Oiva036994.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oeneis ivallda
Gene Symbol
-
Assembly
GCA_029955525.1
Location
JARPMR010000025.1:494531-497063[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.1e-07 8.2e-05 23.7 0.0 1 35 16 51 16 58 0.91

Sequence Information

Coding Sequence
ATGAGTTCTTGGGAAGGTagtaagaaaaaagaaaagaaaacataCACAGAAGAAGATTTAAAGAAAGCATTAAGTGACATTCGTGAGAAGAAAAAATCGATAAGACAAATATGCAAAGAATATGTTATTCCCAAGACCACATTATTGGACAAAATCAGTGGGCGCAGACCAGATGGAGTTAAGAAACCGGGACCAGAACCAGCGCTAAGAGTGGATGGTGAAAAAAAGGTAGTTGAATGGCTTCTTAATATTTCCAAATGTGGATTTCCAGTGAAAAAACAGGAATTGTTGGATACTGTTCAGAAAATAATTCGTGATGGggggtttaaaaataaattcaaagatGATCGCCCCGGTCAAAAGTGGTTTGAAAAATTCTTGGCCAGAAATAAAGAAGTCTCACTTAAAAATGCGGAAGGTATTAATAAAGCTAGAGCCCAAGTCACAGAAGAGTCGATCAGATTGTGGTTTAGAGAACTTGAGGAATATTTGGACAGTATACACCAAAAAGATATTTTGAATGATccgaaaagaatttttaatggaGACGAAAGTGGATTTGCTCTTTGTCCAAAGACAGGAAAAGTTTTAGGCCCAAGAGGTTTCAAGAACTTATATCAAATAAAGCCAAGTAATGAAAAGGAAAACATAACAGTATTATTAACATTTAATGCAAATGGAGATATGTGCCCACCTTGTGTCGTATTTCCATACATTAGACCACCAAAGGTTGTAGTTAATAGTATGCCCAAAGAATGGTGCTTAGGCAGATCGGAGACAGGTTGGATGAGAGGAGAAGTATTCTTTGAATACGTGACCAACGAGTTTCACAACTGGGTGGTGGAAAATAACGTCATAAAACCAATTCTTCTGCTGGTAGATGGGCATAAGTCGCATATGTCATTAATGCTAAGTACGTTATGCGAAGAACTACAAATTATTTTGTATGCCCTGCCGCCCAACACCACCCATATTTTACAACCAGCTGACGTCAGCGTATTTGCACCATTAAAAACATATTGGAAATCTACAGTCCGCGCATTCCTATCAAAACCAGAAAATTTGAATTCTGCCGTTACAAAAACAAACTTTTGCACATTATTAAATGAATCATTACAACATCCTAACATGGCCGACAACATCAAAAATGGGTTTAAGCGATGTGGTCTTTATCCATTCGATGCAAATAGTCCTGATTACACTAAATGTGTAAGAAATACTTTGGAAAATGTACAGGCCGTTGATCAACAGTCTCAAGATATTACCCACACGGAcattaaaaAAGTTGGCTTTGCAGAGATTTCTATCGAAACTGAATCTGAGAGGTCTCTTATGGAACTATCAATAGAACAAAATAGTACTACTTTAGAATTGGATGCAACTAAAGAAGTCACCATCTCTTCATTACACGTAGAAGACGAAAACATAAATGATGAAGCTAACTCCGATTCGACTGTGCAGGTTCAAACAGTAACAGCCGAAATACATTCTGCACCAAAACTATCCACCAATGCCGAGCCTTGCACATCAAAAATCACTAGCAATAGAAATCTAACTTCTTCTAAAATTGACTATGATGAAATCACACAATATCCGGATAATTCTGAAACTCTTAATACCAACAAAAACAATTCGTTCCCTGATTTGTCTCTTTCGACGTTACACCTTTCTGGCCTTGATGTTGACTCTATCGTGTCCTTAGACGACGTTCTAATTCTACCATtagaagatattatattatcaacTCCCACTCCCACTACGTCAAGTGTTGAAAAAGAAACTCCTACTAAGGAACAAACGCCAGAACCGGCTCTGACCTCTTTGATTCATACAGTATCAATTGTACCACCATCCTTGGTTTTACCTACAGAAAGCTCTCCTCTAGTACAACCATCTTCAGCAGCTGTTGGCGATTCAAGCCAAAAAAAACCCTGTGATCCATTTAAAACCCACCTGATGCTGCCTGAAATTTCTAAAGAAGCAAGAAAATCTAATAATCGAAGGACTCCAGCAGCCATATCTTCTGCTGCATGGAGAAAGTATTACGAAGATAAAGAGCAGATCAAGAACGAAAAACAGGAAGCAATACGAAAAAGAAAGTTAGAACGAATAGAGAAAAAAGAACAGGAGAGAGCTCGAAAGGTTCAAAAAACTGCTCCGAAAcgaaaaaagaagataaaagccACACAGGAAACGATAGAGTCGATAGATGAGGAATCTGAGAAAGAAAATGTACCAGCCGTGGAGCTAATGAAATGTGCTAAATGTGACGATGTATTAATTTCTGATGTAGAAGATGACGATGAGAAAAACATTGGCTGTGACAAGTGTATTAGATGGTATCATCTGAAATGCACGCAATTTCTAGGATTAAGTTATTCAGAAGCCAAAGATAATTCTTTTGAATGTGACttgtgtaattaa
Protein Sequence
MSSWEGSKKKEKKTYTEEDLKKALSDIREKKKSIRQICKEYVIPKTTLLDKISGRRPDGVKKPGPEPALRVDGEKKVVEWLLNISKCGFPVKKQELLDTVQKIIRDGGFKNKFKDDRPGQKWFEKFLARNKEVSLKNAEGINKARAQVTEESIRLWFRELEEYLDSIHQKDILNDPKRIFNGDESGFALCPKTGKVLGPRGFKNLYQIKPSNEKENITVLLTFNANGDMCPPCVVFPYIRPPKVVVNSMPKEWCLGRSETGWMRGEVFFEYVTNEFHNWVVENNVIKPILLLVDGHKSHMSLMLSTLCEELQIILYALPPNTTHILQPADVSVFAPLKTYWKSTVRAFLSKPENLNSAVTKTNFCTLLNESLQHPNMADNIKNGFKRCGLYPFDANSPDYTKCVRNTLENVQAVDQQSQDITHTDIKKVGFAEISIETESERSLMELSIEQNSTTLELDATKEVTISSLHVEDENINDEANSDSTVQVQTVTAEIHSAPKLSTNAEPCTSKITSNRNLTSSKIDYDEITQYPDNSETLNTNKNNSFPDLSLSTLHLSGLDVDSIVSLDDVLILPLEDIILSTPTPTTSSVEKETPTKEQTPEPALTSLIHTVSIVPPSLVLPTESSPLVQPSSAAVGDSSQKKPCDPFKTHLMLPEISKEARKSNNRRTPAAISSAAWRKYYEDKEQIKNEKQEAIRKRKLERIEKKEQERARKVQKTAPKRKKKIKATQETIESIDEESEKENVPAVELMKCAKCDDVLISDVEDDDEKNIGCDKCIRWYHLKCTQFLGLSYSEAKDNSFECDLCN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01091816;
90% Identity
iTF_01091816; iTF_01134731; iTF_00837479; iTF_01134732; iTF_01134733; iTF_01091820; iTF_01152091; iTF_01152092; iTF_01335869; iTF_00449023; iTF_01117152; iTF_01117153;
80% Identity
-