Ntra015016.1
Basic Information
- Insect
- Neocrepidodera transversa
- Gene Symbol
- gata5-b
- Assembly
- GCA_963243735.1
- Location
- OY725340.1:25326703-25378108[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-18 2.5e-14 54.1 2.7 1 34 146 178 146 180 0.97 2 2 2.2e-18 1.3e-14 55.0 4.9 1 35 200 233 200 234 0.97
Sequence Information
- Coding Sequence
- ATGTCCTCTATTTTAGAGCTTTTGTTGTCAACTAAtccACTATATTCAAGATCTAGTGCTTATAACACGGGCGCGATGCCTTATTTTAATAGTGGATCTCCTGAACTTACCACCCAACCTTCACAGTTATGGACAAATTCAggtgtaAATACTACAGGACCGTTATCGTTAGCGGAAGATTACCCCAAAGTAAGTTCATCATCAGCAGGCAGTTTACCAGCTTTTAACAGGTTACCGACAACATTCACCAACAATCACAATCATCATCGTACAGCTGCTTACTTACCTAACGCCATCTACGGGGAATGGCCGACATACTCGTCAGAACAATATGGCCTTAATTCGAATACGCAAAGGAATAGACCTATTTCGGCAGCGGCTTCTTTGTCAGCAATCGATCCACGCACAGCGGAATTCTTCACCGAAGGTAGGGAATGTGTTAATTGCGGAGCAATTGATACTCCGTTGTGGAGAAGAGACGGCACCGGTCACTATCTTTGCAACGCGTGTGGCCTCTACCACAAGATGAACGGCATGAACCGGCCTCTTGTCAAGCAGCCTCGCAGAttgTCAGCCTCCCGTCGAGCGGGTTTGACTTGCACCAACTGTCATACTAGTACTACATCTCTTTGGAGGAGAAACGCTTTAGGAGAACCAGTTTGCAACGCTTGTGGACTTTACTACAAATTACATTCCGTCAATAGACCTCTTTCGATGAAGAAAGATAGTATTCAGACAAGAAAACGAAAACCAAAAGGAAGTAAAGAGTCGAACGCAAGTAGTACCCACATTCCAAGGAATCTCACCAATACATCACTTTCCTCAATTAAAATGGAAGACGTTAAATTAGAACATACAAGTTTAGATAATTATAGCGATCTTAGAACTGTAACATCTCTGAATCAACTTCAACATGCCACGTCGACGAGTTACGCTTACACTACTCAAGCACATCAAAGATTAAGTCCAACATATCCATCTCAATCGCCTCAACTTAGCACGCAGTCTCATTACTACGAGTCGATTCTTCAACAGCCAAGTCCCAGTCCAAATTCTAACGAGTCGGATTCTGAAACTGCTCCtcttcttaataataataacaataataataatactaaagtTATTATTAATGGTGATCATTGCGTTGATAGACCTACCGTGGTATCGCTTTCTTCGTAA
- Protein Sequence
- MSSILELLLSTNPLYSRSSAYNTGAMPYFNSGSPELTTQPSQLWTNSGVNTTGPLSLAEDYPKVSSSSAGSLPAFNRLPTTFTNNHNHHRTAAYLPNAIYGEWPTYSSEQYGLNSNTQRNRPISAAASLSAIDPRTAEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCHTSTTSLWRRNALGEPVCNACGLYYKLHSVNRPLSMKKDSIQTRKRKPKGSKESNASSTHIPRNLTNTSLSSIKMEDVKLEHTSLDNYSDLRTVTSLNQLQHATSTSYAYTTQAHQRLSPTYPSQSPQLSTQSHYYESILQQPSPSPNSNESDSETAPLLNNNNNNNNTKVIINGDHCVDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106853;
- 90% Identity
- -
- 80% Identity
- -