Olab000827.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ormyrus labotus
Gene Symbol
tfip11
Assembly
GCA_035582975.1
Location
JAWWEO010000001.1:9970726-9973784[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4 1.3e+04 -3.9 0.1 231 252 205 226 197 231 0.71
2 3 2.5e-96 2.4e-92 310.1 18.5 1 275 385 652 385 652 0.98
3 3 0.017 1.7e+02 2.3 0.0 157 202 664 708 657 711 0.58

Sequence Information

Coding Sequence
atgtctGACGAAGAAAtggaaagatttaaaatcacAGATTATGATTTGGACAATGAATTCAATATTAACCGCCCTAGACgaaaaatgtcgaaaaaacaacaaatgctgggTGTTTGGGCTAGTGATAGTGATGAAGAAGATGCAAGGCCATCTTTTAGCAGAGGTCCTAAAAATTACTCTGCACCCGTAAGTTTTGTAGCTGGAGGGATTCAACAAGCAGGACAGcctaaagaaaagaaagatgaggaagatgaagaagaagaagaggaaaatgattcaagaagaataaaaaatagttcaagtgaaTCGGAAGAGGAATCCAGAGCTACTTCATCAAGATCATTTCCTTATTCTGTAGGTAATGATATTGCTGGATTAAGAAAGTCAAGGCCTCCTGTAAATCCAGAACTTATGAAATCAGGTGTTGGTGGTTGGGAAGTTCACACCAAGGGAATTGGAGCAAAATTGCTCCTTCAAATGGGTTTCGAACCAGGCAAAGGATTGGGAAAGTCATTGCAAGGTATAAGTGCTCCAGTAGAAGCTCATTTGAGAAAAGGAAGAGGTGCTATTGGAGCCTATGGCCCAGAAAAAGTTGCAAAACTTGCagaaacaaaactaaaaattgaagacataaaccaaaaaaatcaaagtaaaaataaagtttcacaatggaagaaaactgaaaaaagtgacaagaaaaaatcaaattattcttATCGAAGTGTTGATGAGGTATTAAAAGATGGAAGATCAAagcaaaatagaaaaatgccAATTATAAATACAGATATTGTTAAATGTAAGGTTACTGATATGACAACGCCTGAACAACGAGTATTTAACAGTTATCATGCATTGGGTAAAAGGCAGTTGTTACCAGATGAAAATATAAGTCctataaataagaaagaaaaagttaatttttctttaccaGAATTGCAGCATAATTTAGATCTCATTGTAGATATGTGTGAACAGAATATAATACAAAACGATAGAAGAACAAAAAGTCTTAGCGATAGAGTTGTAGCTctggaagaagaaaagaaaactttgataaaaattgttgatcAACATGCACAGTTGATTGGAACTTTAGAAAATGCTTTAGctatgataaataaattatttgatagaAACAGTGAAATGACTTTGAAAGAGACTGCAGatgcttttaaagttttgcaaGAAAGACATTATGAAGAATACAAGGCATATAACTTAGGAGATTTGGCATGCAGTTTtattattccaaaaattacagaaaactTGTCTACCTGGAATCCGCTCACTCAAGCAAAGTTACCATTAACTTTATTCAAAGAGTGGAaagatattttagaatatGGTAGATTAAATCATCAATCTAGATCAATGAGTCCTTACGATCAACTTGTTTGGAATGCATGGATGCCAATTATTCGTACTACTATTCAaaattgGGCTTGTAGGCAGccagataatttaattgatttactaGAACATTGGCTACCATTATTACCTTGTTGGATAATGGATAATTTATTGGATATGATTATTCTTCCAAAATTGACTTTTGAAGTGGAGGAGTGGAACCCTTTGACTGATACTGTTCCAATTCATACTTGGATACATCCCTGGTTGCCTTTAATGAGAAATCGGATGGATACACAAATATATCCAATAATCAGAAGGAAACTAGGTTCTGCTCTAGGCGCTTGGCACCCATCTGATCGGTCAGCTAGATTGATGCTCCAACCGTGGTCGCAAGTCTTTACAAAAGGCGATATGGATGCTTtcttagtaaaaaatattttgccaaAACTGCAAATTGCGCTATCTGAGTTGATAATCAATCCTCATCAGCAGCATTTAGATCAATGGAATTGGGTTTATGATTGGAGGGATTTAATTCCCATTCATACAATGGCTGCCTTGTtagataaattctttttcccaAAATGGTTACAAGTTTTGGGACTCTGGTTGAATCACTCACCGAATTATGAGCAAGTAACCAATTGGTATACAGGTTGGAAGGGAATGCTCAGTGATAAACTTATTGCAGAACCAATCATcaaagagcaTTTTCGTAAAGCATTAGAAATGATGAACAGAGCAGTTTCCGTTCCACAAGGTCTTCAACCAGGTTCCGTCGAACAAGTCTCATACTTGACAAGCTTAGAACGCAGTCAACCACAGATACCTCAAATTTCTCAGCCAAGGATGGAAAGACTAGCAGAGGCCGTAAGAACAGTATCGCAAATTCCGCAAGGTTTCAAAGACTTGGTGCAAAAGAAATGCGAAGAAAGAGGTATTTTATTCATGCCCTTACCAAACAGATATCGGGAAGGAaagcaaatttataaaattggcAACGTACAAGCTTACATCGACAGCGACGTATTATTTGTTTGCCATAATGGTCTGACGTGGCTACCAACAAACTTAAATACGTTGTTGGACACAgctgaaatgaaataa
Protein Sequence
MSDEEMERFKITDYDLDNEFNINRPRRKMSKKQQMLGVWASDSDEEDARPSFSRGPKNYSAPVSFVAGGIQQAGQPKEKKDEEDEEEEEENDSRRIKNSSSESEEESRATSSRSFPYSVGNDIAGLRKSRPPVNPELMKSGVGGWEVHTKGIGAKLLLQMGFEPGKGLGKSLQGISAPVEAHLRKGRGAIGAYGPEKVAKLAETKLKIEDINQKNQSKNKVSQWKKTEKSDKKKSNYSYRSVDEVLKDGRSKQNRKMPIINTDIVKCKVTDMTTPEQRVFNSYHALGKRQLLPDENISPINKKEKVNFSLPELQHNLDLIVDMCEQNIIQNDRRTKSLSDRVVALEEEKKTLIKIVDQHAQLIGTLENALAMINKLFDRNSEMTLKETADAFKVLQERHYEEYKAYNLGDLACSFIIPKITENLSTWNPLTQAKLPLTLFKEWKDILEYGRLNHQSRSMSPYDQLVWNAWMPIIRTTIQNWACRQPDNLIDLLEHWLPLLPCWIMDNLLDMIILPKLTFEVEEWNPLTDTVPIHTWIHPWLPLMRNRMDTQIYPIIRRKLGSALGAWHPSDRSARLMLQPWSQVFTKGDMDAFLVKNILPKLQIALSELIINPHQQHLDQWNWVYDWRDLIPIHTMAALLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLSDKLIAEPIIKEHFRKALEMMNRAVSVPQGLQPGSVEQVSYLTSLERSQPQIPQISQPRMERLAEAVRTVSQIPQGFKDLVQKKCEERGILFMPLPNRYREGKQIYKIGNVQAYIDSDVLFVCHNGLTWLPTNLNTLLDTAEMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01113421;
90% Identity
iTF_01113421;
80% Identity
iTF_01112591;