Basic Information

Gene Symbol
znf423
Assembly
GCA_963932345.1
Location
OZ010711.1:27772204-27788869[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 8.9e-06 0.0008 19.9 1.5 1 23 81 103 81 103 0.98
2 19 0.22 19 6.1 4.9 1 23 109 131 109 131 0.98
3 19 1.2e-06 0.0001 22.7 4.1 1 23 137 159 137 159 0.99
4 19 0.00024 0.021 15.4 0.2 1 23 165 187 165 187 0.99
5 19 0.00023 0.02 15.5 0.4 1 23 349 372 349 372 0.94
6 19 0.093 8.3 7.3 0.1 2 23 383 405 382 405 0.89
7 19 0.22 20 6.1 0.1 3 23 475 495 474 495 0.97
8 19 0.00083 0.074 13.7 0.1 3 23 512 532 511 532 0.97
9 19 0.00026 0.024 15.3 0.6 1 23 541 564 541 564 0.94
10 19 2.5 2.2e+02 2.8 0.1 1 23 569 592 569 592 0.91
11 19 0.58 52 4.8 2.4 2 23 667 688 666 688 0.96
12 19 0.0012 0.11 13.2 0.0 1 23 693 716 693 716 0.95
13 19 0.54 48 4.9 0.1 2 23 787 810 786 810 0.88
14 19 4.8e-05 0.0043 17.6 1.0 2 23 826 848 825 848 0.96
15 19 0.066 5.9 7.7 1.5 1 23 857 880 857 880 0.93
16 19 0.0057 0.51 11.1 0.2 2 23 1095 1117 1094 1117 0.96
17 19 0.1 8.9 7.2 0.4 1 23 1125 1148 1125 1148 0.96
18 19 0.0083 0.74 10.6 0.2 2 23 1191 1213 1190 1213 0.94
19 19 0.045 4 8.3 1.1 1 23 1220 1243 1220 1243 0.95

Sequence Information

Coding Sequence
ATGAGGATAGGAGAAGAGGAGCACGCGCGCGAGGGAATGAACGAGGGTGGAAGAAGCATCACGGACGCTCTCGGGACCGGAAGTTCGTCATGGCACAGCGAGGATGGCGGTGCGAATTCGCGACGGGGCGGAGAAACCCCCTCGTCCTGCGCGACTCCAACATCGGCGAGTTTCCCCTCGGAACCGGAAGTCGATACCGAAGTCGGCATCAACGCCGATGGTAACAATTCCGTTGCCCCTTATCCCTGCCAATTCTGCGACAGGACTTTCCCGCGACTCAGCTACTTGAAGAAACACGAGCAGaGTCACGGCGATCAGATGCCGTACCGTTGCAGCTGGTGTTCGCGTCTCTTCAAGCACAAGCGAAGCAGGGATCGTCACGTCAAGCTGCACACCGGCGACCGAAGGTATCGGTGCTCTCACTGCGAAGCCGCGTTCTCCAGAAGTGATCACCTGAAGATTCACATGAAGACACACGACAATCAGAAGCCTTATCAGTGCACCGCTTGTTCGCGcggctacaacacagcggcagccCTAACCTCGCACATGCAATCCCACAAGAAGCACGCGAGTCCAAATCAGAACGCAAAGATGGCAGATATTGATTACGGGCGACGGAGCGTCTCGTCGCACAGTACCTCGTCACCGCCTATCCAAAATTCTCCGTCTCCGAGCTTGAATCTAACCGCAAATCTGAAGAATTCATTGAAATCACAACAATCGATTTACAGCAGTGGGAACAACGGTCCAAAAACTTCCGCCATGTTGAATTCACCGTTGAAGTTGGCCTGCATGTATTGCACGAAGGACTCGTTCACGAGTATGCACCAATTGCAGATGCACGTACACGCGATGCATCAGGCGATATTGAACGGGGCGACTTTGAACGTGGAGTCACCGGGACAGACGAATAAGCCGGAAGCGATCAGCTCAAAAGGCCACGATGCACCGTCCGTTGTGGAACGAAACAACGAACCCGAGAGAACGTATCGTCGCGAAAAGTCCGGAGAATTGGACCGGATCAGCACTTTGGAGAACGCATTCTCTTGCAGCCAGTGCACCATGAAGTTTTCCAGTCTGAGCGAGCTACGCGATCATCTGTTGGCAATTCATCGAGGAGATGGGTTCGGCTCGAGCCTGATGATGTGTCCACTGTGCGGTATTACTTGCGCCTCTGCTGCCTCTTACGCGGAACACTATGTCCTCCAACACTGCGAGAATCGTCAAGTGGCTGGCAAGGATTCGCACCATCGAGACTGGGACGTTTCGAGGATGAACGGTAGTCGGGAGAGCAGCCGAGGTGCTTCGGATGATCACGGCACAACGAGTAGATCTGATCTTGGAACATCGGAGCCGGCCGATTTGACGAAGAAGCAAGCTAGAGCCGGGGATACCGGTTACACAACTGGGACACTATTGTGCGGTCAATGCGGTGCCGCGTTGAAGGACTTTGAGTCGTTTCGCGAACATCTGGCTCGTCATCTTCAAGCCGATCAGCAGCAGAACATTGAACCTTTACCGAGGAATCCATGCCCGAAGTGCGGCACGAGTTTTCCCGAACGTGAAGACATGTTGGCTCATCTCACCAAACACTATCTTGGCCAAGTTACCAAGGAGTACACTTGTGGCGCTTGCAAAAAGTCTTATCCTCATCCGGATCTTCTGCAACGACATCTCCTCGACACCCACGCCCATCATCTCTACCGTTGCGCCGTATGCCGCGACACCTTCGACTCCAGGGTCGCCATTCAGGTTCATTTCGCGGTCAAACACAGCCAGGAGTCTCAGGTATATCGTTGCAACGTATGCAACGCCTCGGGCAATGAGAATTCCCCGGGGAATTCGCCCGGCGAGGTGAGAAATTGCTTCCGCAGCGAGGCCGAAATGGCCAATCACGTTAGATCGATTCACGCACCAACCACCAACATCGTCGACGAGGCACCTCTGCGAAGAAGTCCCGCGGTCACGCCAGCCAGCAATGCCACTAACACCAGCAGATGCGTGTTTTGCGGTCACAGCTGCAACACGGATTTGGAGCTACAGCTTCATCTGGCGAGCCATTCCGCCAATCTTTATCGATGCCCAATATGCAGAGAAGGATTCCCAGTTGAGTTTCTCTTGGAGAGGCACATAGCTCAGGCCCATCGAGCCAGCAGTGATCGGAACGACGGGAGGGAGAATGGAAGGTCCTACAGGACTTCGAGGTCGCAGGACGAAACGGCAAGGTCACAAAAGCGCGGACGATCGCCAGCCTCGAGTAACAACAATTCGCTGAATCAACGTGACAACAATAGCAAACGACCAAATTACGGGGGTGTTAGCAACGGAACCGGCACGAGCAGCTCGCGCGTGCAGCAATGCGAGCTCTGCGAGAGAGCGGAATTTACAACGGAAGCGGAACTTCAGGCGCACAAAAAGCTCGTTCATACACCGATTAAAGTACAGGCTAAGTCTCTACCGTTGCTAAGCATGACCTGCGCTTACTGCGGCGAGGTTTGTCGTTCGCGAAGCGATCTTGAGTCCCACACGAGAATTCAACACGCTTTGAACGAGCCCGGTGGACGTCACAAGTGTAACATTTGCGACGAGGTCTGTCCATCAGGCAGGACATTGGCCGAGCACAAGCTCCAGACTCATTGCAAGATTCAAGTTAGCGACACTTGTATCGTGTGTCGTGGTACACTCTCGAGCGAGGCCCAATTCATCGAGCATGTCCAGCGACACAGCTTGGAAAGTGGCGAGTCTCAGCAACGTTGTTCGGATAGCACGCTTCCTCTTTTGCCAGCGGCTTGCGTCGTTTGTCGTCAGACGCTGATGAGCGATCTTGAGTGTCGTTTACATGCGGCTCACCATTTGAGAAGTTCCAATTTATCTGGTGTGACGAATTCCAGTCCGAGCCCGAATCACCACAAGCAACAACAATTCTTTCAACAGACAAACCTGAGCTGTTGCCTTTGCCTGCGAGACTTCAGCGTCGATGATTTCGTTAGCTTGCCATCCAATAATAGTGTGAGCGCGGGTGGTGGTCCATCTTTGAGGGTCTGCAGACCTTGCTATGTCAGGCACTCACAAGGCCTGCCCATACTAAGTTCACCCTACGAACACGTGAAACAGTCCAAGAGCGAGCGAAACACTTGGTTGAACGGTAAGGATCGCGCCAACAAGGACAACTCGACGGACCGATGGGATCAGAATGAGAGATCGTATGGCGTTGACGAACGCGACAGGAGCCAAAGCGTGAACGCGAAGAGTGAGATCAACGGATCGGATGGTGGCGACAGGTGCGACGAGTGCGGTATCAAATTTGAGAATACTGACGAGGCTGAAACTCATAGGAACAAAGAACACGGCAAAGGACCAAGGAACACTTACACCTGCATACAATGTCAGATGTCTTTTCCGTCGGAGGAGAAAATTCGTCAGCACGTGAGAAAGGTTCACTTGGAATCTTCGAGCAAGACCTTGAGCGAGGCGTTTCGCTGTCACCTTTGCATATTCGAAGCCAACAGCCCGCTTCAGCTCCAGGGACACTTGATAGAGCACACTTTCGCTGGTTGCGCAGGCCTTACGTGCTACATCTGCCAGGGTCTCTTCACAACGCCCCAGGCACTTCAAAATCACATGCTGCAGCAACACGGACTTGGCGCTCGTCCCTACGACTGCAGCAACTGTGGCCTCAAGTTTTTCTTCCGTATCGAGCTGGACCATCACGAGATGATGGTACATCGCGGTAACGGCACCTCTTCACCCAACGTGGTGGATGCTGGTCGAGAAGTCGCACCGGAAAACTCCCGATTGGTTGAAGCTTCAGGCATCAAACAGCTGGACGAGGATGATCGCGAGCTTCCTGGATCGAACGCTATCACGGTGAAGGAGGAAATCGTCAGTAGCCCCGGCGACAAGGAATTCCATTTGGAAGACGGTGTTCCAGAAAATGGCGTTACCGAAACGAAAGAAGGAGAGCCACGTTTTCTCGAAGCGAAGACGGAAACTTTTGGAATAATTCGCAGCGAAGACAATATCCAATCTTGA
Protein Sequence
MRIGEEEHAREGMNEGGRSITDALGTGSSSWHSEDGGANSRRGGETPSSCATPTSASFPSEPEVDTEVGINADGNNSVAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCSRLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDNQKPYQCTACSRGYNTAAALTSHMQSHKKHASPNQNAKMADIDYGRRSVSSHSTSSPPIQNSPSPSLNLTANLKNSLKSQQSIYSSGNNGPKTSAMLNSPLKLACMYCTKDSFTSMHQLQMHVHAMHQAILNGATLNVESPGQTNKPEAISSKGHDAPSVVERNNEPERTYRREKSGELDRISTLENAFSCSQCTMKFSSLSELRDHLLAIHRGDGFGSSLMMCPLCGITCASAASYAEHYVLQHCENRQVAGKDSHHRDWDVSRMNGSRESSRGASDDHGTTSRSDLGTSEPADLTKKQARAGDTGYTTGTLLCGQCGAALKDFESFREHLARHLQADQQQNIEPLPRNPCPKCGTSFPEREDMLAHLTKHYLGQVTKEYTCGACKKSYPHPDLLQRHLLDTHAHHLYRCAVCRDTFDSRVAIQVHFAVKHSQESQVYRCNVCNASGNENSPGNSPGEVRNCFRSEAEMANHVRSIHAPTTNIVDEAPLRRSPAVTPASNATNTSRCVFCGHSCNTDLELQLHLASHSANLYRCPICREGFPVEFLLERHIAQAHRASSDRNDGRENGRSYRTSRSQDETARSQKRGRSPASSNNNSLNQRDNNSKRPNYGGVSNGTGTSSSRVQQCELCERAEFTTEAELQAHKKLVHTPIKVQAKSLPLLSMTCAYCGEVCRSRSDLESHTRIQHALNEPGGRHKCNICDEVCPSGRTLAEHKLQTHCKIQVSDTCIVCRGTLSSEAQFIEHVQRHSLESGESQQRCSDSTLPLLPAACVVCRQTLMSDLECRLHAAHHLRSSNLSGVTNSSPSPNHHKQQQFFQQTNLSCCLCLRDFSVDDFVSLPSNNSVSAGGGPSLRVCRPCYVRHSQGLPILSSPYEHVKQSKSERNTWLNGKDRANKDNSTDRWDQNERSYGVDERDRSQSVNAKSEINGSDGGDRCDECGIKFENTDEAETHRNKEHGKGPRNTYTCIQCQMSFPSEEKIRQHVRKVHLESSSKTLSEAFRCHLCIFEANSPLQLQGHLIEHTFAGCAGLTCYICQGLFTTPQALQNHMLQQHGLGARPYDCSNCGLKFFFRIELDHHEMMVHRGNGTSSPNVVDAGREVAPENSRLVEASGIKQLDEDDRELPGSNAITVKEEIVSSPGDKEFHLEDGVPENGVTETKEGEPRFLEAKTETFGIIRSEDNIQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01101554;
80% Identity
-