Lcap021430.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- gata5-b
- Assembly
- GCA_949126875.1
- Location
- OX421401.1:26123744-26141134[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-18 2.4e-14 54.3 2.7 1 34 108 140 108 142 0.97 2 2 3.1e-18 2.3e-14 54.3 5.2 1 35 162 195 162 196 0.97
Sequence Information
- Coding Sequence
- ATGAAAAGggcattggaaataaagtaCGTAGGAGTAAACGCAACGGGTACGTTATCCATACCAGATGATTATCCGAAAGTAACGTCTTCTTCGACGACACTTCCCGGTTTTAGTAGATTACCTACGTTTACTAACAATCACAATCATCATCGAAGCAATACTTACTTACCGAATAATGCCATTTATGGCGAATGGCCGGCGTATACAACAGATCAATACGGTCTCAACCCTAACGGTCAACGGAATCGACCTATGTCGGCTGCTGCTTCTTTGTCTGCAATTGATCCACGTACCACGGAATTCTTCACAGAAGGTAGGGAATGTGTCAATTGCGGCGCTATTGATACCCCTTTGTGGCGTAGAGATGGGACCGGTCATTATCTATGCAATGCATGTGGCCTTTACCACAAGATGAACGGCATGAATCGGCCTCTTGTCAAGCAGCCTCGCAGATTgTCTGCTTCTCGTCGAGCTGGTCTCACGTGCACCAATTGCAACACCAGCACTACTTCGCTGTGGAGAAGAAACGCTTTAGGAGAACCAGTTTGCAATGCATGTGGACTGTATTATAAACTACACTCTGTAAATAGGCCTCTATCTATGAAGAAGGATAGTATACAGacaagaaaaagaaaaccaAAAGGTAGTAAAGAATCTAATGGTAATAGTGCTCACATTCCAAGAAATCTCAGTCATACACCGTCTCTACCAGCTATAAAAATGGAGGAAGTCGGTGTAAAATTAGAACACTGTTTAATAGaaaactaCGGCGGAGGAGATATGAGAACGGTAACATCAATGAACCAGCTCCAACATACATCAACTCCTAGTTATTCTTACACATCACAATCTCATCAACGATTGAGTCCCACTTATGCATCTCAAACGTCACCGCAATTAACGACACAATCTCACTTCTACGACTCGATGCCTCAACAACCCAGTCCCAGTCCGGCTTCAGACGAATCCGACAGTTCTCtcaacaataacaataacacCAAAGTCATCATCAACGGTGAACATTGCATCGATAGACCAACCGTAGTTTCTCTATCatcataa
- Protein Sequence
- MKRALEIKYVGVNATGTLSIPDDYPKVTSSSTTLPGFSRLPTFTNNHNHHRSNTYLPNNAIYGEWPAYTTDQYGLNPNGQRNRPMSAAASLSAIDPRTTEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCNTSTTSLWRRNALGEPVCNACGLYYKLHSVNRPLSMKKDSIQTRKRKPKGSKESNGNSAHIPRNLSHTPSLPAIKMEEVGVKLEHCLIENYGGGDMRTVTSMNQLQHTSTPSYSYTSQSHQRLSPTYASQTSPQLTTQSHFYDSMPQQPSPSPASDESDSSLNNNNNTKVIINGEHCIDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106853;
- 90% Identity
- iTF_00736285;
- 80% Identity
- -