Basic Information

Insect: Ophraella communa
Gene Symbol: stc
Assembly: GCA_035357415.1
Location: CM068991.1:16398717-16406887[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.59 2e+04 -1.9 1.0 4 10 8 14 7 15 0.68

2 8 1.3e-08 0.00042 22.7 17.4 1 18 20 37 20 38 0.97

3 8 0.68 2.3e+04 -2.0 0.8 5 10 66 71 66 72 0.78

4 8 0.0011 35 6.9 10.7 1 19 77 94 77 94 0.91

5 8 1.8 5.9e+04 -3.4 0.4 9 11 112 114 112 115 0.74

6 8 1.7e-09 5.6e-05 25.5 13.7 1 19 130 149 130 149 0.97

7 8 0.00077 26 7.4 16.2 1 18 159 177 159 178 0.93

8 8 1 3.5e+04 -2.6 0.5 4 9 289 294 288 294 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.59	2e+04	-1.9	1.0	4	10	8	14	7	15	0.68
2	8	1.3e-08	0.00042	22.7	17.4	1	18	20	37	20	38	0.97
3	8	0.68	2.3e+04	-2.0	0.8	5	10	66	71	66	72	0.78
4	8	0.0011	35	6.9	10.7	1	19	77	94	77	94	0.91
5	8	1.8	5.9e+04	-3.4	0.4	9	11	112	114	112	115	0.74
6	8	1.7e-09	5.6e-05	25.5	13.7	1	19	130	149	130	149	0.97
7	8	0.00077	26	7.4	16.2	1	18	159	177	159	178	0.93
8	8	1	3.5e+04	-2.6	0.5	4	9	289	294	288	294	0.80

Sequence Information

Coding Sequence: ATGTGTTGTATAGAAATCGAACATGTATGTCCACTTCCATGTAATCGACTTTTATCTTGTGGCCAACACAGATGTCAACGCACATGCCATTCTGGTCATTGTCCAGCATGCGAAGAAACTAGCTTTGAAGAACTCTTTTGCGAATGTGGCGAAAGCGTAATATATCCACCGATTCCATGCGGTACCAAGCCGCCTAATTGTACCAAACCATGTTCGAGACCACGACCATGTGGACATAACGTAAATCATTCCTGTCATATAGGAGCTTGTCCTCCTTGTACGGTTTTATGTAAACGTTGGTGCTACGGACATCACGAGCAAAGATCGGCTATTCCTTGTCACCAAGAATATTTCAGTTGCGGTTTACCATGCGGCAAGGATTTATCGTGCGGGCGGCATAAGTGCATTAAGTCTTGCCACGATGGACCGTGTCCTCTACCATGCAAACAATCTTGTACCGTTCCTAGGGAGTTGTGTGGACACCCTTGTAATAGgccATGTCACGAACCCCCATGCCCTGAAAGTAGTTGTAAACAGCTTGTTAATGTAACTTGTCAATGTGGATTACAAAAAACCACAAGACCATGCATAGAAGTAGcagatgaatttaaaaatattcaaatggcTCAATTGAAAGAAAAAATGGGCAGTTTGTCCACCAGTTCTACAATAGATttatcagatattttaaaagTGCCCCAAAAACCAACTGTGCTTAAAATctTAGAATGTACCGAAGAATGCAGAGTTTTAGAGAGAAATAGAAGACTAGCAATTGGTTTACAGATTCGCAATCCAgatttaagtcaaaaactaactCCGCGCTATTCGGACTTTTTACGTCAATGGGCCAAAAAGGATCATCATTTTTGTCAAAAAGTACATGACAAGTTAACCGAATTGGTCCAATTAGCTAAAAACAGTAAACAGAAGAGCCGCTCTTATTCATTTGAATCGATGAATCGAGATAAACGACATTTTATTCACGAGTATTGTGAACATTTTGGGGTCGAAAGTGCAGCTTATGACATGGAACCAAATAGAAATATTGTAGCTACAGCCATCAAAGATAAATCTTGGTTACCGAGTATGAGCTTATTAGAATTCATTCAAAGGGAAAACGGACAGAGAAAAGTACCTGGACCGGTGCTGGGGCGCGGCACAAGTGCCAAAATGGAAACGGTGTCTTTGAAATTGCCTAGTAGAGTTCAAAGACCGAATACTCCACCTAATGAAACtgttgattattttaaaacctcGTAA
Protein Sequence: MCCIEIEHVCPLPCNRLLSCGQHRCQRTCHSGHCPACEETSFEELFCECGESVIYPPIPCGTKPPNCTKPCSRPRPCGHNVNHSCHIGACPPCTVLCKRWCYGHHEQRSAIPCHQEYFSCGLPCGKDLSCGRHKCIKSCHDGPCPLPCKQSCTVPRELCGHPCNRPCHEPPCPESSCKQLVNVTCQCGLQKTTRPCIEVADEFKNIQMAQLKEKMGSLSTSSTIDLSDILKVPQKPTVLKILECTEECRVLERNRRLAIGLQIRNPDLSQKLTPRYSDFLRQWAKKDHHFCQKVHDKLTELVQLAKNSKQKSRSYSFESMNRDKRHFIHEYCEHFGVESAAYDMEPNRNIVATAIKDKSWLPSMSLLEFIQRENGQRKVPGPVLGRGTSAKMETVSLKLPSRVQRPNTPPNETVDYFKTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00328841; iTF_00111255; iTF_01311248;
90% Identity: -
80% Identity: -