Basic Information

Gene Symbol
Arid2
Assembly
GCA_014083535.1
Location
JACHAV010000050.1:914933-944732[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-26 5.1e-23 80.8 0.0 1 89 15 101 15 101 0.95
2 2 8 1.2e+04 -6.4 4.1 55 81 1291 1318 1282 1323 0.44

Sequence Information

Coding Sequence
ATGGCCAAGATCCTCGACAAGGACCCCGTCACCtacgagagggagagggaaaactTCATGAAGGACCTCCGGCATTTCCACGAAACCAGAGGAACGCCATTTCGGAAGTCACCGAAAATCAGTGGGAAGGAGATAGATCTGTATTTGTTGTATGTCGTCGTTACCGCCCGTGGTGGATGGATAAAGGTGAATACCAGAAATGAATGGGCCTCGCTATGCGAACAATTTCATCTGCCAAACGGCTGTGTCAACAGTGGAATCGGTCTTAAACAAATATACCTTCGATATCTAGACAGGTACGAAAAGGTTCATTTCTTAGGAGAAGATGGGCAGCAAGCCGATGATGAAGACGAAGATTCCAGACACCGGAAGTGGTCTGCCAGGGCATTACATTCAGTTCCTCTTacgtataatcatcatcaacatAATGTTGCAGaatCTCTTCGCGATTACAATGGTCTTTCGTCCGATCTTTACAAACCATCCAACTACGACAAATTGGCATTATCGCTTCTTTCGCCTCTTCCAAACGAACAAGACTTCGCAATCAATGTTTGCACGCTTTTGTCGAACGAAGGAAAACATACGTTACGTCTTGATAAGTATCCACGTTTGGTGAATATCCTGCTCGCGCATGCTGGCGTTTTCGACTCGCCTGGTACGCGACAACTTTTCATTGAGGTTTATTCTCGTGTGAGGAATTATTCTATCAATTCGTTTTGGTCGGATGTACTCGATTCGCAAGACGTGATAGACCTTACGAACGAGAAAACCTTTATGAAGAAGCCATCAACGAGTTTACACACATTCTCCAGGCGGAAAacattagagaaagagaagcaaaaTAAAGTGACAGTAACGGTCCAAGACAACGAGGAGACGGTCACGTCGATGGATGTGGATGGGGTGCTTCCAGACTGTTCACGTCTAGATCCTATTGGTTCTCATCAAGATGAGAATTTTAAAGATCAGAATCAAAATTCGATAAAGTTCGAAGAAGAGGATAAAGACTTGTTTTGCGTCGGTAGAACGTTAGGCACGCAGGATCCGTACGGTCAACGCGTGTTACAGATAGCGTCTATCTTACGAAATCTCAGTTTCACTCCGGAGAATGCCGCGGTGCTAAGcaggaatcgatgttttttgagattcgttttattatgtataagaGCAAGGTGGAGTAATTTGCATCAACTTGGTTTCGATATACTAGGGAATATAGCAAacgaaatcattttaaaagagGCTGGCGAAAGGATAACAGATGTTGTCCTGTCTTGTGTGGCAAAAGGTATCGAGTCGCAAGATAGATTTATCGTTATATCCTGTTTAGAGGTGCTTAATAAGATCAGTCAACAGGATAGTAACGAAGAAATCGTTACGTTTGGATTGGAAGATAGCGTCTATGAACTTATTTGCAggtTTTTAGCTCTAAGTGATATAGCTCTTTTAGTTTATACTTTGGAGTGTTTATACGCTTTAACTTCGTTGGGCGAAAGACCGTGTACTAGTGTCGCGCGGGTACGTGGAGCTATCGATACATTGGTCGCGCTTGTCACCGTCGAAGCACAGAGTTATGGCCCAAAAGCTTGCATTTTGATGAGAGTGGTAGAAACTGTATCTACTATACCCACACCTTCGAATACGTCTCAGAATACtcctgttgctgctgctgccacTACTCCGGTTGCGTCAGTAACATCATCACCCGTGCCAGCTACTCCAGCTACGATTACCGCAACGTCGGCTCCAGTTAGCCCAGCACCTTCTAGACCTAATACACCTGCAACTACAACCAAGTCCACAACGCACAAAACAGTAGAGACGGCTAATGCGCTTCAACAACAACACGCTCATCAACAAATCATTCAGGAAAACGAGCAATTCGCTTTAGGATGGTTAAGAGCTACCTTTGAACTTGCACCAGGTATACGCATAGAACAAGAGGAACTCTACAAAAAATATCTCGGGTGTTGTACGAAGATTGGCAGAAGAGGAGTAATCGCGCCACTTCATTTTCCCAGATGTGTTAGgtCAGTGTTCGGGGGAACTATTGGTCCAAATCCACTCAAAGGAGAATCAACTGGTACTCAGTATTACGAAGGCATCCGTGTACGGACTACACCAGGCCAAGTAACTTATCCGAGCCAAACTGTAATTGCGACTAATACAGCTCCGATATCAGCGGTCAACACAACTCCAGTAAAGGTGCTTCCCGTACAACAGCGTACAATCAAGAATATAAGTCCTGCTCCCGATAGCACGGCCCTAGACAATCCTGCATCTGGAGTTCACAGAATTCCAGCCCCTGCATCTCCCATTCTAAAAGCCCAGTTGTCTGCCCCTCCAAAACCACCTTCCATTACGTCAAATCAATCCCAAAATCCAGTCACCAAGGTTGATTCTAAAAGTCAGGTATCAGTATCTCACCCCCACCTGAGTCAAGCATTGCTGGCCAGTGGATCCCAAaatcagcagcagcagcagcagcactcCCAATCTGTCCAAGTAGTAACAAAAGAAGATAACCGAAGTAGTACTACATCCAGTTCTATAATAAAAAGCCTTTTGGCTACCAAGGTAACAGCCAGCAGTGACTGCATGTCCAGTGCTGCTGCAACTTGTGTGTCTACCCTTACTGCCTGTGTAACAAACACTACTACTAGCATCGCATCCAGCATCAGTGCCAACCAGCTAATAACAAGCAACCAGGTTGCACAACGTCAACAACAGCAAAGGTTACTGCAACAGCAATTAACAGGTGTGGTACAACCTGCAGCTCCTGCAGCTACACCAGCAACAATACTCCCTAAAGTTTCTGTGAACTCTAAACAAAAACCAGTGATTGCAGCTATTCCTGCCAAAAAAATACAGAGACTTAATGGAGCTAAATTTGTTTTGACCAACAATTGTGAGAAGacTGAAgtaaatgatgtaaatgaaAGTGTCAACCAAATCGTAACCTCAACTACAGTAATTTTGAATTCAACTGAGAATCACATATCCTCGATCGTAAAAGTTTGTCAACCACCGACCTCTACTACAATTTGTACAAACAAGTCCAATCAACGAAGTACGTGTACTTCGATTGCTGAAGATTCTGATTCAACGAACAATTCTTTGGCTTCTAGTAGTGGTATAGGTGGTAGTAGAGATTTTTCCGGTGCTGGTGCTGAAGAAGATAATTCTTTAACGAGTTTTGAAGGAATACTTTTAAATGGTGCACCAactaatatagatattaatgcACAAGATGATGGATCATCCAAAGATTCATCTAGCATAAGTTCAAAGGAGAAACCATTGCAGAGTATGATGTTGGCTGatttattagaaagaaaggTAGATAAAGAGCCTATTTTAAATGGAGTTCTTGGAAAGAATTcaataaacgaaaaaggaatagatttggttgaaaatcatattaaaaaggTATTAAAAGAATCTCCGactgatattaaaataaaaaatgatataacagAAAGTAATACCATGCAGACTGAAGTATCTGAGGATACATTAATTGAAGCTCCtagaggaataaaaagagcAGCTAGTGAATCTGATGAGATAGATGCAAAAAAACCAAAATATTCTAATGGCACTACATCGCCTGATCCTGCTGTTGATTCAACAACTGCTGAATCTACTGTATCCAGTATAAAATcggaagaacaagaagatgACAAAGACAGTGAGAAAGCAACAGTTTCATCTACTGCTGCAAATCTTTATGCAGCTCTTGCTGCTGATTGCATAGAAGATGAAACTGATCTTGATGAACAAGTGAACATTAATAAGGAAGAACCTTCTCCAGTCGTGAAAGAAGAACCtcacatatttattaatcaaattactcaacaacaacagcaacagcatcaatcacagcaacagcagcagcaacaaccacagcaacaacaacagcaacatcaACAACATCTGCAGCAACATCACCAACATccacagcagcagcaacatcatcatcatcatcagcatcagcaGCCGCAACAACATCATCAGCAACATCAGCAGCATCAACAACAGTTAATAGTAGCGACTCCTCGACAAATAGTCGTTCAACAAACAATTCAGTCAAACAATCAAGTTATAATTCCTGCTGCGTCCGTCAAAGGAAGACAAGCACAAGCACAGCCACAAGTTCTGTTACAACAAAGTGCGGGAGGGCAACTGCAATATGTCGTATCTGGTGGTGTTCCTGGACAAAACTATGTGTTGGCTCAACCACAAACAGCTTTAGTACAAGGACAAGCACAGACGGTTCTTGTTGCTCAGACAACTCAACAACAAGGCACTGGCACGaaaactattataattttacagcCACAAGCTGCTCCTCAACCAACACCACAAAAAATGGTAGCTGTTACACCTCAAGGACAACAAGTTGTTGTAACTCAAGTTCCACGTCCTATTTTACAAAGTCCAgctcttggaaatattcctcCTCCGTTGGTACCTACGTCAGCCACAATTCCACAGACTTCCATAATAGTTAATAGTTCTGTAGCACAAACTAATCCAAATACTGTAACCGTTACGATACCTGCGATGGCTCAACAGAATCCAGTGTCTGCTAGTGTACCATCGAGGGTCGTAACACCGACTCCTGCTTCGACTCCACCACCGACAAGACCAACTACTCCTCACCAAGCAGCAGCGACACATGGACATTTAGTTAAACCACCAGTAAAGGCTATAAAAACTGTAAGTTCTTCGACTTCAACAGAACCAGAATCGAAACCTTCTACCAGTCAACTTCCACCTGAGAATaaaactattactattaaaatcgATCCTAACGCATATCTATGTGAATGGCGAGGATGTTTAAGGCAATTTAAAACTCCCCATGAAGTTTTTCTTCATGTGTGTGAAATTCATTGTCCAACTGGCGGAGAAGAAATATTGTGTTTATGGGGCAGTTGCGATGCTTTAAAGAGACGTCGATTCTCTTTAATGACACACTTATTCGATAGGCACTGTAATTCTGATGCAATGATCCTTAGAAGAAAACAATTAACCGTGACTGGAAAAACTGAAGTATCTACGTCCACTCCTCCAACGCCTCATCACCCTGGATATGCACCGAATGCAGCATTCCATGCCATTAAAAGACATGCTTTGGAATTCGTGAATCCTAAGGAATTGATGCAGAGGCCAACCAAGCCCGCTGCAGCCACTTCAAGCTCTTCTTCTCCCAGACCTGGGCAAAACCCTCCACCAGAACAGGATGACAACGAAGGTCCAGTGACTAAAAGTATTCGCCTGACGGCAGCTCTTATTCTCAGAAACCTAGTCATATACTCAACACATGGTAGAAGgCATCTTAGAGCATATGAACCTCATTTGGCAGGTGTGGCATTAAGTAATGTTGAATCATCAAGGACGATCGCACAAGTCTTATATGATATGAATGATCAGAGCAGTAGTAATCATAGGTGA
Protein Sequence
MAKILDKDPVTYERERENFMKDLRHFHETRGTPFRKSPKISGKEIDLYLLYVVVTARGGWIKVNTRNEWASLCEQFHLPNGCVNSGIGLKQIYLRYLDRYEKVHFLGEDGQQADDEDEDSRHRKWSARALHSVPLTYNHHQHNVAESLRDYNGLSSDLYKPSNYDKLALSLLSPLPNEQDFAINVCTLLSNEGKHTLRLDKYPRLVNILLAHAGVFDSPGTRQLFIEVYSRVRNYSINSFWSDVLDSQDVIDLTNEKTFMKKPSTSLHTFSRRKTLEKEKQNKVTVTVQDNEETVTSMDVDGVLPDCSRLDPIGSHQDENFKDQNQNSIKFEEEDKDLFCVGRTLGTQDPYGQRVLQIASILRNLSFTPENAAVLSRNRCFLRFVLLCIRARWSNLHQLGFDILGNIANEIILKEAGERITDVVLSCVAKGIESQDRFIVISCLEVLNKISQQDSNEEIVTFGLEDSVYELICRFLALSDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVVETVSTIPTPSNTSQNTPVAAAATTPVASVTSSPVPATPATITATSAPVSPAPSRPNTPATTTKSTTHKTVETANALQQQHAHQQIIQENEQFALGWLRATFELAPGIRIEQEELYKKYLGCCTKIGRRGVIAPLHFPRCVRSVFGGTIGPNPLKGESTGTQYYEGIRVRTTPGQVTYPSQTVIATNTAPISAVNTTPVKVLPVQQRTIKNISPAPDSTALDNPASGVHRIPAPASPILKAQLSAPPKPPSITSNQSQNPVTKVDSKSQVSVSHPHLSQALLASGSQNQQQQQQHSQSVQVVTKEDNRSSTTSSSIIKSLLATKVTASSDCMSSAAATCVSTLTACVTNTTTSIASSISANQLITSNQVAQRQQQQRLLQQQLTGVVQPAAPAATPATILPKVSVNSKQKPVIAAIPAKKIQRLNGAKFVLTNNCEKTEVNDVNESVNQIVTSTTVILNSTENHISSIVKVCQPPTSTTICTNKSNQRSTCTSIAEDSDSTNNSLASSSGIGGSRDFSGAGAEEDNSLTSFEGILLNGAPTNIDINAQDDGSSKDSSSISSKEKPLQSMMLADLLERKVDKEPILNGVLGKNSINEKGIDLVENHIKKVLKESPTDIKIKNDITESNTMQTEVSEDTLIEAPRGIKRAASESDEIDAKKPKYSNGTTSPDPAVDSTTAESTVSSIKSEEQEDDKDSEKATVSSTAANLYAALAADCIEDETDLDEQVNINKEEPSPVVKEEPHIFINQITQQQQQQHQSQQQQQQQPQQQQQQHQQHLQQHHQHPQQQQHHHHHQHQQPQQHHQQHQQHQQQLIVATPRQIVVQQTIQSNNQVIIPAASVKGRQAQAQPQVLLQQSAGGQLQYVVSGGVPGQNYVLAQPQTALVQGQAQTVLVAQTTQQQGTGTKTIIILQPQAAPQPTPQKMVAVTPQGQQVVVTQVPRPILQSPALGNIPPPLVPTSATIPQTSIIVNSSVAQTNPNTVTVTIPAMAQQNPVSASVPSRVVTPTPASTPPPTRPTTPHQAAATHGHLVKPPVKAIKTVSSSTSTEPESKPSTSQLPPENKTITIKIDPNAYLCEWRGCLRQFKTPHEVFLHVCEIHCPTGGEEILCLWGSCDALKRRRFSLMTHLFDRHCNSDAMILRRKQLTVTGKTEVSTSTPPTPHHPGYAPNAAFHAIKRHALEFVNPKELMQRPTKPAAATSSSSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSTHGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSSSNHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01122221;
90% Identity
iTF_01232208; iTF_01089779;
80% Identity
-