Gnym015704.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- gata5-b
- Assembly
- GCA_963978555.1
- Location
- OZ021708.1:1336627-1355780[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-18 1.9e-14 54.1 2.7 1 34 143 175 143 177 0.97 2 2 3.6e-18 1.8e-14 54.1 5.2 1 35 197 230 197 231 0.97
Sequence Information
- Coding Sequence
- ATGGATTTAAACTTTTTGCAACAACACAATCCATTGTATTCGAGGGGGGCTGGTACATACGCAGCTGGGACAATGTCATATTATAACAGTTCTCCGGAGTTAACTACACAACCATCACAATTGTGGACGAATAATGGTGTGAACGCAACGGGTACGTTATCCATACCAGAGGATTATCCGAAAGTAACGTCTTCTTCGACTACACTTCCCGGTTTTAGTAGATTACCCACGTTTACCAACAATCACAATCACCATCGCAGCAATACTTATTTGCCGAATAATGCCATTTACGGCGAATGGCCGGCGTATACGACAGACCAATATGGTCTCAACCCTACCAGTCAACGAAACCGACCAATATCAGCTGCTGCTTCTTTGTCTGCaaTTGATCCACGTACCACGGAATTCTTCACAGAAGGTAGGGAATGTGTCAATTGCGGCGCTATTGATACCCCTTTGTGGCGTAGAGATGGGACCGGTCATTATCTATGCAATGCATGTGGCCTTTACCACAAGATGAACGGCATGAATCGGCCTCTTGTCAAGCAGCCTCGCAGATtgTCGGCTTCTCGTCGAGCTGGTCTCACGTGCACCAATTGCAACACCAGCACCACCTCGCTGTGGAGGAGAAACGCTCTAGGAGAACCAGTCTGCAATGCATGTGGACTGTATTATAAGCTTCACTCTGTAAATAGGCCTCTATCTATGAAGAAGGATAGTATACAGacAAGGAAGAGAAAACCAAAAGGTAGTAAAGAATCTAATGGTAATAGTGCCCACATTCCAAGAAATCTAAGCCATACACCGTCTCTACCAGCTATAAAAATGGAGGAAGTCGGTGTTAAATTAGAACACTGTTTAATAGaaAACTACGGCGGAGGAGATATGAGAACGGTAACATCAATGAACCAACTCCAACATACATCGACTCCTAGTTATTCTTATACATCACAATCTCATCAACGATTGAGTCCCACTTACGCATCTCAAACGTCACCGCAATTGACGACACAATCTCACTTCTACGACTCGATGCCACAACAACCCAGTCCCAGTCAGGCTTCAGACGAATCCGACAGTTCTCTCAACACCACCAACAACAACAATAACACCAAAGTCATCATCAACGGCGAACATTGTCTCGATAGACCAACCGTGGTTTCTCTAtcatcataa
- Protein Sequence
- MDLNFLQQHNPLYSRGAGTYAAGTMSYYNSSPELTTQPSQLWTNNGVNATGTLSIPEDYPKVTSSSTTLPGFSRLPTFTNNHNHHRSNTYLPNNAIYGEWPAYTTDQYGLNPTSQRNRPISAAASLSAIDPRTTEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCNTSTTSLWRRNALGEPVCNACGLYYKLHSVNRPLSMKKDSIQTRKRKPKGSKESNGNSAHIPRNLSHTPSLPAIKMEEVGVKLEHCLIENYGGGDMRTVTSMNQLQHTSTPSYSYTSQSHQRLSPTYASQTSPQLTTQSHFYDSMPQQPSPSQASDESDSSLNTTNNNNNTKVIINGEHCLDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106853;
- 90% Identity
- iTF_00911562;
- 80% Identity
- -