Hamb008313.1
Basic Information
- Insect
- Hoplodrina ambigua
- Gene Symbol
- ILP1
- Assembly
- GCA_949774945.1
- Location
- OX458968.1:13247221-13253126[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.66 9.1e+03 -3.5 0.0 221 236 9 24 4 54 0.55 2 2 3.2e-13 4.4e-09 37.0 0.2 5 189 212 376 208 386 0.65
Sequence Information
- Coding Sequence
- ATGTTCAGTCAACTGGTAAATTATATACTGGCTGTTCTGAGGACACTGTTACAAGAACTGCAAGTGGAACGCGATGCGACATCAGAAACACAGAGGGACCTTCGCGAGCGGTTGCTCTCCGCGGCCAGAATACGAGAGAGCCGGGCGTCGCGCTGTGCGGAGCTGGACGCCGCGTATAGGAGGGCGCAGGCCATACGCGGGTACCTCACCGACCTTATCGAGTGTCTTGATGAGAAAATGCCGCAACTGGAGGCGTTAGAATCCCGCGCCTTAGCGTTACACAAGCGTCGCTGTGACTTCCTCATAGAAAGACGACGAGCCGACCTGCGGGATCAGGCGCAAGATGTACTCGCACCGCCCGGTCGAGCTGCCTCAAAGTCAGCTGACAGCGAAGAGAAGACACGTCGCGCTGCTGAGCGTGAGGGACGGAGACGCGCGCGCCGCCTGCGTCGCGAGGCCGCGGCCGCTGCCGCCGGCGGGGTTGCGCACGCGCACCGCGAAGGAGATTCCTCCGACGATGACCTGCCGCCGCACGAGCAGCATCACTACACGCAGGAGAGAGACGCCATCCGCGCGCAGTCGGCGTCGCTGTTCAGCGACGCGCTGGCGGCGTGGCGCAGCGCGTGGGGCGTGTGCGCGCGCCTGGCCCGCtggcgcgcgcgcgccgcccgcctgTACGCCGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTCGCGCCCTACGTGCGCCACGAGCTAATACTATGGAATCCGCTGGCAGATGAAGACAATGAAGACTACGAGAGAATGGATTGGTACAAATGCCTGATGATGTACGGCGTCCGCACGGAACGCTCTGCAGACGACTCTTCAGAGTCGGCCTCCGATGGCGAGGTGGAGCCCCTGCCGGTGACGGAGCACACCGTGCGCGAGGACCCTGACCTGCTGCTGGTGCCTACCATCATCAGCAGGGTGGTGCTGCCATGCCTGACAGAGCTGGTAACGGTGGCGTGGGACCCGATGAGCGTGCGGTCGTGCATCCGCCTGCGCTCGCTGGTGCTGCGCGCGGCCTCCACGCCCACGTGCGCGCCGGCCCTGGCGCGCCTGGCCGCCGCCATGCGGGGCCGCCTTGCCGCCGCGCTTGGGGCCGACGTGTTTCTGCCCGCGCTGCCGCCGCAagTGCTGGAGGGCGCGGGCGCGACGTTGTGGCGACGCTGCCTGGGCGCGGGCGTGCGTCTGCTGCGCGCGGCGCTCGCGCTGTGCGCGCCGCCTGCACTGCTGCACGCTGACGCGCTCGTGCTGTCTCTCATTGACACGCTGTgctgcggcgcgggcgcggcgagCGGGCCGCACGTGGCGCGCGCGGCGTGTGCCCTGAGCGCCAGCCTGCCGCGCGCGGGGGCGCTGCGCGCGCGCGCGCTCGTGCGCCTGGCCGCGCTGGCCACGCTCGCGCTCTCGCGCCTCCACAGCGACAACCCGCTGCATCTAAAAGCACTGGAACAGGCGAGAGCGGTGATCGCAGAGGCGCGGGCGGCTGAATGA
- Protein Sequence
- MFSQLVNYILAVLRTLLQELQVERDATSETQRDLRERLLSAARIRESRASRCAELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALESRALALHKRRCDFLIERRRADLRDQAQDVLAPPGRAASKSADSEEKTRRAAEREGRRRARRLRREAAAAAAGGVAHAHREGDSSDDDLPPHEQHHYTQERDAIRAQSASLFSDALAAWRSAWGVCARLARWRARAARLYADAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTERSADDSSESASDGEVEPLPVTEHTVREDPDLLLVPTIISRVVLPCLTELVTVAWDPMSVRSCIRLRSLVLRAASTPTCAPALARLAAAMRGRLAAALGADVFLPALPPQVLEGAGATLWRRCLGAGVRLLRAALALCAPPALLHADALVLSLIDTLCCGAGAASGPHVARAACALSASLPRAGALRARALVRLAALATLALSRLHSDNPLHLKALEQARAVIAEARAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01093117;
- 90% Identity
- iTF_00810088;
- 80% Identity
- -