Oiva033669.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000022.1:18780544-18788817[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-07 3.2e-05 25.0 0.0 1 35 16 51 16 58 0.91
Sequence Information
- Coding Sequence
- ATGAGTTCTTGGGAAGGTagtaagaaaaaagaaaagaaaacataCACAGAAGAAGATTTAAAGAAAGCATTAAGTGACATTCGTGAGAAGAAAAAATCGATAAGACAAATATGCAAAGAATATGCTATTCCCAAGACCACATTATTGGACAAAATCAGTGGGCGCAGACCAGATGGAGTTAAGAAACCGGGACCAGAACCAGCGCTAAGAGTGGATGGTGAAAAAAAGGTAGTTGAATGGCTTCTTAATATTTCCAAATGTGGATTTCCAGTGAAAAAACAGGAATTGTTGGATACTGTTCAGAAAATAATTCGTGATGGggggtttaaaaataaattcaaagatGATCGCCCCGGTCAAAAGTGGTTTGAAAAATTCTTGGCCAGAAATAAAGAAGTCTCACTTAAAAATGCGGAAGGTATTAATAAAGCTAGAGCCCAAGTCACAGAAGAGTCGATCAGATTGTGGTTTAGAGAACTTGAGGAATATTTGGACAGTATACACCAAAAAGATATTTTGAATGATccgaaaagaatttttaatggaGACGAAAGTGGATTTGCTCTTTGTCCAAAGACAGGAAAAGTTTTAGGCCCAAGAGGTTTCAAGAACTTATATCAAATAAAGCCAAGTAATGAAAAGGAAAACATAACAGTATTATTAACATTTAATGCAAATGGAGATATGTGCCCACCTTGTGTCGTATTTCCATACATTAGACCACCAAAGGCTGTAGTTGATAGTATGCCCAAAGAATGGTGCTTAGGCAGATCGGAGACAGGTTGGATGAGAGGAGAAGTATTCTTTGAATACGTGACCAACGAGTTTCACAACTGGGTGGTGGAAAATAACGTCATAAAACCAATTCTTCTGCTGGTAGATGGGCATAAGTCGCATATGTCATTAATGCTAAGTACGTTATGCGAAGAACTACAAATTATTTTGTATGCCCTGCCGCCCAACACCACCCATATTTTACAACCAGCTGACGTCAGCGTATTTGCACCATTAAAAACATATTGGAAATCTACAGTCCGCGCATTCCTATCAAAACCAGAAAATTTGAATTCTGCCGTTACAAAAACAAACTTTTGCACATTATTAAATGAATCATTACAACATCCTAACATGGCCGACAACATCAAAAATGGGTTTAAGCGATGTGGTCTTTATCCATTCGATGCAAATAGTCCTGATTACACTAAATGTGTAAGAAATACTTTGGAAAATGTACAGGCCGTTGATCAACAGTCTCAAGATATTACCCACACGGAcattaaaagttttaaaaaaattttaaaacacttgAAACCgacactaaaaaaaaataatattaacattCGAACTATTACGAGAGCAGTCAATAGTTTGAAAAATACTCTCCCTGCAGAAGTTGGCTTTGCAGAGATTTCTATCGAAACTGAATCTGAGAGGTCTCTTATGGAACTATCAATAGAACAAAATAGTACTACTTTAGAATTGGATGCAACTAAAGAAGTCACCATCTCTTCATTACACGTAGAAGACGAAAACATAAATGATGAAGCTAACTCCGATTCGACTGTGCAGGTTCAAACAGTAACAGCCGAAATACATTCTGCACCAAAACCATCCACCAATGCCGAGCCTTACACATCAAAAATCACTAGCAATAGAAATCTAACTTCTTCTAAAATTGACTATGATGAAATCACACAATATCCGGATAATTCTGAAACTCTTAATACCAACAAAAACAATTCGTTCCCTGATTTGTCTCTTTCGACGTTACACCTTTCTGGCCTTGATGTTGACTCTATCGTGTCCTTAGACGACGTTCTAATTCTACCATtagaagatattatattatcaacTCCCACTCCCACTACGTCAAGTGTTGAAAAAGAAACTCCTACTAAGGAACAAACGCCAGAACCGGCTCTGACCTCTTTGATTCATACACCAAAAAAACCCTGTGATCCATTTAAAACCCACCTGATGCTGCCTGAAATTTCTAAAGAAGCAAGAAAATCTAATAATCGAAGGACTCCAGCAGCCATATCTTCTGCTGCATGGAGAAAGTATTACGAAGATAAAGAGCAGATCAAGAACGAAAAACAGGAAGCAATACGAAAAAGAAAGTTAGAACGAATAGAGAAAAAAGAACAGGAGAGAGCTCGAAAGGTTCAAAAAACTGCTCCGAAAcgaaaaaagaagataaaagccACACAGGAAACGATAGAGTCGATAGATGAGGAATCTGAGAAAGAAAATGTACCAGCCGTGGAGCTAATGAAATGTGCTAAATGTGATGATGTATTAATTTCTGATGTAGAAGATGACGATGAGAAAAACATTGGCTGTGACAAGTGTATTAGATGTCTCATTATGGGTCATAATAATGTTATGTCCAAGGAATTTCAGCTCTTGTCCGAAGAAGAATGGTTAATGGAAGCACTCGCTAGCGTAAATAACCATCTAAACTGTTTACAGatAGAGAGACTTCATCTGGAGAGTATAAAGGCAAAAAGCAGGCCCAGCTCCAGCAAGAATATCCCAGAGACTTCACAAGTCCATGAACCAGAGGAACGGGATGCTGGGTCCATCCCAACATGTGCAGTGAACTTGATGCAGAATGCCACAGTGAAGGGTGGTGGACAGGACCAAGTTCCGATAAGACCTGATGATGAGGCCACTGAGGCCATGAGGAAGAGCTTGATCTGCTGA
- Protein Sequence
- MSSWEGSKKKEKKTYTEEDLKKALSDIREKKKSIRQICKEYAIPKTTLLDKISGRRPDGVKKPGPEPALRVDGEKKVVEWLLNISKCGFPVKKQELLDTVQKIIRDGGFKNKFKDDRPGQKWFEKFLARNKEVSLKNAEGINKARAQVTEESIRLWFRELEEYLDSIHQKDILNDPKRIFNGDESGFALCPKTGKVLGPRGFKNLYQIKPSNEKENITVLLTFNANGDMCPPCVVFPYIRPPKAVVDSMPKEWCLGRSETGWMRGEVFFEYVTNEFHNWVVENNVIKPILLLVDGHKSHMSLMLSTLCEELQIILYALPPNTTHILQPADVSVFAPLKTYWKSTVRAFLSKPENLNSAVTKTNFCTLLNESLQHPNMADNIKNGFKRCGLYPFDANSPDYTKCVRNTLENVQAVDQQSQDITHTDIKSFKKILKHLKPTLKKNNINIRTITRAVNSLKNTLPAEVGFAEISIETESERSLMELSIEQNSTTLELDATKEVTISSLHVEDENINDEANSDSTVQVQTVTAEIHSAPKPSTNAEPYTSKITSNRNLTSSKIDYDEITQYPDNSETLNTNKNNSFPDLSLSTLHLSGLDVDSIVSLDDVLILPLEDIILSTPTPTTSSVEKETPTKEQTPEPALTSLIHTPKKPCDPFKTHLMLPEISKEARKSNNRRTPAAISSAAWRKYYEDKEQIKNEKQEAIRKRKLERIEKKEQERARKVQKTAPKRKKKIKATQETIESIDEESEKENVPAVELMKCAKCDDVLISDVEDDDEKNIGCDKCIRCLIMGHNNVMSKEFQLLSEEEWLMEALASVNNHLNCLQIERLHLESIKAKSRPSSSKNIPETSQVHEPEERDAGSIPTCAVNLMQNATVKGGGQDQVPIRPDDEATEAMRKSLIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00186113; iTF_01245872; iTF_01016569; iTF_00896733; iTF_00896732; iTF_01091837; iTF_00449023; iTF_00837477; iTF_01117153; iTF_00837479; iTF_00673448; iTF_01134731; iTF_01091820; iTF_01134732; iTF_01134733; iTF_00034673; iTF_00034674; iTF_00034675; iTF_01152091; iTF_01152092; iTF_01335868; iTF_01335869; iTF_01117152;
- 90% Identity
- iTF_01091837;
- 80% Identity
- -