Oiva019214.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000013.1:56374-58188[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-07 3.6e-05 24.8 0.0 5 33 22 50 18 57 0.84
Sequence Information
- Coding Sequence
- ATGCcaagaaattataaaaaacgtataggGTCgagaaattataaaaattacagCTCCGAAACTCTAAGACAATGTTTGGCTTCCATAGAAAATAAAGAAATGACGCAGAGAAAAGCCAGTGAAAAGTATGGCATCCCACGCAGAACGATTATTAATCAGCTAAGACTCCTACGATCTAAACTGCCATCTCGACCTCCAGGCGCACCAACAACATTTTCAACTGAAGAAGAAGCCTTATTTGTTGACTGCATTTTAAGGCTGAGCGAGTATGGCTTTCCTCTCACAATTTTCGATCTTCGCATCGTTATTAGAACATATTTGGAGAAAATTGGTCGGAGAGtttcaaaatttaaagataattgTCCAGGAACTGAGTGGGTGTCAAGTTTCCTAAAAAGACATTCATGTTTATCACAAAGATTTGCGACCAACATTAAACGCAGCAGAGCAGCCATTGACAAGGAAACCATCACTGCCTATATAGAAAACTTGAAAGAGGTGGTTAGAGACATACCACCCGAAAATTTATGGAATTTTGATGAGACTAATTTATCCGACGACCCTGGTCAAAAAAAAGTAATAGCGAAGCGTGGCGCAAAATACCCCGAACTTATAAGTAATACCTCCAAAAGCTCAACTTCTATCATGTTTTGTGGTAATGCTAAGGGAGAATTATTACCGCCGTATATTGTCTATAAATCTAAGCAATTATGGAGTACATGGACGGAACAAGGGCCAAAAGATGCCAGATATAATAATAGCCCATCAGGTTGGTTTGATATGAAGATATTTAACGATTGGTTTTGTACACAAATTTTGCCAATATTAAAGAaacaagagggtccgaaagttATAATAGGAGACAATTTGTCATCTCACATTTCTGTAGACGTCCTAAATGCCTGTGACAAAAATAAcataagatttgtttgtttgccaCCTAATAGCACTCACCTAACTCAGCCGTTAGATGTTGCCTTTTTCCACCCAATGAAGGTAGCATGGAGAAAAATCCTGACCGAGTGGAAGGCGAGTGTTCAAGGTAGGCGAGAGCAAGTACTCCAAAAAAGCAGTTTCCCAGTTCTGTTAAACCGACTCATCGATATTTTGGATCCGACGCGGGAGGTAAACCTCGTTTCAGGTTTTCGAAAATGTGGAATTTATCCGATTGATGCCAATCCATCATTAGAGAGGTTGCCTACAACTGTTGACAAGACTGCTTTACAAGACTCTTTTCTACAGAGTCTTGAAGCTAAGAGGCTAGAATGGACGACAAATGGAACTACAAGAGGACGTCGCAGGAAACTACACATCACTCTTGGAAAAAGTGTAACTGAGGAATTAAGCACACTTTTGGATGATAAAGAAAATGAAGAGTTGGCTCAGCCGTCAACTTCAAAGCAACCATGTCGCCGAAGAGCCAGTAGCGAAAGCTCTTACGCAGAAAGTATCGACATGTCAGTTCATGATTCTTCTGATCTTGGTTCTCTTGGAGATTTAGAAAATCTTGAAGCTAACACTGATACAGCGGCCGAAACTTGCAATTTCAAACCAATTGTGAAGGCGGTTGGGCAATATGTAGTTTTCACGTACGAGGGGGAAATGTTTCCTggtaaaattacaaaaataactaAAGAAGGGCCGTATATCTCTTCAATGAAGAGGTCTCTAAAATCCTGGACGTGGCCTAAACCCGTCGATGAAATTCAATACAATTGGCAGGATGTATTGGGATGTATTGAAGTCCCTAAAAAAATTAGTACCCACCGTGAAATATATTCCGTTCCTGAACTAGACCAAACTTGGGGTTTTTAA
- Protein Sequence
- MPRNYKKRIGSRNYKNYSSETLRQCLASIENKEMTQRKASEKYGIPRRTIINQLRLLRSKLPSRPPGAPTTFSTEEEALFVDCILRLSEYGFPLTIFDLRIVIRTYLEKIGRRVSKFKDNCPGTEWVSSFLKRHSCLSQRFATNIKRSRAAIDKETITAYIENLKEVVRDIPPENLWNFDETNLSDDPGQKKVIAKRGAKYPELISNTSKSSTSIMFCGNAKGELLPPYIVYKSKQLWSTWTEQGPKDARYNNSPSGWFDMKIFNDWFCTQILPILKKQEGPKVIIGDNLSSHISVDVLNACDKNNIRFVCLPPNSTHLTQPLDVAFFHPMKVAWRKILTEWKASVQGRREQVLQKSSFPVLLNRLIDILDPTREVNLVSGFRKCGIYPIDANPSLERLPTTVDKTALQDSFLQSLEAKRLEWTTNGTTRGRRRKLHITLGKSVTEELSTLLDDKENEELAQPSTSKQPCRRRASSESSYAESIDMSVHDSSDLGSLGDLENLEANTDTAAETCNFKPIVKAVGQYVVFTYEGEMFPGKITKITKEGPYISSMKRSLKSWTWPKPVDEIQYNWQDVLGCIEVPKKISTHREIYSVPELDQTWGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01367822; iTF_01367818; iTF_01367823; iTF_01331430; iTF_01367816; iTF_00666475; iTF_00859396; iTF_01331431; iTF_01331432; iTF_01331433; iTF_00164298; iTF_00843466; iTF_01331434; iTF_01331435; iTF_01331436; iTF_01331437; iTF_00290638; iTF_00640247; iTF_00122332; iTF_01016598;
- 90% Identity
- iTF_00859396;
- 80% Identity
- -