Basic Information

Gene Symbol
Arid2
Assembly
GCA_000220905.1
Location
NW:581562-631380[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7e-25 6.7e-22 76.9 0.0 1 89 15 101 15 101 0.95
2 2 7 1e+04 -6.9 3.3 57 60 1333 1336 1312 1355 0.47

Sequence Information

Coding Sequence
ATGGCCAAGATCCTCAACAAGGACCCCGTCACCTACGAGAGGGAGAGGGACAACTTCCTGAAGGACCTCCGCCACTTTCATGAGACCAGAGGGACTCCGTTCAAGAAAACTCCTAAAGTCAACGGAAAAGATATAGATCTGTATTTGCTGTATGTTGTGGTTACTGCTCATGGAGGATGGATAAGGGTTAATAGCAGGAACGAATGGACGTTGTTGTGCGAACAATTCCATCTACCCAAGGGTTGCGTGAACAGCGGGGTTGGTCTTAAACAAATTTACCTTAGGTATTTGGACAGGTACGAAAAGGTACATTTCCTAGGAGAGGATGGCCAACAAgccgacgacgacgacgaggacTCTAGACACAGAAAATGGTCTGCCAGGGCATTACACTCTGTTCCTCTTACTTATAATTATCATCAACATAATGTTGCAGAATCTCTTCGCGAATACAACGGCCTTTCGTCGGATCTCTACAAACCATCCAACTACGATAAGCTCGCACTGTCGCTCCTCTCGCCTCTTCCTAACGAGCAAGACTTCGCCATCAACGTTTGCACGTTACTTTCCAACGAAGGCAAACACATTTTACGTCTCGATAAGTATCCCCGGTTGGTGAACATTCTTCTCGCTCACGCGGGCGTCTTCGACTCGCCGGACACCCGGCAACTCTTCATCGAGGTCTACTCCCGCGTAAGGAATTACTCGATTAACTCCTTCTGGTCGGATGTTCTCGACTCTCAGGACGTGATAGACCTGACGAACGAGAGGGCGTTCATGAAGAAACCGACTGGCAGCCCGCAGACGTTTTCTAGGCGGAAAATATTGGAGAAAGAGAAGCAGAACAAAAGCATCACCGCAGCGGCGACGGAGAACGATGAGGCTTCTACGTCCATGGAAGTCGATGGGGTACCTCAAGATTGTCCAAGGTTAGATCCAACAGGGTCCCATCAGGATGACAATTTGAAAGATCAGAACCAAAACTCCATAAAGTTCGAAGAAGAGGATAAAGACTTGTTTTGTGTTGGTCGGACTCTGGGAACGCAAGATCCTTACGGCCAACGAGTGTTGCAGATAGCATCTATTTTGCGGAATCTAAGTTTTACACCCGAGAACGCAGCTGTATTAGGGAGGAATCGATGTTTCTTGAGATTCGTATTATTATGCGTGAGAGCAAGGTGGAGCAATTTGCATCAGCTTGGTTTTGACATACTAGGAAACATAGCGAATGAAATAATCTTAAAAGAGGCTGGTGAGAGGATAACGGATGTTGTGTTGTCATGTGTGGCAAAGGGAATTGAATCCCAGGACAGGTTTATTGTTATATCCTGCTTGGAGGTGCTTAATAAAATTAGCCAACAAGACAGTAATGaagaaattgttacatttggATTAGAGGACAATGTATATGAACTTATATGCAGGTTTTTAGCTTTGAACGACATAGCCCTTTTAGTGTATACCTTGGAATGTTTGTACGCTTTGACTTCTTTGGGTGAAAGGCCATGTACTAGCGTCGCGCGGGTACGCGGAGCTATTGACACATTAGTCGCCCTTGTTACTGTAGAAGCGCAGAGTTATGGACCGAAGGCTTGTATTTTGATGAGGGTAATCGAAACAGTGTCCACTGTAGCTGTACCGCCGAGTACTACTCAAAACTCTCCGGTCACCGCTGCCGCGCCAGCTGCAACGGTGGCCTCGTCCGTACCAACCACTCCAGCTACAGTTACCGCAACACCAGCTCCCGTTAGTCCGGCACCTTCGCGACCGACAACTCCAGCTGCAACGACAACGAAGTCTACTACGCACAAAGCAGTGGAGACAAATAATTCGATTCAGCAACACGCGCACCAACAAATCATCCAGGAGAACGAACAGTTTGCTTTAAGTTGGTTAAGAGCTACTTTTGAACCCGCAGCGGGTGTGCGTATAGAGCAGGAAGAATTGTATAAGAAATATCTGGGTTGCTGCACAAAGATTGGTAGGAGAGGCGTAATTGCTCCGCTTCACTTTCCAAGATGTGTTAGATCTGTATTTGGTGGAAACGTCGGGCCGAGTCCATTGAAAGGCGAAACAAGTGGTACTCAGTATTATGATGGAATCCGAGTACGGGCCACACCTCCCCAAGTAACTTATCCGAGCCAAACTGCAGTTGGGACTAACACAGCTCCAATTACAGCAGTCAACGCAACGCCAGTAAAGGTGCTTCCCGTACAACAGCGTACAATCAAGAGTATAAGTCCTGCTCCTGATAGCACGGCCCTAGACAATCCTGCATCTGGGCCTCCAAGAACTCCTGCCCCAGCATCACCTATCCTAAAAGCCCAATTATCTGCCCCACCAAAACCACCTTCCAACACCACAAACACTGTAAatcaatcccaaaatccagTCACCAAGGTTGATTCTAAAAGTCAGGTGTCAGTATCGCATCCTCATTTGAGCCAAGCGTTGCTGTGTAGTGGTACACAAACACAGACACctcagcagcagcaacaacagttGCAACAGCAATCGTCACAGTTACAACCGCAACACCATCCTCAACAACCGCAGCAAGTACAACAACAGTCGCAAGCTGTCCAGGTAGTTGCAAAAGAAGATAATCGAAGTGGTACCACGTCCAGTTCCATAATAAAAAGCCTTCTGGCTACTAAGGTAACGGTCAGCAGCGACTGCATGCCCAGTACTGCTGCGACTTGTGTGTCTACCCCTACTGCCTGTGTAACAAACACTACTGCTAGCATCGCATCCAGCATCAGTGCCAACCAGCTAATAACCAGCAACCAGGTTGCCCAACGCCAACAGCAACAGAGGTTACTACAACAGCAATTAATCAACGTATCGCAACTTCCTGTGACAACAGCTTCTTCAACGATACTCCCAAAGACTCCTGTCAACTCGAAACAAAAACCAGCTATTACACCCATTCCTGCCAAAAAGATACAAAGGCTTAACGGAGCCAAATTTATTATGACTAATAATTGTGACAAGACTGACGTAAGTGATAATGAAAATGTCAACCAAATAGCAACATCGACAACCTCTTCCATTGTGGTTTTAAATTCGACGGAAAATCACATATCTTCAACCATCAAAGTATGTCGGCCTCCAACTACAACTGTAACTACAGCAAATAAAACAAATCAGCGTTCTACGTGTACGTCCATTGCCGAAGATTCGGATTCGACAAATAACTCTTTGGCATCTAGTAGTGGTATAGGTGGTAGTAGGGACTGTTCTGGTGTTGGCGTGGAGGAAGATAACTCGTTAACAAGTTTCGAAGGAATACTTTTGAACGGTGCACCAAGTAACATGGACATTGATGCCCAGGACGATGGCTCCTCGAAAGATTCGTCCAGTGTAATTTCTAAAGAGAAACCTTTGCAGAGTATGATGCTTGCAGATTTGTTAGAAAGGAAAGTCGACAAGGAACCCATTTTGAACGGGGTCTTAGGAAAGAATTCCATCAACGAGAAAGAAATGGATCTAGTAGAAAACCACATTAAAAAAGTACTAAAAGAATCTCCTACCGACATTAAAGTGAAATCTGAAGTAGAGGAAAGTAACGTTGTACAAACAGAAGTGTCCGAGGACACCTTAATAGAAGCACCAAGAGGGATTAAACGTGCCGCTAGCGAATCCGACGAAGTggatgttaaaaaattgaagtattcgAACGGCACGATGTCTCCGGATCCTGCTGTTGATTCGACAACGGCTGAATCCACCGTCTCGAGCATAAAATCTGAGGAACAAGACGATGACAAGGATAGTGAAAAGGCAACTGTGTCCTCCACTGCCGCAAACCTTTATGCTGCTTTAGCTGCGGATTGTATAGAAGATGAAACGGATCTTGAGGAAAATATCACTGTAAATGCCAGCACAGGAACATCTCCTGTAGTAAAAGAAGAACctcatatatttgtaaatcaaATGAaccaacaacaacagcaacttcaacagcagcagcaaaaacagcagcaacaacagttACAATTACAGCAGCAAttgcaacaacaacagcaacagcaaccacagcaacaacaacaacctCAACAGCATCAACAACTCATCGTCGCAGCTCCTAGGCAAATAGTAGTACAACAAACGATTCAACCAAATAATCAAGTCATTATACCAGCTGCGCAAATGAAGGGAAGGCAGCCGCAAGCCCAGCCACAGGTTTTGCTGCAGCAAGGAGCTGGAGGTCAATTACAGTACGTCGTTTCCGGTGGTGTTCCTGGCCAAAATTACGTTTTAGCTCAACCACAAACGACGTTGGTTCAAGGTCAAGCGCAGACGGTTTTAGTGGCTCAAACGACTCAGCAACAAGGAACGGGTGCAAAAACAATAATCATTTTGCAACCTCAAGCAGCTGCCCAACCGACGCAACAGAAAATGGTGGCAGTAACGCCCCAAGGGCAGCAAGTTGTCGTGACGCAAGTTTCACGACCCATCTTGCAGAGTCCCGCCCTTGGCAATATACCTCCGCCGCTTGTTCCAACGTCTGGCACAATCCCACAAACTTCCATAATAGTGAACAGTTCTGTAGCACAAACAAACCCGAATACAGTGACTGTTACGATCCCTGCGATGGCTCAACAAACACCAGTATCCACCAGCGTGCCATCAAGAGTAGTTACACCTACACCAGCCTCAACTCCACCACCTACCAGACCCACTACACCGCATCAAGCAGCTGCCACGCACGGATTGCCGACGAAACAACctgcaaaaataatgaagactGTTAGTTCCTCAACCTCTACGGAGCCAGAATCTAAACCGTCGACGAGTCAAAATCAACCGGAAAAGACGATTACGATAAAAATCGATCCGAATGCTTATCTGTGCGAATGGCGAGGTTGTCTAAGgcAATTTAAAACACCGCATGAAGTGTACCTCCATGTGTGCGAAGCACATTGTCCAACTGGGGGAGAAGAAACGTTGTGTCTATGGGCAAGCTGCGATGCCTTGAAAAGGCGTAGATTTTCGTTAATGACACATTTGTACGATAGGCATTGTAACGCGGATACTATGTCGATGAGAAGGAAACAGTTGACGGTAACCGGGAAAACGGAAGTTTCCACATCGACGCCACCAACTCCTCACCACCCTGGATATGCACCGAATGCAGCATTCCACGCGATTAAACGGCATGCTTTGGAATTCGTAAATCCAAAGGAGTTAATGCAAAGGCCAACCAAGCCCGCTGCAGCCACCTCAAGCTCTTCTTCCCCCAGACCAGGGCAAAATCCTCCACCAGAACAGGATGACAACGAAGGTCCAGTGACTAAAAGTATTCGTTTGACAGCCGCTCTTATTCTCAGAAACCTAGTCATATATTCAACACATGGCAGAAGgcATCTCAGAGCGTACGAACCACATTTGGCAGGTGTCGCGTTAAGTAATGTTGAATCGTCGAGAACAATCGCACAAGTTCTATACGATATGAACGATCAAAGTAACAGTAACCATAGGTGA
Protein Sequence
MAKILNKDPVTYERERDNFLKDLRHFHETRGTPFKKTPKVNGKDIDLYLLYVVVTAHGGWIRVNSRNEWTLLCEQFHLPKGCVNSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDDDEDSRHRKWSARALHSVPLTYNYHQHNVAESLREYNGLSSDLYKPSNYDKLALSLLSPLPNEQDFAINVCTLLSNEGKHILRLDKYPRLVNILLAHAGVFDSPDTRQLFIEVYSRVRNYSINSFWSDVLDSQDVIDLTNERAFMKKPTGSPQTFSRRKILEKEKQNKSITAAATENDEASTSMEVDGVPQDCPRLDPTGSHQDDNLKDQNQNSIKFEEEDKDLFCVGRTLGTQDPYGQRVLQIASILRNLSFTPENAAVLGRNRCFLRFVLLCVRARWSNLHQLGFDILGNIANEIILKEAGERITDVVLSCVAKGIESQDRFIVISCLEVLNKISQQDSNEEIVTFGLEDNVYELICRFLALNDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVIETVSTVAVPPSTTQNSPVTAAAPAATVASSVPTTPATVTATPAPVSPAPSRPTTPAATTTKSTTHKAVETNNSIQQHAHQQIIQENEQFALSWLRATFEPAAGVRIEQEELYKKYLGCCTKIGRRGVIAPLHFPRCVRSVFGGNVGPSPLKGETSGTQYYDGIRVRATPPQVTYPSQTAVGTNTAPITAVNATPVKVLPVQQRTIKSISPAPDSTALDNPASGPPRTPAPASPILKAQLSAPPKPPSNTTNTVNQSQNPVTKVDSKSQVSVSHPHLSQALLCSGTQTQTPQQQQQQLQQQSSQLQPQHHPQQPQQVQQQSQAVQVVAKEDNRSGTTSSSIIKSLLATKVTVSSDCMPSTAATCVSTPTACVTNTTASIASSISANQLITSNQVAQRQQQQRLLQQQLINVSQLPVTTASSTILPKTPVNSKQKPAITPIPAKKIQRLNGAKFIMTNNCDKTDVSDNENVNQIATSTTSSIVVLNSTENHISSTIKVCRPPTTTVTTANKTNQRSTCTSIAEDSDSTNNSLASSSGIGGSRDCSGVGVEEDNSLTSFEGILLNGAPSNMDIDAQDDGSSKDSSSVISKEKPLQSMMLADLLERKVDKEPILNGVLGKNSINEKEMDLVENHIKKVLKESPTDIKVKSEVEESNVVQTEVSEDTLIEAPRGIKRAASESDEVDVKKLKYSNGTMSPDPAVDSTTAESTVSSIKSEEQDDDKDSEKATVSSTAANLYAALAADCIEDETDLEENITVNASTGTSPVVKEEPHIFVNQMNQQQQQLQQQQQKQQQQQLQLQQQLQQQQQQQPQQQQQPQQHQQLIVAAPRQIVVQQTIQPNNQVIIPAAQMKGRQPQAQPQVLLQQGAGGQLQYVVSGGVPGQNYVLAQPQTTLVQGQAQTVLVAQTTQQQGTGAKTIIILQPQAAAQPTQQKMVAVTPQGQQVVVTQVSRPILQSPALGNIPPPLVPTSGTIPQTSIIVNSSVAQTNPNTVTVTIPAMAQQTPVSTSVPSRVVTPTPASTPPPTRPTTPHQAAATHGLPTKQPAKIMKTVSSSTSTEPESKPSTSQNQPEKTITIKIDPNAYLCEWRGCLRQFKTPHEVYLHVCEAHCPTGGEETLCLWASCDALKRRRFSLMTHLYDRHCNADTMSMRRKQLTVTGKTEVSTSTPPTPHHPGYAPNAAFHAIKRHALEFVNPKELMQRPTKPAAATSSSSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSTHGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSNSNHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01122221;
80% Identity
-