Ocom015519.1
Basic Information
- Insect
- Ophraella communa
- Gene Symbol
- gata5-b
- Assembly
- GCA_035357415.1
- Location
- CM068979.1:72382435-72416406[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-18 4.8e-14 54.1 2.7 1 34 147 179 147 181 0.97 2 2 1.2e-18 2.5e-14 55.0 4.9 1 35 201 234 201 235 0.97
Sequence Information
- Coding Sequence
- ATgcaaatagaaaaagaagacaATAATGAAAGTGATAATAAtcCATTGTATTCGAGGGGGGCTGGTTCTTACACAGCAGGAACCATGCCGTATTACAACAGTTCCCCAGAATTGACCACACAACCATCACAACTATGGACCAATAATGGTGTAAATACCACGGGAACATTGTCTTTGTCAGAAGAATATCCCAAAGTAACCTCATCTTCAACGTCCTTACCCGGTTTTAGTAGATTACCGACAACGTTCACCAATAATCACAATCATCACAGAAGTAATTCATATTTACCGAATGCCATTTACAGCGATTGGCCGGCTTATGCAACAGATCAATATAATCTTAACTCTTCCACTCAAAGAAACCGGCCAATTTCAGCTGCGGCTTCCCTCTCTGCAATTGATCCACGCACAGCGGAATTCTTCACGGAAGGTAGGGAATGCGTCAATTGTGGCGCTATTGATACCCCTCTGTGGCGCAGAGATGGAACCGGCCATTATCTTTGCAATGCGTGTGGCCTTTACCACAAGATGAATGGCATGAATCGACCTCTTGTCAAGCAGCCTCGCAGATtgTCTGCTTCTCGCCGAGCTGGTCTCACTTGTACCAATTGTCACACTAGTACCACTTCCCTATGGAGAAGAAACGCCTTAGGAGAACCGGTTTGTAATGCTTGTGGACTCTACTACAAACTGCATTCTGTGAATAGGCCTCTGTCTATGAAGAAGGATAGTATACAGaCTAGGAAAAGAAAACCAAAAGGTAGTAAAGAATCTAGCGCTAGTAGTACTCACATTCCGAGAAATCTCAGCCATACACCATCATTGCCGACAATAAAAATGGAAGAAGTAGGTGTAAAATTAGAACACTGCTCAATTGaaaactaCGGTGGTGATATGAGGACGGTAACTTCAATGAATCAACTGCAACATACTTCAACTCCTAGTTATTCATACACACCTCAAGCTCACCAACGATTGAGCCCCACTTACACTTCGCAATCATCACCTCAATTGACACAGACTCACTACTACGATTCGATTCTTCAGCAACCCAGTCCCAGTCCGGCATCAGACGAATCCGACAGTTCCCTAAATgccaacaacaataataataacactAAAGTAATTATTAACGGAGAACATTGTATCGATAGACCCACCGTGGTATCTTTATCAtcataa
- Protein Sequence
- MQIEKEDNNESDNNPLYSRGAGSYTAGTMPYYNSSPELTTQPSQLWTNNGVNTTGTLSLSEEYPKVTSSSTSLPGFSRLPTTFTNNHNHHRSNSYLPNAIYSDWPAYATDQYNLNSSTQRNRPISAAASLSAIDPRTAEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCHTSTTSLWRRNALGEPVCNACGLYYKLHSVNRPLSMKKDSIQTRKRKPKGSKESSASSTHIPRNLSHTPSLPTIKMEEVGVKLEHCSIENYGGDMRTVTSMNQLQHTSTPSYSYTPQAHQRLSPTYTSQSSPQLTQTHYYDSILQQPSPSPASDESDSSLNANNNNNNTKVIINGEHCIDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00911562; iTF_00736285; iTF_01047927;
- 90% Identity
- -
- 80% Identity
- -