Olut009200.1
Basic Information
- Insect
- Ophion luteus
- Gene Symbol
- znf423
- Assembly
- GCA_944452655.1
- Location
- CALYBV010000853.1:144995-166299[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 8.7e-06 0.0011 19.9 1.5 1 23 76 98 76 98 0.98 2 20 0.21 26 6.1 4.9 1 23 104 126 104 126 0.98 3 20 1.1e-06 0.00014 22.7 4.1 1 23 132 154 132 154 0.99 4 20 0.00023 0.028 15.4 0.2 1 23 160 182 160 182 0.99 5 20 0.0004 0.049 14.7 0.3 1 23 344 367 344 367 0.94 6 20 0.27 33 5.8 0.0 2 23 378 400 377 400 0.88 7 20 0.21 26 6.1 0.1 3 23 470 490 469 490 0.97 8 20 0.088 11 7.3 0.0 3 23 507 527 506 527 0.96 9 20 0.00026 0.031 15.3 0.6 1 23 536 559 536 559 0.94 10 20 2.4 2.9e+02 2.8 0.1 1 23 564 587 564 587 0.91 11 20 8 9.8e+02 1.2 0.1 9 23 618 633 617 633 0.94 12 20 2.9 3.6e+02 2.5 4.8 2 23 662 683 661 683 0.96 13 20 0.0012 0.14 13.2 0.0 1 23 688 711 688 711 0.95 14 20 0.53 64 4.9 0.1 2 23 782 805 781 805 0.88 15 20 4.6e-05 0.0057 17.6 1.0 2 23 821 843 820 843 0.96 16 20 0.037 4.5 8.5 0.8 1 23 852 875 852 875 0.93 17 20 0.0048 0.59 11.3 0.0 2 23 1090 1112 1089 1112 0.95 18 20 0.097 12 7.2 0.4 1 23 1120 1143 1120 1143 0.96 19 20 0.011 1.4 10.2 0.6 2 23 1186 1208 1185 1208 0.94 20 20 0.0077 0.94 10.7 1.1 1 23 1215 1238 1215 1238 0.96
Sequence Information
- Coding Sequence
- ATGATGTTTTTGGATTTCTATTATTTGGCTGCTGATCTCCATTTTACAGACGCTCTCGGGACCGGAAGTTCGTCATGGCACAGCGAGGATGGCGGTGCGAATTCGCGGCGGGGCGGAGAAACTCCCTCGTCCTGCGCGACTCCAACTTCGGCCAGTTTCCCCTCGGAACCGGAAGTCGATACCGAGGTCGGGATCAACGCCGATGGCAGCACTCCCGTTGCCCCTTATCCCTGCCAATTCTGCGACAGGACCTTCCCGCGACTCAGCTACTTGAAGAAACACGAGCAGAGTCACGGCGATCAGATGCCGTACCGTTGCAGCTGGTGTTCGCGTCTCTTCAAGCACAAGCGAAGCAGGGATCGTCACGTCAAGTTGCACACCGGCGACCGAAGGTATCGGTGCTCCCATTGCGAGGCCGCCTTCTCCAGAAGTGACCACCTGAAGATTCACATGAAGACACACGACAATCAGAAGCCTTATCAGTGCACCGCTTGTTCGCGCGGCTACAACACAGCGGCCGCCTTAACCTCGCACATGCAATCGCACAAGAAGCACGCGAGTCCGAATCAGAACGCGAAGATAGCGGACATTGATTACGGGCGACGAAGCGTGTCGTCGCACAGTACCTCGTCACCGCCGATCCAAAATTCTCCCTCTCCGAGCTTGAATCTTAGCGCAATTCCGAAGAATTCCCTGAAATCGCATCAATCGATGTACAGCAGCGGGAACAACGGTCCGAAAACTCCCACCATGCTGAATTCACCGTTGAAGTTGGCCTGCATGTATTGCACGAAGGACTCGTTCACGAGTATGCACCAATTGCAGATGCACGTACACGCGATGCATCAAGCGATATTGAACGGGGCGACCTTGAACGTGGAGTCGCCGGGGCAGGCGAATAAGCCGGAAGCGATCAGCTCCATAGGCCGCGATGGGCCCTCCGTTGCGGAAAGAAACAACGAACCCGAGAGAACGTACCGTCGCGATAAGTCCGTGGAACTGGACCGGATGAACACTCTGGAGAACGCATTCTCTTGCGGGCAGTGCACCATGAAGTTTTCCAGTCTGAGCGAGCTGCGGGATCATCTGTTGGCGATTCATCGAGGCGATGGGTTCGGCTCGAGCCTGATGATGTGTCCACTTTGCGGTATTCCTTGCGCCTCTGCAGCATCCTACGCGGAACATTATGTCCTCCAGCACTGCGAGAATCGTCAGGTGGCTGGCAAGGATTCGCACCATCGAGACTGGGACGTTTCGAGGATGAACGGTAGCCGCGAGAGCAGCCGGGCTGCCTCGGAGGATCAGGGCACGACGAGCAGATCTGACATTGGAACGTCGGAGCCTGCCGATCTGACGAAGAAACAGGCGAGACCCGGAGATACCGGTTACACAACCGGGACCCTTCTGTGCGGTCAGTGCGGTGCCGCGTTGAAGGACTTCGAGTCCTTTCGCGAACATCTGGCCCGTCATCTTCAAGCCGATCAGCAGCAGAACAGCGAAACGTTGCCGAGGAATCCCTGCCCCAAGTGCGCCGCGAGTTTTCCCGAACGCGAGGACATGTTGGCTCATCTCACCAAACACTATCTCGGCCAAGTCACCAAGGAGTACACTTGCGGCGCTTGCAAAAAGTCTTATCCACATCCGGATCTTTTGCAACGTCATCTACTCGACACCCACGCCCATCATTTGTACCGTTGCGCCGTCTGCCGCGACACCTTCGACTCCAGAGTCGCCATTCAGGTGCACTTCGCGGTCAAACACAGCCAGGAGTCGCAGATCTATCGTTGCAACGCGTGCAACACCTCGGGCAACGAGAATTCCCCGGGGAATTCGCCTGGCGAGGTGAGAAATTGCTTTCGCACCGAGGCCGAAATGGCCAATCACGTTAGATCGATTCACGCACCATCCGCGAATGTCAGCGAGGAGGCTCCTTTGCGGAGAAGTCCCGCGGTCACGCCAGCCGGCAACGCCGCTAATACCAGCAGATGCGTCTTTTGCGGCCACTGCTGCAACACGGACTTGGAGCTGCAACTTCATCTGGCGAGCCACTCGGCCAATCTCTATCGATGCCCGATCTGCAGGGAAGGATTTCCAGTGGAGTTCCTCTTGGAGAGGCACATAGCTCAGGCGCATCGAGCCAGCAGTGATCGGAACGACGGGAGGGAAAATGGAAGGTCCTACAGGGCGTCAAGGTCGCAGGACGAAACGGCAAGGTCACAAAAGCGCGGACGATCGCCAGCCTCGAGCAACAACAATTCGCTGAATCAGCGGGACAACAATAACAAACGACCGAACTACGGGGCTGTCAGCAACGGAACCGGCACAAGCAGCTCTCTCGTGCAACAATGCGAGCTCTGCGAAAGAGCGGAGTTCACAACGGAAGCGGAACTTCAGGCGCACAAAAAGCTCGTTCACACCCCGATCAAGGTACAGGCTAAGTCTCTACCGTTGCTCAGTATGACCTGCGCTTATTGCGGCGAGGTTTGTCGTTCGCGAAGCGATCTTGAGTCCCACACGAGAATTCAACACGCCTCAAACGAGCCCGGTGGACGTCACAAGTGTAACATTTGCGACGAGGTATGTCCATCAGGCGGGACATTGGCCGAGCACAAGCTCCAGACTCACTGCAAGATTCAAGTGAGCGACACTTGTATCGTGTGTCGTGGCACTCTGTCGAGCGAGGCCCAATTCGTGGAGCATGTGCAGCGACACAGCTTGGAGAGTGGCGAGTCTCATCAACGTTGTTCGGACAGCACGCTTCCTCTTTTGCCTGCGGCTTGCGTCGTTTGTCGTCAGACGCTCATAAGCGATCTTGAGTGTCGTTTGCACGCGGCTCACCATTTGAGGATTTCCAATGTACCTGGAGTGACGAATGCCAGCCCAAGCCCGAATCACCACAAGCAACAACAACAACAACTCTTCCAACAGACCAATCTGAGCTGCTGTCTTTGCCTGCGAGACTTCAGCGTCGATGATTTCGTAAGCTTGCCGTCGAATAATCCAACGGGCGCGGGTGGTGGCCCACCTTTGAGGGTCTGCAGACCCTGCTACGTCAGGCACTCCCAAGGCCTGCCCATACTCAGTTCACCCTACGAACACGTGAGACAGTCCAAGAGCGAACGAAACACTTGGTCGAATGGTAAGGATCGCGCCAACAGGGACAACTCGAGGGACCAATGGGATCAGAACGAGAGATCGTATGGCGCTGACGAACGCGACAGGAGCCAAAGCGCGAAGACCGGGATTAACGGATCGGATGGTGGCGACAGGTGCGACGAGTGCGGTATCAAGTTTGAGAATCCTGGCGAGGCTGAAACTCATAGGATCAAGGAACACGGCAAAGGAACAAGGAACACTTACACCTGCATACAATGTCAGATGTCTTTTCCATCGGAGGAGAAAATTCGTCAGCACGTGAGGAAGGTCCATTTGGAATCCTCGAGCAAGTCCTTGAGCGAGGCGTTGCGCTGTCACCTTTGCATATTCGAAGCCAATAGTCCTCTCCAGCTCCAGGGACACTTGATAGAGCACACTTTCGCCGGTTGCGCTGGCCTAACCTGCTACATCTGTCAGGGTCTCTTCACGACACCCCAGGCACTTCAGAATCACATGCTGCACCTACACGGACTTGGCGCCCGCCCCTACGACTGCAGCAACTGCGGCCTCAAGTTTTTCTTCCGTATCGAGCTTGAACATCACGAGATGATGGTGCATCGCGGTAACGACCCCTCGTCACCCAAAATGGCGCACGCGGCTCGAGAACTCACACCGGGAAATCGCGAAATGGCCGAAGATTCAGGCATCCAACAGCTGGATGAGGACAATCGAGAGCTGCCTGCATCGAACGCTGTCACGGTGAAGGAAGAAATCGTCGGCAGTCCCAGCGACAAGGAATTCCAGCTGGACGATGATGTCCCGGAAAATGGCGATTCGGAAACGAAAGAAGAAGAGCCACATTTTCTCGAAGCGAAGACGGAATCTTTTGGAATAACGCACAGCGAAGACAACGTACAATCTTGA
- Protein Sequence
- MMFLDFYYLAADLHFTDALGTGSSSWHSEDGGANSRRGGETPSSCATPTSASFPSEPEVDTEVGINADGSTPVAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCSRLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDNQKPYQCTACSRGYNTAAALTSHMQSHKKHASPNQNAKIADIDYGRRSVSSHSTSSPPIQNSPSPSLNLSAIPKNSLKSHQSMYSSGNNGPKTPTMLNSPLKLACMYCTKDSFTSMHQLQMHVHAMHQAILNGATLNVESPGQANKPEAISSIGRDGPSVAERNNEPERTYRRDKSVELDRMNTLENAFSCGQCTMKFSSLSELRDHLLAIHRGDGFGSSLMMCPLCGIPCASAASYAEHYVLQHCENRQVAGKDSHHRDWDVSRMNGSRESSRAASEDQGTTSRSDIGTSEPADLTKKQARPGDTGYTTGTLLCGQCGAALKDFESFREHLARHLQADQQQNSETLPRNPCPKCAASFPEREDMLAHLTKHYLGQVTKEYTCGACKKSYPHPDLLQRHLLDTHAHHLYRCAVCRDTFDSRVAIQVHFAVKHSQESQIYRCNACNTSGNENSPGNSPGEVRNCFRTEAEMANHVRSIHAPSANVSEEAPLRRSPAVTPAGNAANTSRCVFCGHCCNTDLELQLHLASHSANLYRCPICREGFPVEFLLERHIAQAHRASSDRNDGRENGRSYRASRSQDETARSQKRGRSPASSNNNSLNQRDNNNKRPNYGAVSNGTGTSSSLVQQCELCERAEFTTEAELQAHKKLVHTPIKVQAKSLPLLSMTCAYCGEVCRSRSDLESHTRIQHASNEPGGRHKCNICDEVCPSGGTLAEHKLQTHCKIQVSDTCIVCRGTLSSEAQFVEHVQRHSLESGESHQRCSDSTLPLLPAACVVCRQTLISDLECRLHAAHHLRISNVPGVTNASPSPNHHKQQQQQLFQQTNLSCCLCLRDFSVDDFVSLPSNNPTGAGGGPPLRVCRPCYVRHSQGLPILSSPYEHVRQSKSERNTWSNGKDRANRDNSRDQWDQNERSYGADERDRSQSAKTGINGSDGGDRCDECGIKFENPGEAETHRIKEHGKGTRNTYTCIQCQMSFPSEEKIRQHVRKVHLESSSKSLSEALRCHLCIFEANSPLQLQGHLIEHTFAGCAGLTCYICQGLFTTPQALQNHMLHLHGLGARPYDCSNCGLKFFFRIELEHHEMMVHRGNDPSSPKMAHAARELTPGNREMAEDSGIQQLDEDNRELPASNAVTVKEEIVGSPSDKEFQLDDDVPENGDSETKEEEPHFLEAKTESFGITHSEDNVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01101554;
- 90% Identity
- iTF_01103749;
- 80% Identity
- -