Onit020374.1
Basic Information
- Insect
- Ormyrus nitidulus
- Gene Symbol
- Hr39
- Assembly
- GCA_900474335.1
- Location
- UCOL01001781.1:4533-12326[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2 3.1e+04 -16.8 24.9 40 200 224 396 206 412 0.37 2 4 2 3.1e+04 -6.8 9.6 64 103 380 419 338 435 0.61 3 4 2.8e-47 4.2e-43 149.0 5.1 1 322 529 839 529 839 0.64 4 4 4e-16 6.1e-12 46.4 0.0 347 408 837 898 837 898 0.97
Sequence Information
- Coding Sequence
- ATGTCCGATCAGAGCGGGcccggggcggcggcggcgtcggcggcggcggagcagCCTGGCCCCGCCTGGTGGCCGCCCGCCCAGCCCTGGAAGTCGTCCGGCTCGGGCCAGCCGGGCCAGGggacgagcggcggcgcgcgcacccAGCCCGAGCCCGGGAAGAACGTCTCCGTCACCACGATTAACGTGCCACCGCCCCTTCACGAGATGCACGACGGCAAGAGCGTGTGCAAGTATCTGGGCGGTCAGAACGGCGTGACGGTGTCGGTGGTGTCGACGAGCTCCCTGGCGACGGAGTCCGAGGAGGCAGACGCCGACAGCGACGGCGAGGTGAGCCGCATCGACTTTCGCGGCGTCAACCTGCGCACGAAGAAGAAGCGCGACGGCTCGCTCGAGCCCGGCGACAGCAGCTGCGATCAGGCTCACCAGCAGCCCGAGCGGCCAATGTCCTGGGAGGGCGAGCTCTCCGACCAAGAAATGTCTTCCAATACTATCACCAACCAGGACCACGAAGAAACGTCAATGGAGGGCGTCCAGGTGTGCAGCTCGAGTCCAGGGCCGCAGGAGCAGAAGTTCCCGATCAAGCCGGAGCCGGACTTCCGCTCGAGTCCGGGGCTCCAGAGCCTCGGCGGCAACTCCCTGAACGAGACGATCGTCGCAGTCTCCCACGTCCAGCAGCTCCACCAGCAGCACCACCAGCAGGCCCACCAGCAGGCCCAGGGCCAGCAGCAGAGCATCGAGCAGAGCCAGCAGAGCGACTTGCCCCTGCTCGTCGGCAAGCTCCTCGGCGGCTGCAACAGCTCCACGCCCAATCACAGTCCCGTACTCGTTCCCCGGCACCACCTCACCAAGCACAGCCACACCAGATCTCAAGTCCCATCGCCCGACTCAGCAATCCACTCGGCCTACAGCGTGTTCAGCTCGCCGACGCAGTCGCCGCACGCGGGCCGTCACTCGGCGCTCGGTCCGGGTTCCCCGGTGCCCTCGTCCTCCCTGTCGCTGTCGCGGCACAGCTTCAACAATTCGACGTCCTCGCtgtcgctctcgctctcgcactCGCTCTCGCGCAACAACTCGGACGCCTCGAGCAGCTGCTACAGCTACGGCTCGCTCAGCCCGCCGACGCACTCGCCGGTCCAGCAGCGGCACGCGCACCACCAcgcggcgcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcaccaggcCAGCGCGCTGCACCTGCCAGCCCAGGGGCATCATTACAGCGCGGCTCCCGGCATCGTCGGAGACGTCGCCGACCCGCACCTCGATGACCAGGACGACTGCAGGATACCCTCGGCACCCTCCGGGATCTCCACCAGGCAGCAGCTTATCAACAGTCCTTGTCCGATTTGTGGGGACAAAATCAGTGGCTTCCATTACGGGATATTCTCGTGCGAATCTTGTAAGGGTTTCTTCAAAAGAACGGTGCAAAACCGCAAAAACTACGTGTGCCTTAGGGGCGCTGGCTGTCCGGTGACGGTCGCCACGCGCAAAAAGTGTCCAGCCTGCCGTTTCGACAAGTGCCTAAACATGGGCATGAAGCTGGAGGCGATACGCGAGGACCGTACACGCGGCGGTCGCAGCACTTATCAGTGCACCTACACGCTGCCGGCGAATCTGATGGGCGGCTCGGCCGCTGGTGGCCTCACCGCCGATAAACTGGCCCAGGGTGGCGGCCCCTGCAGTCCAGCGCCGCCCGGCAGCGGCGAGCATCATCACTCGATGAAGCATCACTCGAATCATTCCCACAAGATGCAGGTGGTGCCGCAGCTGCTGCAAGACATTATGGACGTCGAGCACCTCTGGCATTATAATGACAACGACAGACTCGGCAGCAGCAGTCAGTCTGCGAGCTCGTTTAATCTCGCTCAGtcttTACCCAATGCCGGAATGGGTAGCAGTACGAGTGGCAATAGTAGCAGCGGCGACTCGTTGAGCGGCTTAGGTGTACCGAACGGCCTGGGCAGTAGCGGCAGCAGTAATCTCGGTAGCTCGAACACAAATGGGAACGTAGTTAACAGCAGATCGGATGGCGTGCGATCGAATTCGTCCGGTTCGGCGACATCGACTCCGACCCAcgagcagcaacagcagcactCGCCCTTGTCGAACAGTGAAGCGAGCTCGAGCTGCTCGGCGAACGGCAATCCTGACTTTTTATCGAATCTGTGCAATATAGCTGATCATCGGCTTTACAAGATCGTCAAGTGGTGTAAGAGTCTGCCACTCTTTAAGAACATTTCCATCGACGACCAGATCTGCCTGCTGATCAACTCGTGGTGCGAGCTGCTGCTCTTCTCCTGCTGCTTTCGCAGCATGAGTACGCCCGGGGAGATAAGGGTGTCACTCGGCAAGTCCATCACTCTTGAGCAGGCTAGACAACTCGGTCTCGCTACCTGCATCGAGAGGATGCTGGCTTTCACGAGTAATCTAAGGCGTCTCAAGGTCGACCAGTACGAGTATGTCGCCATGAAGGCGTTGCAACAGTACACAATAGCGAGGTATCCTGAGATGCCTGCAAAATTTGGCGAACTGTTACTTCGAATTCCGGATCTCCAGCGTACTTGCCAAGCTGGAAAGGAACTACTAAGCACGAAACGCGCTGAAGGCGAAGGGTATTCCTTCAATCTCCTAATGGAACTGCTTAGAGGGGAccactga
- Protein Sequence
- MSDQSGPGAAAASAAAEQPGPAWWPPAQPWKSSGSGQPGQGTSGGARTQPEPGKNVSVTTINVPPPLHEMHDGKSVCKYLGGQNGVTVSVVSTSSLATESEEADADSDGEVSRIDFRGVNLRTKKKRDGSLEPGDSSCDQAHQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCSSSPGPQEQKFPIKPEPDFRSSPGLQSLGGNSLNETIVAVSHVQQLHQQHHQQAHQQAQGQQQSIEQSQQSDLPLLVGKLLGGCNSSTPNHSPVLVPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAGRHSALGPGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQRHAHHHAAQQQQQQQQQQQQQQQHQASALHLPAQGHHYSAAPGIVGDVADPHLDDQDDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLMGGSAAGGLTADKLAQGGGPCSPAPPGSGEHHHSMKHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRLGSSSQSASSFNLAQSLPNAGMGSSTSGNSSSGDSLSGLGVPNGLGSSGSSNLGSSNTNGNVVNSRSDGVRSNSSGSATSTPTHEQQQQHSPLSNSEASSSCSANGNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTSNLRRLKVDQYEYVAMKALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSTKRAEGEGYSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00079965;
- 90% Identity
- iTF_01111051; iTF_01111802; iTF_01111853; iTF_01110205; iTF_01110157; iTF_01112702; iTF_01112634; iTF_01113504; iTF_01113464;
- 80% Identity
- iTF_01111051;