Basic Information

Gene Symbol
Arid2
Assembly
GCA_000188095.4
Location
NT:480769-542745[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-26 6.1e-23 80.2 0.0 1 89 15 101 15 101 0.95

Sequence Information

Coding Sequence
ATGGCCAAGATCCTCAACAAGGACCCCGTCACCTACGAGAGGGAGAGGGACAACTTCCTTAAGGACCTCCGTCATTTCCATGAGACCAGAGGGACTCCGTTCAAGAAAAATCCGAAAATCAATGGAAAAGATATAGATCTGTACTTGTTGTACGTCGTCGTTACTGCTCATGGCGGATGGATAAAGGTGAATACCAGAAACGAGTGGGCATCGTTATGCGAACAATTCCATCTACCCAACGGCTGCGTGAACAGCGGGGTTGGCCTTAAACAAATTTACCTCAGGTATCTGGACAGGTATGAGAAGGTACACTTTCTAGGAGAGGATGGCCAACAAgctgacgacgacgacgaggatTCTAGACACAGAAAGTGGTCTGCCAGGGCATTACACTCCGTTCCTCTTACTTATAATCATCATCAACACAATGTCGCAGaatctCTTCGTGATTACAATGGCCTTTCGTCGGACCTCTACAAGCCATCCAACTACGATAAACTCGCGCTGTCGCTTCTCTCGCCTCTTCCCAACGAACAAGACTTCGCCATCAACGTGTGCACGTTGCTGTCGAACGAAGGCAAGCACATCCTACGTCTCGACAAGTATCCCCGTCTCGTCAACATACTGCTGGCGCACGCCGGTATCTTCGACTCGCCCGGCACACGGCAGCTCTTCATCGAGGTCTATTCTCGCGTGAGGAATTACTCGATCAACTCGTTCTGGTCGGACGTTCTCGACTCCCAGGACGTGATAGATCTTACGAACGAGAGGACGTTTATGAAGAAACCAACCGCCAGTCCGCAGACCTTCTCCAGACGGAAAATCTTggagagagagaagcagaACAGAAACGCAGCGTCGACGGAGAACGACGAGGCTTCCACGTCGATGGAAGTCGACGGGGTGATACCAGACTGTCCAAGATTGGATCCAACCGGCTCGCATCAAGATGAAATTCTGAAAGATCAAAATCAAAACTCCATAAAGTTTGAAGAGGAGGACAAAGATTTGTTTTGTGTCGGACGGACGCTCGGAACGCAGGATCCTTATGGTCAACGTGTGCTACAAATAGCATCTATCTTACGGAATTTAAGTTTCACTCCGGAAAACGCCGCTGTATTAGGAAGAAATCGATGTTTCTTGAGATTCGTATTGCTCTGTGTGCGGGCAAGGTGGAGTAATTTGCACCAACTTGGTTTCGATATACTAGGCAACATAGCGAATGAAATAATCTTGAAAGAAGCTGGTGAAAGGATAACCGATGTTGTATTGTCGTGCGTAGCAAAGGGAATTGAATCCCAAGACAGGTTTATCGTTATTTCCTGCTTGGAGGTGCTTAACAAAATTAGCCAACAAGACagcaacgaagaaattattagGTTTGGATTAGAAGACAATGTATACGAACTTATATGCAGGTTTTTAGCCCTGAACGACATAGCTCTTCTGGTGTATACCTTGGAATGTTTGTACGCGTTGACTTCGTTAGGTGAAAGGCCATGTACCAGTGTCGCGCGCGTACGCGGAGCTATCGACACGTTGGTCGCTCTTGTTACCGTAGAAGCGCAAAGTTACGGTCCAAAAGCATGCATTCTGATGAGGGTAATCGAGACAGTGTCCACGGTAGCACCACCACCTAATGCTGCTCAGAACACTCCGGTTACCGCTACTGCCCCAGCTACGACAGTGTCCTCCTCTGTACCAACCACACCGGTTACAGTCACCGCGACACCAGCTCCTGTTAGTCCAGCACCGTCGCGACCAACGACACCAGCCGCCACTGCGACAAAATCTACGACACACAAAGCAGTGGAGACGAGTAATTCGCTTCAACAGCAGCACGCGCATCAACAAATCATACAGGAAAACGAGCAGTTCGCTCTCAGTTGGTTAAGAGCTACCTTCGAACCTGCGCTCGGCGTACGTATAGAACAGGAAGAGTTATACAAAAAGTATCTCGGTTGCTGCACAAAGATCGGTAGAAGAGGCGTTATTGCTCCGCTTCACTTTCCACGATGCGTTAGATCTGTATTTGGTGGAAGCGTCGGACCAAATCCGTTGAAAGGTGAAACAAGCGGTACTCAGTATTACGAAGGAATCCGAGTACGGGCCACACCTCCCCAAGTAACTTATCCGAGCCAAACTGCGGTTGGGACTAACACAGCTCCAATTCCAGCAGTCAACACAACGCCAGTAAAGGTGCTTCCCGTACAACAGCGTACAATCAAGAGTATAAGTCCTGCTCCTGATAGCACGGCCCTAGACAATCCTGCATCTGGGCCTCCAAGAACCCCTGCCCCAGCGTCACCTATCCTAAAAGCCCAATTGTCTGCTCCACCGAAACCACCATCCAGTATCTCGAACACTGCAACTCAATCCCAAAATCCAGTCACCAAGGTTGATTCTAAAAGTCAGGTGTCAGTGTCGCATCCTCACCTGAGTCAAGCGTTGCTGTCAAGTGGTTCCCAGACACAGCCTCAACCACAAGTCCAGCAAGTACAGCAACAGTGTCAAACGGTCCAGGTAGTTGCAAAGGAAGATAATCGAAGTGGTACCACATCCAGTTCCATAATAAAAAGCCTTCTGGCTACTAAGGTAACGGTCAGCAGCGACTGCATGCCCAGTACTGCTGCGACTTGTGTGACTACCCCTACTGCCTGTGTAACAAACACTACTGCTAGCATCGCATCCAGCATCAGTGCCAACCAGCTAATAACCAGCAACCAGgtTGCGCAACGTCAACAACAACAAAGGCTACTGCAACAACAGTTAACCAATATATCGCAACCACCTACAACTACGACTAGCGTAACCACAATACTCCCAAAGACTCCTGTCAACTCGAAGCAAAAGCCAGCTATCACACCCATTCCTGCCAAGAAGATACAAAGGCTCAACGGGGCCAAATTTATTATCACTAATAATTGTGACAAGACTGAAGTAAATGATAATGAGAATGTCAACCAAATCGTAACATCGACAACTTCTTCCACGGTGGTTTTGAACTCAACCGAAAATCACATATCGTCAACTATTAAAGTATGTCGGCCTCCAACTATAACCGTAACTACAGCAAACAAAGCGATCCAACGTTCGACTTGTACATCGATCGCCGAAGATTCAGACTCGACCAACAATTCTTTGGCATCCAGTAGTGGTATCGGTGGTAGTAGGGATTGTTCTGGTGTCGGTATAGAGGAGGACAATTCTTTGACGAGTTTCGAGGGAATTCTGTTAAACGGTGCACCAAGTAATATGGACATCGACGCGCAGGAAGATGGATCTTCGAAAGATTCGTCTAGTGTAACGTCTAAAGAAAAACCCCTGCAAAGTATGATGCTCGCAGATTTGTTAGAAAGGAAAGTTGACAAAGAGCCGATCTTAAACGGCGTGTTAGGCAAAAATTCAATCAATGACAAGGGAATGGACTTAGTAGAAAATCACATTAAGAAAGTACTAAAAGAATCTCCTActgacattaaaataaaatctgaagTAGAGGAGACGGAGGTCTCCGAGGATACTTTGATCGAAGCACCCAGAGGGATAAAACGATCTGCCAGCGAATTAGATGAAGTAGAtgtaaagaaagtaaaatattccaatggTACGATGTCGCCGGATCTTGCTGTTGATTCGACTACCGCCGAATCTACTGTCTCGAGTATAAAGTCTGAAGAACAGGACGATGATAAAGATAACGAGAAAGTAACCGTATCTTCTACAGCCGCGAATCTTTATGCTGCTCTGGCCGCGGATTGTATAGAAGACGAAACGGATCTTGACGAGAACGTTAATGTAAGTGTTAAGGAAGAACCTATTACTATAAAAGAACCTATCGCTATAAAGGAGGAACCTGTCAACACGATGAAAGAGGAACCTATCACGATAAAAGAGGAACCTCACATATTCGTCAATCAGCTTAATCAACAACCACCTCAACAGCAGCAGCCATCGCAACAGCAACCACAGCAGCAACCGCAACAGCCACCACCACAATCACAACACCCGCAACCACAAgtgcaacaacaacaacaacaacagcaacaacaacagcagccACAATTGCAGCCACAACAACTTATCGTTACAGCACCTAGGCAGATAGTAGTACAACAAACGATTCAACCAAATAATCAAGTTATTATACCAACCGGTCCAGTGAAAGGAAGACAGGCCCAACCGCAACCGCAAGTTTTATTGCAACAAGGAGCAGGAGGTCAATTACAGTACGTTGTTTCTGGCGGCGTGCCTGGTCAAAATTACGTCCTAGCTCAACCGCAAACGACATTGGTTCAGGGTCAAGCGCAGACTGTGTTAGTAGCTCAGACGACACAGCAGCAAGGAACTGGTGCaaaaacgataattattttgcaatctCAAGCAGCTGCGCAGCCAACCCAACAAAAAATGGTGGCCGTCACACCTCAGGGACAACAGGTTGTTGTTACACAAGTTTCACGTCCTATCTTGCAAAGTCCGGCACTCGGTAATATACCCCCGCCTTTGGTTCCAACGTCAGGCACAATTCCACAAACTTCTATAATAGTGAACAGTTCCGTGGCACAAACAAATCCCAACACAGTGACTGTCACGATTCCTGCAATGGCCCAACAAACACCAGTGTCAACTAGTGTACCATCGAGAGTGGTGACACCAACACCGGCTTCTACTCCACCCCCTACCAGACCTACCACGCCTCATCAAGCAGCTGCAACGCATGGATTGCCGGCGAAACAACCTGCTAAAGTAATGAAGACTGTCAGTTCCTCAACCTCCACAGAACCGGAATCCAAGCCGTCTACGAGCCAGAATCAACCAGAAAAGACCATCACCATCAAAATCGATCCTAATGCTTATTTGTGCGAATGGCGGGGTTGTTTAAGGCAATTTAAAACACCGCACGAAGTTTATCTTCATGTGTGTGAGGCACATTGTCCAACTGGTGGAGAGGAAATATTATGTCTTTGGGCGAGTTGCGATGCCTTAAAAAGACGTAGATTTTCGTTAATGACACATTTATACGATAGGCATTGTAACGCTGAGACAATGTCGATAAGAAGGAAACAGTTGACGGTAACAGGCAAAACCGAAGTTTCCACGTCGACACCGTCAGCTCCTCATCATCCTGGGTATGCACCGAATGCAGCATTCCATGCTATTAAACGGCACGCATTGGAATTTGTAAATCCAAAGGAGTTAATGCAAAGGCCGACCAAGCCCGCTGCAGCCACTTCAAGCTCTTCTTCCCCCAGACCTGGGCAAAATCCTCCACCAGAACAGGATGACAACGAAGGTCCAGTGACCAAAAGTATTCGCTTGACAGCAGCTCTCATTCTTAGAAACCTAGTCATATATTCAACACATGGCAGAAGGCATCTTAGAGCGTACGAACCACATTTGGCAGGTGTCGCATTAAGTAATGTCGAATCATCGAGAACAATCGCACAAGTTTTGTACGATATGAACGATCAAAGCAGCAGTAACCATAGGTGA
Protein Sequence
MAKILNKDPVTYERERDNFLKDLRHFHETRGTPFKKNPKINGKDIDLYLLYVVVTAHGGWIKVNTRNEWASLCEQFHLPNGCVNSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDDDEDSRHRKWSARALHSVPLTYNHHQHNVAESLRDYNGLSSDLYKPSNYDKLALSLLSPLPNEQDFAINVCTLLSNEGKHILRLDKYPRLVNILLAHAGIFDSPGTRQLFIEVYSRVRNYSINSFWSDVLDSQDVIDLTNERTFMKKPTASPQTFSRRKILEREKQNRNAASTENDEASTSMEVDGVIPDCPRLDPTGSHQDEILKDQNQNSIKFEEEDKDLFCVGRTLGTQDPYGQRVLQIASILRNLSFTPENAAVLGRNRCFLRFVLLCVRARWSNLHQLGFDILGNIANEIILKEAGERITDVVLSCVAKGIESQDRFIVISCLEVLNKISQQDSNEEIIRFGLEDNVYELICRFLALNDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVIETVSTVAPPPNAAQNTPVTATAPATTVSSSVPTTPVTVTATPAPVSPAPSRPTTPAATATKSTTHKAVETSNSLQQQHAHQQIIQENEQFALSWLRATFEPALGVRIEQEELYKKYLGCCTKIGRRGVIAPLHFPRCVRSVFGGSVGPNPLKGETSGTQYYEGIRVRATPPQVTYPSQTAVGTNTAPIPAVNTTPVKVLPVQQRTIKSISPAPDSTALDNPASGPPRTPAPASPILKAQLSAPPKPPSSISNTATQSQNPVTKVDSKSQVSVSHPHLSQALLSSGSQTQPQPQVQQVQQQCQTVQVVAKEDNRSGTTSSSIIKSLLATKVTVSSDCMPSTAATCVTTPTACVTNTTASIASSISANQLITSNQVAQRQQQQRLLQQQLTNISQPPTTTTSVTTILPKTPVNSKQKPAITPIPAKKIQRLNGAKFIITNNCDKTEVNDNENVNQIVTSTTSSTVVLNSTENHISSTIKVCRPPTITVTTANKAIQRSTCTSIAEDSDSTNNSLASSSGIGGSRDCSGVGIEEDNSLTSFEGILLNGAPSNMDIDAQEDGSSKDSSSVTSKEKPLQSMMLADLLERKVDKEPILNGVLGKNSINDKGMDLVENHIKKVLKESPTDIKIKSEVEETEVSEDTLIEAPRGIKRSASELDEVDVKKVKYSNGTMSPDLAVDSTTAESTVSSIKSEEQDDDKDNEKVTVSSTAANLYAALAADCIEDETDLDENVNVSVKEEPITIKEPIAIKEEPVNTMKEEPITIKEEPHIFVNQLNQQPPQQQQPSQQQPQQQPQQPPPQSQHPQPQVQQQQQQQQQQQQPQLQPQQLIVTAPRQIVVQQTIQPNNQVIIPTGPVKGRQAQPQPQVLLQQGAGGQLQYVVSGGVPGQNYVLAQPQTTLVQGQAQTVLVAQTTQQQGTGAKTIIILQSQAAAQPTQQKMVAVTPQGQQVVVTQVSRPILQSPALGNIPPPLVPTSGTIPQTSIIVNSSVAQTNPNTVTVTIPAMAQQTPVSTSVPSRVVTPTPASTPPPTRPTTPHQAAATHGLPAKQPAKVMKTVSSSTSTEPESKPSTSQNQPEKTITIKIDPNAYLCEWRGCLRQFKTPHEVYLHVCEAHCPTGGEEILCLWASCDALKRRRFSLMTHLYDRHCNAETMSIRRKQLTVTGKTEVSTSTPSAPHHPGYAPNAAFHAIKRHALEFVNPKELMQRPTKPAAATSSSSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSTHGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSSSNHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01122221;
90% Identity
iTF_00226381;
80% Identity
-