Basic Information

Insect: Ormyrus rosae
Gene Symbol: -
Assembly: GCA_035047165.1
Location: JAWWML010000032.1:9500584-9504087[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0064 0.75 11.2 0.3 1 20 106 125 106 126 0.96

2 13 0.012 1.5 10.3 4.6 2 23 248 270 248 270 0.91

3 13 2e-05 0.0024 19.1 1.4 2 23 325 347 324 347 0.95

4 13 8.7 1e+03 1.3 7.4 3 23 431 452 430 452 0.86

5 13 0.02 2.4 9.6 1.5 1 23 501 524 501 524 0.95

6 13 0.00023 0.027 15.8 0.0 3 23 573 594 572 594 0.96

7 13 0.0036 0.43 12.0 0.1 3 23 632 653 631 653 0.94

8 13 0.01 1.2 10.6 3.7 2 23 697 719 696 719 0.96

9 13 0.034 4 8.9 2.7 3 23 734 755 732 755 0.94

10 13 7.6e-06 0.0009 20.4 0.2 2 23 800 822 800 822 0.96

11 13 4.5 5.3e+02 2.2 2.3 1 23 911 935 911 935 0.97

12 13 5.3e-05 0.0062 17.8 0.1 2 23 952 974 951 974 0.96

13 13 0.0058 0.68 11.3 0.8 1 23 1057 1080 1057 1080 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0064	0.75	11.2	0.3	1	20	106	125	106	126	0.96
2	13	0.012	1.5	10.3	4.6	2	23	248	270	248	270	0.91
3	13	2e-05	0.0024	19.1	1.4	2	23	325	347	324	347	0.95
4	13	8.7	1e+03	1.3	7.4	3	23	431	452	430	452	0.86
5	13	0.02	2.4	9.6	1.5	1	23	501	524	501	524	0.95
6	13	0.00023	0.027	15.8	0.0	3	23	573	594	572	594	0.96
7	13	0.0036	0.43	12.0	0.1	3	23	632	653	631	653	0.94
8	13	0.01	1.2	10.6	3.7	2	23	697	719	696	719	0.96
9	13	0.034	4	8.9	2.7	3	23	734	755	732	755	0.94
10	13	7.6e-06	0.0009	20.4	0.2	2	23	800	822	800	822	0.96
11	13	4.5	5.3e+02	2.2	2.3	1	23	911	935	911	935	0.97
12	13	5.3e-05	0.0062	17.8	0.1	2	23	952	974	951	974	0.96
13	13	0.0058	0.68	11.3	0.8	1	23	1057	1080	1057	1080	0.98

Sequence Information

Coding Sequence: ATGTCCTCGAGCCAGGAGACATGCCTACCAGAGTCGACGGAGATCGATAGCGAGGGTTCGAGCTGCGAGGAGCGAGAGTCCCGCAGGCGGCTCCTCGGCGATCCCGAAGGCCTGCCCAAGAAGCGGCGGAAGCAGTCGACGCCCGTCAAGTTCTCGACCTCGCTCACCGTCGGCGAGTACGACGAGTCCGaagaggagcagcagcagcagcagcaacaagcGAGGAAGAACGGCGAGCTGGAAGGTAAGCCGACGAGCGCGCCGCACCTCAAGTCCATCCAGAGCCATCCGAAAGACGAGAATCTGAACAATGAATTTCGCTGCCAGTATTGTAGTCAATTTTTCGATAACCGCGTCGCGCTCGAGCTGCACCTCGAGTGCGAGCACAACGCCTCGGGCAGCGGACAGCAGCAGGGCTGCCCCTCGAGCAACGACAGCTCGCCGCAGGTGCAGCCCTGCCTCAGCCCGGACGCGAGCGCGGCCCTGCCGCTCCTGCACTCCGAGCAGTCCGTCAGTCCCATCAACCTCTCGGGCATCAGCATCAGAAACTTCGCGGCCACCACGTCCTGGCTGACGGGCCAGAGCGCGGCCGGCAGGAGCGGCAACCACTTTCAGCCGACGGCGGCCTTCCCCGCTCCCCTGGCCCAGTTCCTGCCGATGCCCGGCTTCCCCATGCCGGACTCCACGCAAATCCAGCGGGCGGCCATGGCCCAGTTCCCAAAGATATTCAATCCCGACGCGTACTGTGATCTCTGTAATAAGGAATTTTGCAACAAGTACTTTCTTAAGACGCACAAGGCCAACAAGCACGGAATCTACGTCGATCCGCCGATCAATCCATCCCAAGCCAACGACGCCAACGCGGCCTCGAGCTCCTTCGTCACCAGCAATTCGCCCATCAAGCTGCCCGAGCAGCCGCCGAGGCTACTCGAGAACAACggcctgcagcagcagcagcaggcgccGACTCTACCCTGTGATATGTGCACCAAGCGCTTCAAGAACGAGGACTCGCTGAGAAAGCACAGGCAGAAGATTCACCTGAATCCCAGTAACGAAATCATCGATTCCACGCAAATGCAAATGAGTctgccggccgccgccgccggcgacgAGGAACGACAGAGCCCCGGCGGCATGGAAACCCTCTTCAAACAAGAGTACAACATCGATCAAGACGAGTCGCCCTACGACGCGTCGACCCCGAGGCCTCTGGACATGTCGCCTCCCTTGTCCCAAGCCAACGGAGATCGGTTGAGACGCCTGGGCGTCATGAATCCGGAGGCCTTCTGCGAAATCTGCTGCAAAGAGTACTGCAACAAGTACTTCCTTCGCACCCACAAGCTCAAGAGGCACTCCATCCTCGTTCCCGACAACGATAAATCGCCGAGTGCTCCCGTCTCCGGAGCCAGCTGGCATCAAGTGCAAACGAGTCCTCTGAACCTCATCATGGGCGACGGCCTGGGAAACGGATCCGAGTCCGGTGACCGTACCGAGGAATACGCCTGCCGATCCTGCGGCATCCGCTTCCAGACTCAGAGCCTCTATCATCTGCATCTCGAAAAGATTCACGAGAGCGGCGAACAGCTGTCGCCGAGGCCGGAGCCGGAAATCGATCCGATGGACCAGAGAACCGACTCCATCTCCGAGGATCTTCAGAAGCTGCAGACCATGATTCTGCAGCTGAACGGCCTCGAATCGAACAAGGCAGCTTCCTGCGCACTTTGCGGCAAAGACTACGACACCCCCGGTGCACTCAGGAGTCACATGATCACTGAACACGGCGTAGAGTCGGACAATTTGTTACcaacgcagcagcagcaacagcagcaacagcagcagcagcagctagTCCAAGAGAAGCCAGCTCCCGCCGTCGTCGCGCAAACGCTCTGCACCCTCTGCGAGAGGGAGTACCCCAACCAAGAAGCCTTGAGAAAACATATCGCGGAAGACCATCAGCCGTCAACGCCCACGAGCTCGACGACGCCTCAGCTCCCGTCGTCCTCGGTGCCCACGACTCCGAAATCCAACCCCGCCCAGTCGGCGGAGAGAAAGGCCACCGCTTCCATCACTCCCACCTCGAGCTACTGCGAGATCTGCAACAAGGAGCTCTGCAACAAATACTTCATGAAGACGCACATGCAGAAGATGCACGGAATCGAGATAGAGAACGGGGCGCAGATCGGCGGTGTCATCTGCAACATCTGCAAGAAGGAGCTCTGCAGCAAGTACTTTCTGCGCGTTCACAAGCAAAACACCCACGGCATCGTCGAGGAGGGCGCGTCTGCCGGCAAGCAGGAGAGCTTCGAGCCGCCGGCCAACTCGGACGATCTGGCTCTGAAGCCGGAGCAGCTTGGCGACCTCAACCTTCGATACATCACCCACTTTACGGAGGTCTGCCCGATCTGCAATCGCCGATTCCGCAGTCCCAAGTGGCTAAAGGTGCATTTGCAAAGCGAACACGGAAAGGCAGGGATAGACAAGTGGCGCGAGATCGAGCAATACCATCAATCGACGATAAAGAGCCCCGTCCGAGTTGCCAACGTACCGAAAAGctctcagcagcagcagcagcagcaactgCAGCAGTCGCACAGCAACGCCAGTCTCAGGATACCCAACGGTTTCGAGCCGAATCAGCAAATAAGAGCAGACCTAGCCGCTCTGGGGAATCAAGTCCTCTCGAACTTCTTCGGCAGCTCGAACGAAGACCAGCCGACACAGACTTACCGCTGCTCCCAGCTTCACTGCAACTTCTCGACGTCGATCCTGCCGCTGTTCTTCCTCCACGAGAGATCCCACAGCCAGCAAGAGAACGCAGCAGCCGCCCAGGAGAGCGAGCGGCTCACTCAATGTCCGATCTGCGCTCAGAGCTTCGCCCAGCCGGAACTGCTGCGCCAGCACATCGCCACCCGGCACATGCTCAATCACGGCAGCCCGGGCCCCTTCCCGGGCCTGCTCTCCCAGTTCCCCATGCCTCTCCTCGGCGAATTCGCCCTGGGCAAcgagcaacagcagcaacccCAACACCAAGAGCGCGAGTTCGCCGAGGCGAAGGAGGAGTTCCGCCAGGCGAGTCCCCAGATAATGAACGAAATCGACACGAACAAGATGAAGAAGGCCGAGGAGAAGATGCACGCGGTCCAGGTGATGCCCCAGGGCGCCTACAAGTGCTCCCAGTGCGGCTTCGCCACCGCTAATCTCAACCGCATCAAGAAGCACATCCGCAAGGATCACAAGAGCCTCGGCGACCCGGCCGAGACCGCCCTCACCGAGCTCGTCAAGACCCTCAAGGACGTGGCGAACAAGCACAAGGTGCCGGCCAGCTACGCCATGCCCCAGGACGACAAGCACTGCCCCCTCATGCAGCCCTTCATAATCGAGGAGCTCGACGgcgaggagcagcagcagcggagaTTCGCGCCCGCCCTGGTTTTCCTGCCCGTCAACGCCAGGGTGAACGGCGCCCTCACCCTCTCCTTCACGCTGAACCCCGCCTGA
Protein Sequence: MSSSQETCLPESTEIDSEGSSCEERESRRRLLGDPEGLPKKRRKQSTPVKFSTSLTVGEYDESEEEQQQQQQQARKNGELEGKPTSAPHLKSIQSHPKDENLNNEFRCQYCSQFFDNRVALELHLECEHNASGSGQQQGCPSSNDSSPQVQPCLSPDASAALPLLHSEQSVSPINLSGISIRNFAATTSWLTGQSAAGRSGNHFQPTAAFPAPLAQFLPMPGFPMPDSTQIQRAAMAQFPKIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDPPINPSQANDANAASSSFVTSNSPIKLPEQPPRLLENNGLQQQQQAPTLPCDMCTKRFKNEDSLRKHRQKIHLNPSNEIIDSTQMQMSLPAAAAGDEERQSPGGMETLFKQEYNIDQDESPYDASTPRPLDMSPPLSQANGDRLRRLGVMNPEAFCEICCKEYCNKYFLRTHKLKRHSILVPDNDKSPSAPVSGASWHQVQTSPLNLIMGDGLGNGSESGDRTEEYACRSCGIRFQTQSLYHLHLEKIHESGEQLSPRPEPEIDPMDQRTDSISEDLQKLQTMILQLNGLESNKAASCALCGKDYDTPGALRSHMITEHGVESDNLLPTQQQQQQQQQQQQLVQEKPAPAVVAQTLCTLCEREYPNQEALRKHIAEDHQPSTPTSSTTPQLPSSSVPTTPKSNPAQSAERKATASITPTSSYCEICNKELCNKYFMKTHMQKMHGIEIENGAQIGGVICNICKKELCSKYFLRVHKQNTHGIVEEGASAGKQESFEPPANSDDLALKPEQLGDLNLRYITHFTEVCPICNRRFRSPKWLKVHLQSEHGKAGIDKWREIEQYHQSTIKSPVRVANVPKSSQQQQQQQLQQSHSNASLRIPNGFEPNQQIRADLAALGNQVLSNFFGSSNEDQPTQTYRCSQLHCNFSTSILPLFFLHERSHSQQENAAAAQESERLTQCPICAQSFAQPELLRQHIATRHMLNHGSPGPFPGLLSQFPMPLLGEFALGNEQQQQPQHQEREFAEAKEEFRQASPQIMNEIDTNKMKKAEEKMHAVQVMPQGAYKCSQCGFATANLNRIKKHIRKDHKSLGDPAETALTELVKTLKDVANKHKVPASYAMPQDDKHCPLMQPFIIEELDGEEQQQRRFAPALVFLPVNARVNGALTLSFTLNPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01112085;
90% Identity: iTF_01110410; iTF_01111243; iTF_01112085; iTF_01113690;
80% Identity: -