Ofas003221.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oligia fasciuncula
Gene Symbol
Gcfc2
Assembly
GCA_963082905.1
Location
OY720388.1:4582576-4603347[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-15 5.7e-11 43.5 0.0 3 190 196 363 194 372 0.73

Sequence Information

Coding Sequence
ATGTCGAAAGGTGTAAAATACGACTCAGGAGAGCTCCAAGTAGAACGCGAATCGACATCAGAAACCCAAAAGGACCTTCGCGAGAGGTTGCTTACTTCGGCCAGAATACGCGAGAGTCGGGCGTCGCGCTGTGGGGAGTTAGACGCCGCGTATAGAAGGGCACAAGCCATACGCGGATACCTTACAGACCTTATCGAGTGCCTTGAtgagaaaATGCCGCAACTGGAGGCGTTAGAAGCTCGCGCGCTGGCGCTACATAAGCGGCGCTGTGAGTTCTTAGTTGAAAGGCGACGGGCCGACCTGCGGGATCAGGCGCAAGATGTACTCGCCCCACCCGGTCGAGCCTCGAAGCCAGCTGACAACGAAGAGAAGACGCGTCGCGCCGCCGAGCGCGAGGgacggcggcgcgcgcgcaggctGCGGCGCGAGGCGGGCGCGGCCGCGCGCGCGCACCGGGACGGGGACTCCTCGGACGACGACCTGCCGCCGCATGAGCTGCACCACTACACACAGGAGAGAGATACAATCCGTCAACAATCAGCAACGTTGTTCAGTGACGCTTTGCCGGCGTGGCGAAGTGTGTCAGGCGTGTGCAGGCGCTTAGCGCGCTGGCGAGCTCGCGCTCCGTCGCTGTATACGGATGCTTATGTCGCGGACTGTCTGCCCAAGCTACTGGCGCCCTATGTCAGGCATGAGCTAATTCTATGGAACCCGCTGGCAGATGAAGACAATGAAGACTACGAGAGAATGGATTGGTACAAATGCCTGATGATGTACGGCGTCCGTACTGAACGTGGTGCTGACGACTCCTCCGAATCTGCATCAGAAGGCGAAGTGGAGCCTCTCCCTGTGACGGACAGCACGGTGCGAGAGGACCCCGACCTGCTGCTGGTACCGAGCGTCGTCGGCAGGGTGGTGCTGCCTTGTCTCACAGagctagtatcagtagCGTGGGACCCAATGAGCGTGCGTTCGTGCATACGTCTGCGTTCGCTACTACTGCGGGCCGCGGGTCTGCCCACATGTTCCAACGCGTTGCGTCGCCTGTCGGCTGCCTTACGAGCAAGGTTGGCTGTGGCGCTTGGAGCTGATGTGTTCCTGCCCGCGTTGCCTCCACAAGTGCTggagggcgcgggcggcgcgttCTGGCGGCgctgcgcgggcgcgggcgtgCGCCTGCTGCGCGCGACGCTGGCGCTGGCCGGCCCGCCCGCGCTGCTGTGTGCCGACCCGCTCGTACTGTCGCTTATTGAGACGTTAtgctgcggcgcgggcgcagcaaGCGGGCCGTACGTAGCGAGCGCGGCGTCAGCGCTCACCGACACGCTGCCGCGCACTGGAGCGTTACGTAAGCGCGCGCTCGCACGACTGGCTGCGCTCGCTACTTTAGCACTGTCGAGGCTTGATAGTGACAACCCGCTGCATCTaaaaGCCCTGGAGCAAGCACGGGCAGTGATCGCAGAAGCTCGAGCGGTTGAATGA
Protein Sequence
MSKGVKYDSGELQVERESTSETQKDLRERLLTSARIRESRASRCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLVERRRADLRDQAQDVLAPPGRASKPADNEEKTRRAAEREGRRRARRLRREAGAAARAHRDGDSSDDDLPPHELHHYTQERDTIRQQSATLFSDALPAWRSVSGVCRRLARWRARAPSLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTERGADDSSESASEGEVEPLPVTDSTVREDPDLLLVPSVVGRVVLPCLTELVSVAWDPMSVRSCIRLRSLLLRAAGLPTCSNALRRLSAALRARLAVALGADVFLPALPPQVLEGAGGAFWRRCAGAGVRLLRATLALAGPPALLCADPLVLSLIETLCCGAGAASGPYVASAASALTDTLPRTGALRKRALARLAALATLALSRLDSDNPLHLKALEQARAVIAEARAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00758187; iTF_00745717; iTF_00924702; iTF_00172974; iTF_01441114; iTF_00785223; iTF_00783501; iTF_00810088; iTF_00809159; iTF_00122417;
90% Identity
iTF_00038793;
80% Identity
-