Basic Information

Insect: Agrochola lychnidis
Gene Symbol: Gcfc2
Assembly: GCA_963680765.1
Location: OY796850.1:23500820-23513364[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-15 7.1e-11 43.6 0.0 3 190 205 372 203 383 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-15	7.1e-11	43.6	0.0	3	190	205	372	203	383	0.75

Sequence Information

Coding Sequence: atggagtttagaTTATTTCAAATGTTCCTCATCCACAGGTTAGGAGAGCTCCAAGTAGAACGTGAGTTGACATCAGAAACACAAAAAGATCTCCGCGAGAGGTTGCTCACTTCGGCCAGAATACGGGAAAGTCGAGCCTCGCGCTGTGGGGAATTAGACGCTGCGTATAGAAGGGCGCAGGCCATACGCGGGTATCTCACAGACCTTATCGAGTGCCTTGATGAAAAAATGCCACAACTGGAGGCGTTAGAAGCTCGAGCGTTGGCGTTACATAAGCGTCGCTGTGAGTTCCTCGTAGAAAGGCGACGAGCCGACCTGAGGGACCAAGCGCAAGATGTACTCGCACCTCCTGGTCGAGCGTCAAAGCCAGCTGATAACGAAGAGAAGACTCGTCGTGCGGCCGAGCGCGAGGGCCGGCGTCGTGCGCGGCGCCTCAAGCGGGAGGCCGcggccgccgccgccggcgccACCCTGCCGCACAGGGACGGCGACTCCGAGGACGACGAGCTGCCGCCGCATGAGATGCACCATTATACTCAGGAGAGAGACGCAATCCGCCAACTGTCAGCATCGTTGTTCAGTGACGCGCTGCCGGCGTGGCGCAGCGTGTCGGGCGTGTGCGCGCGCCTGGCGCGCTGGCGAGCGCGCGCCACGTCGCTGTATACGGACGCCTACGTCGCGGACTGTCTGCCCAAGCTACTGGCGCCCTATGTCAGGCATGAGCTAATTCTATGGAACCCGTTAGCAGATGAAGACAATGAGGACTACGAGAGAATGGATTGGTACAAATGTCTGATGATGTACGGCGTCCGTACTGAACGTGGTGCTGACGACTCCTCAGAATCTGCGTCCGAAGGCGAAGTAGAGACTCTTCCCGTGACGGACAGTACGGTGCGAGAGGACCCTGACTTGCTGCTGGTGCCCAGCATCATCAGCAGGGTGGTGCTTCCTTGTCTGACAGAGCTGGTATCAGTAGCGTGGGACCCAGTGAGCGTGCGCTCGTGCATACGCCTGCGCTCGCTACTGATCCGGGCGGCGGGCCTGCCCACGTGTTCCAACGCGCTGCGTCGCCTGTCGGCTGCGTTACGAGCAAGGTTGGCTGTGGCGCTTGGAGCTGATGTGTTCCTGCCTGCGTTGCCTCCACAGGTGATGGAAGGTGTAGGCGGTGCGTTCTGGCGTCGTTGCTTAGGCGCCGGTGTGCGACTCCTACGCGCTACCCTCGCGCTCACCGGCCCGCCCGCACTGTTGTATGCTGACCCGCTCGTAGTGTCGCTTATAGAGACGCTATgctgcggcgcgggcgcggccggCGGCCCGTACATAGCCAGCGCGGCCTCCGCGCTCACCGACACGCTCCCCCGCGCGGGTGCGTTACGGAAGCGCGCCCTCTCGCGCCTGGCCGCGCTGGCTACTTTAGCGCTGTCGAGGCTTGATAGTGACAACCCGCTGCATCTAAAAGCCTTGGAACAAGCAAGAGCAGTGATCGCAGAAGCTCGAGCTGTTGAATGA
Protein Sequence: MEFRLFQMFLIHRLGELQVERELTSETQKDLRERLLTSARIRESRASRCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLVERRRADLRDQAQDVLAPPGRASKPADNEEKTRRAAEREGRRRARRLKREAAAAAAGATLPHRDGDSEDDELPPHEMHHYTQERDAIRQLSASLFSDALPAWRSVSGVCARLARWRARATSLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTERGADDSSESASEGEVETLPVTDSTVREDPDLLLVPSIISRVVLPCLTELVSVAWDPVSVRSCIRLRSLLIRAAGLPTCSNALRRLSAALRARLAVALGADVFLPALPPQVMEGVGGAFWRRCLGAGVRLLRATLALTGPPALLYADPLVVSLIETLCCGAGAAGGPYIASAASALTDTLPRAGALRKRALSRLAALATLALSRLDSDNPLHLKALEQARAVIAEARAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00124291;
90% Identity: iTF_00364046; iTF_00449126; iTF_00375241; iTF_00758187; iTF_00172974; iTF_01093117; iTF_00745717; iTF_00924702; iTF_00122417; iTF_00124291; iTF_00121462; iTF_00446162; iTF_00445197; iTF_01441114;
80% Identity: -