Othy000780.1
Basic Information
- Insect
- Ormyrus thymus
- Gene Symbol
- tfip11_1
- Assembly
- GCA_035582935.1
- Location
- JAWWEM010000001.1:9864546-9867592[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 1.2e+04 -3.5 0.0 58 96 213 251 200 262 0.70 2 3 1.2e-96 1.4e-92 311.1 19.4 2 275 339 605 338 605 0.97 3 3 0.017 2e+02 2.3 0.0 157 203 617 662 609 665 0.64
Sequence Information
- Coding Sequence
- atgTCTGACGAAGAGAtggaaagatttaaaatcacAGATTATGATTTGGATAAtgaattcaatattaatcGTCCTAGACGAAAACTGTCGAAAAAACAGCAAATGCTGGgTATTTGGGCTAGTGATAGCGATGAAGAAGATACAAGGCCATCTTTTAGCAGAGGTCCTAAAAATTACTCTGCACCCGTAAGTTTTGTAGCTGGAGGGATTCAACAAGCAGGACAGcctaaagaaaagaaagatgaGGAAGATGaacaaaaagaagaggaaaatgGTTcaagaagattaaaaaatagttcaagtgaaTCAGAAGATGAATCCAGAGCTACTTCATCAAGATCATTACATTATTCTGTAGGTAATGATATTGCTGGATTAAGAAGGTCAAGGCCTGTAAATccagaaattattaaatcaggTGTTGGTGGTTGGGAAGTTCACACCAAGGGAATTGGAGCAAAATTGCTCCTTCAAATGGGCTTTGAACCAGGTAAAGGATTGGGAAAGTCATTGCAAGGTATAAGTGCTCCAGTAGAAGCTCACTTGAGAAAAGGAAGAGGTGCTATTGGAGCCTATGGCCCAGAAAAAGTTGCAAAACTTGcagaaacaaaattaaaagttgaagacataaatcaaaaaaatcaaaATATTGTTAAATGTAAGGTTACTGATATGACAACACCTGAACAACGAGTATTTAACAGTTATCATGCATTGAATAAAAGGCAGTTGTTACCAGATGAAAATATAAGTCctataaataagaaagaaaaagttaatttttctttaccaGAATTGCAGCATAATTTAGATCTGATTGTGGATATGTGTGAACAGAATATAATACAAAACGACAGAAGAACAAAACATCTTAGCGATAGAGTTGTATCTctggaagaagaaaagaaaaccttGATCAAAATTGTTGATCAACATGCACAGTTGATTGGAACTTTAGAGAATGCTTTAgctatgataaataaattatttgatagaAACAGTGAAATGACTTTGAAAGAGAATGCAGAtgcttttaaagttttgcaAGAAAGGCATTATGAAGAATACAAGGCATATAACTTAGGGGATTTGGCATGtagttttattattccaaaaattaaagaaaacttgtCTACCTGGAATCCTCTCACTCAAGCAAAGTTACCATTAACTTTATTCAAAGAGTGGAaagatattttagaatatgGTAGATTAAATCATCAATCTAGATCAATGAGTCCTTACGATCAGCTTGTTTGGAATGCATGGATGCCAATTATTCGTACTACTATTCAaaattGGGCTTGTAGGCAGCcagataatttaattgatttacttGAACATTGGCTTCCATTATTACCTTCTTGGATAATGgataatttattagatatGATCATTCTTCCAAAGTTAACTTTTGAAGTGGAGGAGTGGAATCCTTTGACTGATACCGTTCCAATTCATACTTGGATACATCCCTGGTTGCCTTTAATGaGGAATCGTATGGATACACAAATATATCCAAtaattagaagaaaactagGGTCGGCTCTAGGTGCTTGGCACCCATCTGATCGATCAGCTAGATTGATGCTCCAACCGTGGTCGCAAGTCTTTACAAAAGGCGATATGGATGCTTtcttagtaaaaaatattttgccaaAATTGCAAATTGCGCTATCCGAGTTGATAATCAATCCTCATCAGCAGCATTTAGATCAATGGAATTGGGTTTATGATTGGAGGGATTTAATTCCCGTTCATACAATGGCTGCGTTGTTagataaattctttttcccaAAATGGTTACAAGTTTTGGGACTCTGGTTGAATCACTCACCGAATTATGAGCAAGTAACCAATTGGTATACAGGTTGGAAGGGAATGCTTAACGATAAACTTATTGCAGAACCAATCATcaaagAGCATTTTCGAAAAGCATTAGAAATGATGAACAGAGCAGTTTCCGTTCCACAAGGTCTTCAACCAGGTTCCGTCGAACAAGTCTCATACTTGACAAGCTTAGAACGTAGTCAACCACAGATACCTCAAATTTCTCAGCCAAGGATGGAAAGACTAGCAGAGGCCGTAAGAACAGTGTCGCAAATTCCGCAAGGTTTCAAAGACTTGGTGCAAAAGAAATGCGAAGAAAGAGGTATTTTATTCATGCCCTTACCAAATAGGTATCGGGAAGGAAagcaaatttacaaaattggtAACGTACAAGCCTACATCGACAGCGACGTATTATTTGTTTGCCATAATGGTCTGACGTGGCTACCAACAAACTTAAATACATTGTTGGACACAgctgaaatgaaataa
- Protein Sequence
- MSDEEMERFKITDYDLDNEFNINRPRRKLSKKQQMLGIWASDSDEEDTRPSFSRGPKNYSAPVSFVAGGIQQAGQPKEKKDEEDEQKEEENGSRRLKNSSSESEDESRATSSRSLHYSVGNDIAGLRRSRPVNPEIIKSGVGGWEVHTKGIGAKLLLQMGFEPGKGLGKSLQGISAPVEAHLRKGRGAIGAYGPEKVAKLAETKLKVEDINQKNQNIVKCKVTDMTTPEQRVFNSYHALNKRQLLPDENISPINKKEKVNFSLPELQHNLDLIVDMCEQNIIQNDRRTKHLSDRVVSLEEEKKTLIKIVDQHAQLIGTLENALAMINKLFDRNSEMTLKENADAFKVLQERHYEEYKAYNLGDLACSFIIPKIKENLSTWNPLTQAKLPLTLFKEWKDILEYGRLNHQSRSMSPYDQLVWNAWMPIIRTTIQNWACRQPDNLIDLLEHWLPLLPSWIMDNLLDMIILPKLTFEVEEWNPLTDTVPIHTWIHPWLPLMRNRMDTQIYPIIRRKLGSALGAWHPSDRSARLMLQPWSQVFTKGDMDAFLVKNILPKLQIALSELIINPHQQHLDQWNWVYDWRDLIPVHTMAALLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLNDKLIAEPIIKEHFRKALEMMNRAVSVPQGLQPGSVEQVSYLTSLERSQPQIPQISQPRMERLAEAVRTVSQIPQGFKDLVQKKCEERGILFMPLPNRYREGKQIYKIGNVQAYIDSDVLFVCHNGLTWLPTNLNTLLDTAEMK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01110114; iTF_01110953; iTF_01112591; iTF_01111763;
- 90% Identity
- iTF_01110114; iTF_01110953; iTF_01112591; iTF_01111763;
- 80% Identity
- -