNYVLAQPQTTLVQGQAQTVLVAQTTQQQGTGAKTIIILQPQAAAQPTQQKMVAVTPQGQQVVVTQVSRPILQSPALGNIPPPLVPTSGTIPQTSIIVNSSVAQTNPNTVTVTIPAMAQQTPVSTSVPSRVVTPTPASTPPPTRPTTPHQAAATHGLPAKQPAKLIKTVSSSTSTEPESKPSTSQNQPEKTITIKIDPNAYLCEWRGCLRQFKTPHEVYLHVCEAHCPTGGEEILCLWASCDALKRRRFSLMTHLYDRHCNAETMSMRRKQLTVTGKTEVSTSTPPTPHHPGYAPNAAFHAIKRHALEFVNPKELMQRPTKPAAATSSSSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSTHGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSNSNHR