Opom011837.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ormyrus pomaceus
Gene Symbol
TFIP11
Assembly
GCA_900474385.1
Location
UCOM01000004.1:181922-184974[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-96 9.6e-93 311.1 19.1 1 275 385 652 385 652 0.98
2 2 0.014 1e+02 2.6 0.0 156 203 663 709 656 712 0.70

Sequence Information

Coding Sequence
atgtctGACGAAGAGAtggaaagatttaaaatcacAGATTATGATTTGGAAAATGAATTCAATATTAACCGTCCTAGAcgaaaaatgtcgaaaaaacaacaaatgctgggTGTTTGGGCTAGCGATAGCGATGAAGAAGATGCAAGGCCATCTTTTAGCAGAGCTCCTAAAAATTACTCTGCACCCGTAAGTTTTGTAGCTGGAGGGATTCAACAAGCAGGACAGcctaaagaaaagaaagatgaggaagatgaagaagaagaagaggaaaatgattcaagaagaataaaaaatagttcgagtgaatCGGAAGAGGAATCCAGAGCTACTTCATCAAgatcatttaattattctgtAGGTAATGATATTGCTGGATTAAGAAAGTCAAGGCCTCCTGTAAATCCAGAACTTATGAAATCAGGTGTTGGTGGTTGGGAAGTTCACACCAAGGGAATTGGAGCAAAATTGCTTCTTCAAATGGGTTTTGAACCAGGTAAAGGATTGGGAAAGTCATTGCAAGGTATAAGTGCTCCAGTAGAAGCTCATTTGAGAAAAGGAAGAGGTGCTATTGGAGCCTATGGCCCAGAAAAAGTTGCAAAACTTGCAGAAACGAAACTAAAAGTTGAAgacataaatcaaaaaaatcaaagtaaaaataaagtttcacaATGgaagaaaactgaaaaaagtgacaagaaaaaatcaaattattcttATCGAAGCGTTGATGACGTATTAAAAGATGGAAGATCAAagcaaaatagaaaaatgccAATTATAAATACAGAGATTGTTAAATGTAAGGTTACTGATATGACAACGCCTGAACAACGAGTATTTAATAGTTATCATGCATTGGGTAAAAGGCAGTTGTTACCAGATGAAAATATAAGCCctataaataagaaagaaaaagttaatttttctttaccaGAATTGCAGCATAATTTAGATCTGATTGTGGATATGTGTGAACAGAATATAATACAAAACGATAGAAGAACAAAAAATCTTAGCGATAGAGTTGTATCTctggaagaagaaaagaaaactttgataaaaattgttgatcaCCATGCACAGTTGATTGGAACTTTAGAAAATGCTTTAGctatgataaataaattatttgatagaAACAGTGAAATGACTTTGAAAGAGACTGCAGATGCTTTTAAAGTGTTGCAAGAAAGACATTATGAAGAATACAAGGCATATAACTTAGGAGACTTGGCATGCAGTTTtattattccaaaaattacagaaaactTGTCTACGTGGAATCCTCTCACTCAAGCAAAGTTACCATTAACTTTATTCAAAGAGTGGAaagatattttagaatatGGTAGATTAAATCATCAATCTAGATCAATGAGTCCTTATGATCAACTTGTTTGGAATGCATGGATGCCAATTATTCGTTCTACTATTCAaaattgGGCATGTAGGCAGccagataatttaattgatttacttGAACATTGGCTTCCATTATTACCTTCTTGGATAATGGATAATTTATTGGATATGATTATTCTTCCAAAGTTGACTTTTGAAGTGGAGGAGTGGAATCCTTTGACTGATACTGTTCCAATTCATACTTGGATACATCCCTGGTTGCCTTTAATGAGAAATCGGATGGATACACAAATATATCCAATAATCAGAAGGAAACTAGGTTCTGCTCTAGGTGCTTGGCACCCATCTGATCGATCAGCTAGACTGATGCTCCAACCGTGGTCGCAAGTCTTTACAAAAGGCGATATGGATGCTTtcttagtaaaaaatattttgccaaAACTGCAAATTTCGCTATCTGAGTTGATAATCAATCCTCATCAGCAGCATTTAGATCAATGGAATTGGGTTTATGATTGGAGGGATTTAATTCCCGTTCATACAATGGCTGCCTTATTagataaattctttttcccaAAATGGTTACAAGTTTTGGGACTCTGGTTGAATCACTCACCAAATTATGAGCAAGTAACCAATTGGTATACAGGTTGGAAGGGAATGCTTAGCGAGAAACTTATTGCAGAACCAATCAtcaaagagcATTTTCGAAAAGCATTAGAAATGATGAACAGAGCAGTTTCCGTTCCACAAGGTCTTCAACCAGGTTCAGTCGAACAAGTCTCATACTTGACAAGTTTAGAACGTAGTCAACCACAGATACCTCAAATTTCTCAGCCAAGGATGGAAAGACTAGCAGAGGCCGTAAGAACAGTATCGCAAATACCGCAAGGTTTCAAAGACTTGGTGCAAAAGAAATGCGAAGAAAGAGGTATTTTATTCATGCCCTTACCAAACAGATATCGAGAAGGAAagcaaatttataaagttgGTAACGTACAAGCCTACATCGACAGCGACGTATTATTTGTTTGCCATAATGGTCTGACGTGGCTACCAACAAACTTAAATACATTGTTGGACACAgctgaaatgaaataa
Protein Sequence
MSDEEMERFKITDYDLENEFNINRPRRKMSKKQQMLGVWASDSDEEDARPSFSRAPKNYSAPVSFVAGGIQQAGQPKEKKDEEDEEEEEENDSRRIKNSSSESEEESRATSSRSFNYSVGNDIAGLRKSRPPVNPELMKSGVGGWEVHTKGIGAKLLLQMGFEPGKGLGKSLQGISAPVEAHLRKGRGAIGAYGPEKVAKLAETKLKVEDINQKNQSKNKVSQWKKTEKSDKKKSNYSYRSVDDVLKDGRSKQNRKMPIINTEIVKCKVTDMTTPEQRVFNSYHALGKRQLLPDENISPINKKEKVNFSLPELQHNLDLIVDMCEQNIIQNDRRTKNLSDRVVSLEEEKKTLIKIVDHHAQLIGTLENALAMINKLFDRNSEMTLKETADAFKVLQERHYEEYKAYNLGDLACSFIIPKITENLSTWNPLTQAKLPLTLFKEWKDILEYGRLNHQSRSMSPYDQLVWNAWMPIIRSTIQNWACRQPDNLIDLLEHWLPLLPSWIMDNLLDMIILPKLTFEVEEWNPLTDTVPIHTWIHPWLPLMRNRMDTQIYPIIRRKLGSALGAWHPSDRSARLMLQPWSQVFTKGDMDAFLVKNILPKLQISLSELIINPHQQHLDQWNWVYDWRDLIPVHTMAALLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLSEKLIAEPIIKEHFRKALEMMNRAVSVPQGLQPGSVEQVSYLTSLERSQPQIPQISQPRMERLAEAVRTVSQIPQGFKDLVQKKCEERGILFMPLPNRYREGKQIYKVGNVQAYIDSDVLFVCHNGLTWLPTNLNTLLDTAEMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01113421;
90% Identity
iTF_01113421;
80% Identity
-