Basic Information

Insect: Ormyrus pomaceus
Gene Symbol: -
Assembly: GCA_900474385.1
Location: UCOM01001595.1:33157-36725[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0053 0.51 11.2 0.3 1 20 113 132 113 133 0.96

2 13 0.01 1 10.3 4.6 2 23 265 287 265 287 0.91

3 13 1.7e-05 0.0016 19.1 1.4 2 23 345 367 344 367 0.95

4 13 7.2 7e+02 1.4 7.4 3 23 451 472 450 472 0.86

5 13 0.017 1.6 9.6 1.5 1 23 521 544 521 544 0.95

6 13 0.00019 0.018 15.8 0.0 3 23 593 614 592 614 0.96

7 13 0.0035 0.34 11.8 0.1 3 23 650 671 649 671 0.94

8 13 0.0082 0.8 10.6 3.7 2 23 715 737 714 737 0.96

9 13 0.028 2.8 8.9 2.7 3 23 752 773 750 773 0.94

10 13 0.0093 0.9 10.5 0.1 2 17 818 833 818 834 0.92

11 13 3.7 3.6e+02 2.3 2.3 1 23 892 916 892 916 0.97

12 13 4.4e-05 0.0043 17.8 0.1 2 23 933 955 932 955 0.96

13 13 0.0048 0.46 11.4 0.8 1 23 1041 1064 1041 1064 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0053	0.51	11.2	0.3	1	20	113	132	113	133	0.96
2	13	0.01	1	10.3	4.6	2	23	265	287	265	287	0.91
3	13	1.7e-05	0.0016	19.1	1.4	2	23	345	367	344	367	0.95
4	13	7.2	7e+02	1.4	7.4	3	23	451	472	450	472	0.86
5	13	0.017	1.6	9.6	1.5	1	23	521	544	521	544	0.95
6	13	0.00019	0.018	15.8	0.0	3	23	593	614	592	614	0.96
7	13	0.0035	0.34	11.8	0.1	3	23	650	671	649	671	0.94
8	13	0.0082	0.8	10.6	3.7	2	23	715	737	714	737	0.96
9	13	0.028	2.8	8.9	2.7	3	23	752	773	750	773	0.94
10	13	0.0093	0.9	10.5	0.1	2	17	818	833	818	834	0.92
11	13	3.7	3.6e+02	2.3	2.3	1	23	892	916	892	916	0.97
12	13	4.4e-05	0.0043	17.8	0.1	2	23	933	955	932	955	0.96
13	13	0.0048	0.46	11.4	0.8	1	23	1041	1064	1041	1064	0.98

Sequence Information

Coding Sequence: ATGTCCTCGAGCCAGGAGACATGCCTACCAGAGTCGACGGAGATCGATAGCGAGGGTTCGAGCTGCGAGGAGCGAGAGTCCCGCAGGCGGCTCCTCGGCGATCCCGAAGGCCTGCCCAAGAAGCGGCGGAAGCAGTCGACGCCCGTCAAGTTCTCGACCTCGCTCACCGTCGGCGAGTACGACGAGTCCGaagaggagcagcagcagcagcagcagcaacagccgACCGTCGACCAACAAGCGAGGAAGAACGGCGAGCTGGAAGGTAAGCCGACGAGCGCGCCGCACCTCAAGTCCATCCAGAGCCATCCGAAAGACGAGAATCTGAACAATGAATTTCGCTGCCAGTATTGTAGTCAATTTTTCGATAACCGCGTCGCGCTCGAGCTGCACCTCGAGTGCGAGCACAACGCCTCGGGCAGCGGGGCCGCCGCGCTGCAGGGCTGCCCCTCGAGCAACGACAGCTCGCCGCAGGTGCAGCCCTGCCTCAGCCCGGACGCGAGCGCGGCCCTGCCGCTCCTCCACTCCGAGCAGTCCGTCAGTCCCATCAACCTCTCGGGCATCAGTATCCGAAACTTCGCGGCCACCACCTCCTGGCTGACGGGCCAGAGCGAGGCCAACTCGCTGGCCAAGCTCGCGGCCGGCAGGGCCGGCAACCACTTTCAGCCGACGGCGGCCTTCCCCGCTCCCCTGGCCCAGTTCCTGCCGATGCCCGGCTTCCCCATGCCGGACTCCACGCAAATCCAGCGGGCTGCCATGGCCCAGTTCCCAAAGATATTCAATCCCGACGCGTACTGTGATCTCTGTAATAAGGAATTTTGCAACAAGTACTTTCTTAAGACGCACAAGGCCAACAAGCACGGAATCTACGTCGATCCGCCGATCAATCCATCCCAAGCGAACGACGGCAGCGCGGCCTCGAGCTCCTTCGTCACCAGCAATTCGCCCAGCAACTTGACGAGCGTCAAGCTGCCCGAGCAGCCGCCGAGGCTCGATAACAACGGGCTCCTGCAGCAGCAGGCCCCGACTCTACCCTGTGATATGTGCACCAAGCGCTTCAAGAACGAGGACTCACTGAGAAAGCACAGGCAGAAGATTCACCTGAATCCGAGCAACGATATCATCGATTCCACGCAAATGCAAATGAGCctgccggccgccgccgccggcgacgAGGAACGACAGAGCCCCGGCGGCATGGAAACCCTCTTCAAACAAGAGTACAACATCGATCAAGACGAGTCGCCCTACGACGCCTCGACCCCGAGACCTCTGGACATGTCGCCTCCTCTGTCCCAAGCCAACGGAGATCGGTTGAGACGCCTGGGCGTCATGAATCCCGAGGCGTTCTGCGAGATCTGCTGCAAGGAGTACTGCAACAAGTACTTCCTTCGCACCCACAAGCTCAAGAGGCACTCCATCCTCGTGCCCGACAACGATAAATCGCCGAATCCCCCCGTCTCCGGGGCCAGCTGGCATCAAGTGCAAACGAGCCCTCTGAACCTCATCATGGGCGACAGCCTGGGAAACGGATCGGAGTCCGGCGACCGCACCGAGGAATACGCCTGCCGATCCTGCGGCATACGCTTCCAGACTCAGAGCCTCTATCACCTGCATCTCGAAAAGATTCACGAGAGCGGCGAACAGCTGTCGCCGAGGCCCGAGCCGGAAATCGATCCGATCGACCAGAGAACCGACTCCATCTCCGAGGATCTTCAGAAGCTCCAGACCATGATTCTCCAGCTGAACGGTCTCGAATCGAACAAAGCAGCTTCCTGCGCACTTTGCGGCAAGGACTACGACACCCCCGGCGCGCTCAGGAGTCACATGATCACCGAACACGGCGTCGAGTCGGACAATTTGATACCAacgcagcagcaacagcagcagcagcagcagcaactaGTCCAAGAGAAGCCGGCTCCCGCTGTCGTCGCGCAAACGCTCTGCAGCCTCTGCGAGAGGGAGTACCCCAACCAAGAAGCCTTGAGAAAACATATCGCGGAGGACCACCAGCCGTCGACGCCCACGAGCTCGACGACGCCTCAGCTCCCGTCGTCCTCGGTGCCTACGACCCCGAAATCCAACCCCGCCCAGTCGGCGGAGAGGAAGGCCACCGCTTCCATCACTCCCACCTCGAGCTACTGCGAGATCTGCAACAAGGAGCTCTGCAACAAATACTTCATGAAGACCCACATGCAGAAGATGCACGGAATCGAGATCGAGAACGGGGCGCAGATCGGCGGCGTTATCTGCAATATCTGCAAGAAGGAGCTCTGCAGCAAGTACTTTCTCCGCGTTCACAAGCAAAACACCCACGGCATCGTCGAGGAGGGCGCCTCCGCCGGCAAGCAGGAGAGCTTCGAGCCGCCGGCTAATTCGGACGATCTGGCTCTGAAGCCCGAGCAGCTTGGCGACCTCAACCTTCGATACATCACCCACTTTACGGAGGTCTGCCCGATCTGCAATCGCCGATTCCGCAGTCCCAAGTGGCTGAAGCTctcaacagcagcagcagcagcacaacTGCAGCAGTCGCACGGCAGCGCCAGTCTCAGGATACCCAACGGTTTCGAGCCGAATCAGCAAATAAGAGCAGACCTAGCCGCTCTGGGGAATCAAGTCCTCTCGAACTTCTTCGGCAGCTCGAACGAAGACCAGCCGACCCAGACCTACCGCTGCTCCCAGCTTCACTGCAACTTCTCGACCTCGATCCTGCCGCTGTTCTTCCTGCACGAGAGGTCCCACAGCCAGCAAGAGAACGCGGCGGCCGCCCAGGAGAGCGAACGGCTCACCCAGTGTCCGATCTGCGCCCAGAGCTTCGCCCAGCCGGAACTGCTCCGTCAGCACATCGCCACCCGGCACATGCTCAATCACGGCAGCCCGGGCCCCTTCCCGGGCCTCCTCTCCCAGTTCCCCATGCCTCTCCTCGGCGAATTCGCCCTGGGCAAcgagcaacagcagcagcaaccccAACACCAACCCCAAGAGCGCGAGTTCGCCGAGGCGAAGGAGGAGTTCCGCCAGTCGAGTCCCCAGATAATGAACGAAATCGACACGAACAAGATGAAGAAGGCCGAGGAGAAGATGCACGCGGTCCAGGTGATGCCCCAGGGCGCCTACAAGTGCTCCCAGTGCGGCTTCGCCACCGCCAATCTCAACCGCATCAAGAAGCACATACGCAAGGATCACAAGAGCCTCGGCGACCCGACCGAGACCGCCCTCACCGAGCTCGTCAAGACCCTCAAGGACGTCGCCAACAAGCACAAGGTGCCCGCGAGCTACGCCATGCCCCAGGACGACAAGCACTGCCCCCTGATGCAGCCCTTCATAATCGAGGAGCTCGACgccgaggagcagcagcagcgccgatTCGCGCCCGCCCTGGTTTTCCTGCCCGTCAACGCCAGGGTCAACGGCGCCCTCACCCTCTCCTTCACGCTTAACCCCGCCTGA
Protein Sequence: MSSSQETCLPESTEIDSEGSSCEERESRRRLLGDPEGLPKKRRKQSTPVKFSTSLTVGEYDESEEEQQQQQQQQPTVDQQARKNGELEGKPTSAPHLKSIQSHPKDENLNNEFRCQYCSQFFDNRVALELHLECEHNASGSGAAALQGCPSSNDSSPQVQPCLSPDASAALPLLHSEQSVSPINLSGISIRNFAATTSWLTGQSEANSLAKLAAGRAGNHFQPTAAFPAPLAQFLPMPGFPMPDSTQIQRAAMAQFPKIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDPPINPSQANDGSAASSSFVTSNSPSNLTSVKLPEQPPRLDNNGLLQQQAPTLPCDMCTKRFKNEDSLRKHRQKIHLNPSNDIIDSTQMQMSLPAAAAGDEERQSPGGMETLFKQEYNIDQDESPYDASTPRPLDMSPPLSQANGDRLRRLGVMNPEAFCEICCKEYCNKYFLRTHKLKRHSILVPDNDKSPNPPVSGASWHQVQTSPLNLIMGDSLGNGSESGDRTEEYACRSCGIRFQTQSLYHLHLEKIHESGEQLSPRPEPEIDPIDQRTDSISEDLQKLQTMILQLNGLESNKAASCALCGKDYDTPGALRSHMITEHGVESDNLIPTQQQQQQQQQQLVQEKPAPAVVAQTLCSLCEREYPNQEALRKHIAEDHQPSTPTSSTTPQLPSSSVPTTPKSNPAQSAERKATASITPTSSYCEICNKELCNKYFMKTHMQKMHGIEIENGAQIGGVICNICKKELCSKYFLRVHKQNTHGIVEEGASAGKQESFEPPANSDDLALKPEQLGDLNLRYITHFTEVCPICNRRFRSPKWLKLSTAAAAAQLQQSHGSASLRIPNGFEPNQQIRADLAALGNQVLSNFFGSSNEDQPTQTYRCSQLHCNFSTSILPLFFLHERSHSQQENAAAAQESERLTQCPICAQSFAQPELLRQHIATRHMLNHGSPGPFPGLLSQFPMPLLGEFALGNEQQQQQPQHQPQEREFAEAKEEFRQSSPQIMNEIDTNKMKKAEEKMHAVQVMPQGAYKCSQCGFATANLNRIKKHIRKDHKSLGDPTETALTELVKTLKDVANKHKVPASYAMPQDDKHCPLMQPFIIEELDAEEQQQRRFAPALVFLPVNARVNGALTLSFTLNPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01111243; iTF_01110410; iTF_01112909; iTF_01113690;
90% Identity: iTF_01112909;
80% Identity: -