Agla007786.1
Basic Information
- Insect
- Anoplophora glabripennis
- Gene Symbol
- stc
- Assembly
- GCA_000390285.2
- Location
- NW:1070-5576[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 4.7e-06 0.023 14.4 13.9 4 19 15 30 8 30 0.87 2 11 0.89 4.3e+03 -2.4 2.0 5 10 59 64 59 64 0.93 3 11 0.0029 14 5.5 9.3 1 11 70 80 70 81 0.96 4 11 0.8 3.9e+03 -2.3 0.8 4 10 85 91 84 92 0.62 5 11 1.7e-10 8.2e-07 28.6 14.5 1 18 97 114 97 115 0.99 6 11 0.76 3.7e+03 -2.2 0.6 6 10 144 148 143 149 0.80 7 11 0.00043 2.1 8.2 13.6 1 19 154 171 154 171 0.87 8 11 0.13 6.3e+02 0.2 0.3 6 11 174 179 174 180 0.94 9 11 2.1 1e+04 -3.6 0.4 9 11 189 191 189 192 0.74 10 11 2.2e-08 0.00011 21.9 18.3 1 19 207 226 207 230 0.95 11 11 0.014 69 3.3 16.9 1 18 236 254 236 255 0.89
Sequence Information
- Coding Sequence
- ATTTGTGGAAATGTGCTCAAATGTGGACAACCAAGCTTACCTCATAAATGTAGAGAAAACTGTCATGAAGGGGACTGCCCCAAATGCCCCCTAACCACTGTAGTAAGATGCCGATGTGGACATATGGATAAGGAATTGCCGTGCCAACAATTAACTTCTAAAGCTGATGATGCTAGATGTGAGAAGAAATGCACAAAGAAACGTACATGTGGTAAACACAAATGCAATCAACGTTGTTGCATAGAAATTGAGCACTTCTGTCCTCTTCCTTGCAACCATCAGCTTTCGTGTGGCCAACACAGATGTGAACGTACCTGTCATTCTGGTCGATGTCCTCCTTGTATTGAAACGAGTTTTGAGGAATTATATTGCGAATGTGGTGCGAGCGTTTTGTATCCACCTGTTCCATGTGGAACTAAACCACCGGCTTGTAATAAGCCTTGCTCAAGGCAACGTCCATGTGGACACAACGTAAACCATAACTGCCACACTGGCCCTTGCCCTCCATGCACCGTCCTCTGTAAGAGATGGTGCCATGGACATCACGAGCAACGTTCAGCCATTCCCTGTCATCAAGAAAACTTCAGCTGTGGTTTACCTTGTGGTAAGCCAATGCCTTGTGGAAGACACAGATGTAACAAACCCTGTCACGAGGGTCAGTGTCCTTTGCCTTGCAAGCAACCTTGCAGTATTCAGAGGACCTTGTGCGGACATCCTTGTGGTAGACCGTGTCACAGTCCTCCTTGCCCTGAAAGCAATTGCAAGCAGAACGTACCAGTTACCTGTGCATGTGGCCTTCAGAAAGGTATCAGACCTTGCATAGAGGTATCggaggaatttaaaaatattgaaatggcTAAATTAAAGGAGAAAATTGGTGATTTGTCGAAGGACCAGACTGTAGATATTTCGGACCTATATAAGCCGAAGAAACCAACTGTTCTTAAAGTACTGGAATGTACCGAAGAATGTCGTGTTTTGGAAAGAAATAGAAGACTTGCTATTGGCCTACAAATCCGTAATCCTGATTTAAGTCAAAAACTAACACCAAAATATACAGATTTTATGAAGCAGTGGGCAAAAAAAGATCCACATTTTTGCCAAAAAGTACACGACAAATTAACTGAGCTAGTTCAACTGGCAAAGCAAAGCAAACAGAAAAGTCGCTCCTATTCTTTTGACTCCATGAACAGGGACAAAAGACATTTCATCCATGAATACTGCGAACATTTTGGTGTGGAAAGTGCTGCTTATGATACAGAACCAAATAGGAACATTGTAGCCACGGCTGTTAAAGATAAATCCTGGTTACCAAGTATGAGTTTGTTAGAAGTTATTCAGAGAGAGAATGGACAGAGGAAGGTACCTGGACCTTCCGTTCTTGGCAGAAGTACAGCAACCAAACCAGAAATCGTTTCTTTGCGATTGCCCTGCCAAACACAGAGACCAAACATGCATCCAGGTGAAATCATTGATTACTTTGATTCGCCGCCacaattataa
- Protein Sequence
- ICGNVLKCGQPSLPHKCRENCHEGDCPKCPLTTVVRCRCGHMDKELPCQQLTSKADDARCEKKCTKKRTCGKHKCNQRCCIEIEHFCPLPCNHQLSCGQHRCERTCHSGRCPPCIETSFEELYCECGASVLYPPVPCGTKPPACNKPCSRQRPCGHNVNHNCHTGPCPPCTVLCKRWCHGHHEQRSAIPCHQENFSCGLPCGKPMPCGRHRCNKPCHEGQCPLPCKQPCSIQRTLCGHPCGRPCHSPPCPESNCKQNVPVTCACGLQKGIRPCIEVSEEFKNIEMAKLKEKIGDLSKDQTVDISDLYKPKKPTVLKVLECTEECRVLERNRRLAIGLQIRNPDLSQKLTPKYTDFMKQWAKKDPHFCQKVHDKLTELVQLAKQSKQKSRSYSFDSMNRDKRHFIHEYCEHFGVESAAYDTEPNRNIVATAVKDKSWLPSMSLLEVIQRENGQRKVPGPSVLGRSTATKPEIVSLRLPCQTQRPNMHPGEIIDYFDSPPQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106861;
- 90% Identity
- -
- 80% Identity
- -