Basic Information

Insect: Ormyrus labotus
Gene Symbol: -
Assembly: GCA_035582975.1
Location: JAWWEO010000021.1:22572379-22575894[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0064 0.67 11.2 0.3 1 20 105 124 105 125 0.96

2 13 0.012 1.3 10.3 4.6 2 23 253 275 253 275 0.91

3 13 2.1e-05 0.0022 19.0 1.4 2 23 329 351 328 351 0.95

4 13 8.7 9.2e+02 1.3 7.4 3 23 434 455 433 455 0.86

5 13 0.02 2.1 9.6 1.5 1 23 504 527 504 527 0.95

6 13 0.00023 0.024 15.8 0.0 3 23 576 597 575 597 0.96

7 13 0.0036 0.38 12.0 0.1 3 23 635 656 634 656 0.94

8 13 0.01 1 10.6 3.7 2 23 700 722 699 722 0.96

9 13 0.035 3.6 8.9 2.7 3 23 737 758 735 758 0.94

10 13 7.7e-06 0.0008 20.4 0.2 2 23 803 825 803 825 0.96

11 13 4.5 4.7e+02 2.2 2.3 1 23 914 938 914 938 0.97

12 13 5.3e-05 0.0056 17.7 0.1 2 23 955 977 954 977 0.96

13 13 0.0058 0.61 11.3 0.8 1 23 1061 1084 1061 1084 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0064	0.67	11.2	0.3	1	20	105	124	105	125	0.96
2	13	0.012	1.3	10.3	4.6	2	23	253	275	253	275	0.91
3	13	2.1e-05	0.0022	19.0	1.4	2	23	329	351	328	351	0.95
4	13	8.7	9.2e+02	1.3	7.4	3	23	434	455	433	455	0.86
5	13	0.02	2.1	9.6	1.5	1	23	504	527	504	527	0.95
6	13	0.00023	0.024	15.8	0.0	3	23	576	597	575	597	0.96
7	13	0.0036	0.38	12.0	0.1	3	23	635	656	634	656	0.94
8	13	0.01	1	10.6	3.7	2	23	700	722	699	722	0.96
9	13	0.035	3.6	8.9	2.7	3	23	737	758	735	758	0.94
10	13	7.7e-06	0.0008	20.4	0.2	2	23	803	825	803	825	0.96
11	13	4.5	4.7e+02	2.2	2.3	1	23	914	938	914	938	0.97
12	13	5.3e-05	0.0056	17.7	0.1	2	23	955	977	954	977	0.96
13	13	0.0058	0.61	11.3	0.8	1	23	1061	1084	1061	1084	0.98

Sequence Information

Coding Sequence: ATGTCCTCGAGCCAGGAGACATGCCTACCAGAGTCGACGGAGATCGATAGCGAGGGTTCGAGCTGCGAGGAGCGAGAGTCCCGCAGGCGGCTCCTCGGCGATCCCGAAGGCCTGCCCAAGAAGCGGCGGAAGCAGTCGACGCCCGTCAAGTTCTCGACCTCGCTCACCGTCGGCGAGTACGACGAGTCCGaagaggagcagcagcagcagcaacaagcTAGGAAGAACGGCGAGCTGGAAGGTAAGCCGACGAGCGCGCCGCACCTCAAGTCCATCCAGAGCCATCCGAAAGACGAGAATCTGAACAATGAATTTCGCTGCCAGTATTGTAGTCAATTTTTCGATAACCGCGTCGCGCTCGAGCTGCACCTCGAGTGCGAGCACAACGCCTCGGGCAGCGGAGGCGCCGCGCtgccgccgcagcagcaggGCTGCCCCTCGAGCAACGACAGCTCGCCGCAGGTGCAGCCCTGCCTCAGCCCGGACGCGAGCGCGGCCCTGCCGCTCCTGCACTCCGAGCAGTCCGTCAGTCCCATCAACCTCTCGGGCATCAGCATCAGAAACTTCGCGGCCACCACGTCCTGGCTGACGGGCCAGAGCGCGGCCGGCAGGAGCGGCAACCACTTTCAGCCGACGGCGGCCTTCCCCGCTCCCCTGGCCCAGTTCCTGCCGATGCCCGGCTTCCCCATGCCGGACTCCACGCAAATCCAGCGGGCGGCCATGGCCCAGTTCCCAAAGATATTCAATCCCGACGCGTACTGTGATCTCTGTAATAAGGAATTTTGCAACAAGTACTTTCTTAAGACGCACAAGGCCAACAAGCACGGAATCTACGTCGATCCGCCGATCAATCCATCCCAAGCCAACGACGCCAACGCGGCCTCGAGCTCCTTCGTCACCAGCAATTCGCCCATCAAGCTGCCCGAGCAGCCGCCGAGGCTACTCGAGAACAACggcctgcagcagcagcaggcgccGACTCTACCCTGTGATATGTGCACCAAGCGCTTCAAGAACGAGGACTCGCTGAGAAAGCACAGGCAGAAGATTCACCTGAATCCCAGTAACGAAATCATCGATGCCACGCAAATGCAAATGAGTctgccggccgccgccggcgaCGAGGAACGACAGAGCCCCGGCGGCATGGAAACGCTCTTCAAACAAGAGTACAACATCGATCAAGACGAGTCGCCCTACGACGCGTCGACCCCGAGGCCTCTGGACATGTCGCCTCCTTTGTCCCAAGCCAACGGAGATCGGTTAAGACGCCTGGGCGTCATGAATCCCGAGGCCTTCTGCGAAATCTGCTGCAAAGAGTACTGCAACAAGTACTTCCTTCGCACCCACAAGCTCAAGAGGCACTCCATCCTCGTTCCCGACAACGATAAATCGCCGAATGCTCCCGTCTCCGGAGCCAGCTGGCATCAAGTGCAAACGAGTCCTCTGAACCTCATCATGGGCGACAGCCTGGGAAACGGATCCGAGTCCGGTGACCGCACCGAGGAATACGCCTGCCGATCCTGCGGCATCCGTTTCCAGACTCAGAGCCTCTATCACCTGCATCTCGAAAAGATTCACGAAAGCGGCGAACAGCTGTCGCCGAGGCCCGAGCCGGAAATCGATCCGATGGACCAGAGAACCGACTCCATCTCCGAGGATCTTCAGAAGCTGCAGACCATGATTCTGCAGCTGAACGGCCTCGAATCGAACAAGGCAGCTTCCTGCGCACTTTGCGGCAAAGACTACGACACCCCCGGTGCACTCAGAAGTCACATGATCACCGAACACGGCGTAGAGTCGGACAATTTGTTACcaacgcagcagcagcaacagcagcaacagcagcagcagcagctagTCCAAGAGAAGCCAACTCCCGCCGTCGTCGCGCAAACGCTCTGCACCCTCTGCGAGAGGGAGTACCCCAACCAAGAAGCCTTGAGAAAACATATCGCGGAAGACCATCAGCCGTCAACGCCCACGAGCTCGACGACGCCTCAGCTCCCGTCGTCCTCGGTGCCCACGACTCCGAAATCCAACCCCGCCCAGTCGGTGGAGAGAAAGGCCACCGCTTCCATCACTCCCACCTCGAGCTACTGCGAGATCTGCAACAAGGAGCTCTGCAACAAATACTTCATGAAGACGCACATGCAGAAGATGCACGGAATCGAGATAGAGAACGGGGCGCAGATCGGCGGTGTCATCTGCAACATCTGCAAGAAGGAGCTCTGCAGCAAGTACTTTCTGCGCGTTCACAAGCAAAACACCCACGGCATCGTCGAGGAAGGCGCGTCTGCCGGCAAGCAGGAGAGCTTCGAGCCCCCGGCCAATTCGGACGATCTGGCTCTGAAGCCGGAGCAGCTTGGCGACCTCAACCTTCGATACATCACCCACTTTACCGAAGTCTGCCCGATCTGCAATCGCCGATTCCGCAGTCCCAAGTGGCTAAAGGTGCATTTGCAAAGCGAACACGGAAAGGCCGGGATAGACAAGTGGCGCGAGATCGAACAATACCATCAATCGACGATAAAGAGCCCCGTCCGAGTTGCCAACGTACCGAAAAGctctcagcagcagcagcagcagcaactgCAGCAGTCGCACAGCAACGCCAGTCTCAGGATACCCAACGGTTTCGAGCCGAATCAGCAAATAAGAGCAGACCTAGCCGCTCTGGGGAATCAAGTCCTATCGAACTTCTTCGGCAGCTCGAACGAAGACCAGCCGGCACAGACTTACCGCTGCTCCCAGCTTCACTGCAACTTCTCGACGTCGATCCTGCCGCTGTTCTTCCTGCACGAGAGATCCCACAGCCAGCAAGAGAACGCAGCAGCCGCCCAGGAGAGCGAGCGGCTCACTCAATGTCCGATCTGCGCTCAGAGCTTCGCCCAGCCGGAACTGCTGCGCCAGCACATCGCCACCCGGCACATGCTCAATCACGGCAGCCCGGGCCCGTTCCCGGGCCTACTCTCCCAGTTCCCCATGCCTCTCCTCGGCGAATTCGCCCTGGGcaacgagcagcagcagcagcaaccccAACACCAAGAGCGCGAGTTCGCCGAGGCGAAGGAGGAGTTCCGCCAGGCGAGTCCCCAGATAATGAACGAAATCGACACGAACAAGATGAAGAAGGCCGAGGAGAAGATGCACGCGGTCCAGGTGATGCCCCAGGGCGCCTACAAGTGCTCCCAGTGCGGCTTCGCCACCGCTAATCTCAACCGCATCAAGAAACACATCCGCAAGGATCACAAGAGCCTCGGCGATCCGGCCGAGACCGCCCTCACCGAGCTCGTCAAGACCCTCAAGGACGTGGCGAACAAGCACAAGGTGCCGGCCAGCTACGCCATGCCCCAGGACGACAAGCACTGCCCCCTGATGCAGCCCTTCATAATCGAGGAGCTCGACgccgaggagcagcagcagcggagaTTCGCGCCCGCCCTGGTTTTCCTGCCCGTCAACGCCAGGGTGAACGGCGCCCTCACCCTCTCCTTCACGCTGAACCCCGCCTGA
Protein Sequence: MSSSQETCLPESTEIDSEGSSCEERESRRRLLGDPEGLPKKRRKQSTPVKFSTSLTVGEYDESEEEQQQQQQARKNGELEGKPTSAPHLKSIQSHPKDENLNNEFRCQYCSQFFDNRVALELHLECEHNASGSGGAALPPQQQGCPSSNDSSPQVQPCLSPDASAALPLLHSEQSVSPINLSGISIRNFAATTSWLTGQSAAGRSGNHFQPTAAFPAPLAQFLPMPGFPMPDSTQIQRAAMAQFPKIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDPPINPSQANDANAASSSFVTSNSPIKLPEQPPRLLENNGLQQQQAPTLPCDMCTKRFKNEDSLRKHRQKIHLNPSNEIIDATQMQMSLPAAAGDEERQSPGGMETLFKQEYNIDQDESPYDASTPRPLDMSPPLSQANGDRLRRLGVMNPEAFCEICCKEYCNKYFLRTHKLKRHSILVPDNDKSPNAPVSGASWHQVQTSPLNLIMGDSLGNGSESGDRTEEYACRSCGIRFQTQSLYHLHLEKIHESGEQLSPRPEPEIDPMDQRTDSISEDLQKLQTMILQLNGLESNKAASCALCGKDYDTPGALRSHMITEHGVESDNLLPTQQQQQQQQQQQQLVQEKPTPAVVAQTLCTLCEREYPNQEALRKHIAEDHQPSTPTSSTTPQLPSSSVPTTPKSNPAQSVERKATASITPTSSYCEICNKELCNKYFMKTHMQKMHGIEIENGAQIGGVICNICKKELCSKYFLRVHKQNTHGIVEEGASAGKQESFEPPANSDDLALKPEQLGDLNLRYITHFTEVCPICNRRFRSPKWLKVHLQSEHGKAGIDKWREIEQYHQSTIKSPVRVANVPKSSQQQQQQQLQQSHSNASLRIPNGFEPNQQIRADLAALGNQVLSNFFGSSNEDQPAQTYRCSQLHCNFSTSILPLFFLHERSHSQQENAAAAQESERLTQCPICAQSFAQPELLRQHIATRHMLNHGSPGPFPGLLSQFPMPLLGEFALGNEQQQQQPQHQEREFAEAKEEFRQASPQIMNEIDTNKMKKAEEKMHAVQVMPQGAYKCSQCGFATANLNRIKKHIRKDHKSLGDPAETALTELVKTLKDVANKHKVPASYAMPQDDKHCPLMQPFIIEELDAEEQQQRRFAPALVFLPVNARVNGALTLSFTLNPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01112085;
90% Identity: iTF_01112909;
80% Identity: -