Basic Information

Insect: Idaea straminata
Gene Symbol: -
Assembly: GCA_951213275.1
Location: OX577847.1:7252900-7255392[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.4e-07 7.1e-05 23.1 0.0 1 35 16 51 16 58 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.4e-07	7.1e-05	23.1	0.0	1	35	16	51	16	58	0.91

Sequence Information

Coding Sequence: ATGAGTTCTTGGGAAGGTagtaagaaaaaagaaaagaaaacatacACAGAAGAAGATTTAAGGAAAGCATTATGTGACATTCGTGAGAAGAAAAAATCGATAAGACAAATATGCAAAGAATATGCTATTCCCAAGACCACATTACTGGACAAAATCAGTGGACGCAGACCAGATGGAGTTAAGAAACCGGGACCAGAACCAGCGCTAGGAGTGGATGGTGAGAAAAAGGTAGTTGAATGGCTTCTTAATATTTCCAAATGTGGATTTCCAGTGAAAAAACAAGAATTGTTGGATACTGTTCAGAAAATAATTCGTGATGgggggtttaaaaataaattcaaagatGATCGCCCAGGTCAAAAGTGGTTTGTTAAATTCTTGGCCAGAAATAATGAAGTCTCACTTAAAAATGCGGAAGGTATTAATAAAGCTAGAGCCCAAGTCACAGAAGAGTCGATCAGATTGTGGTTTAAAGAACTTGAAGAGTATTTAGACAGTATACACCAAAAAGATATTTTGAATGATCCGAAAAGAATTTTTAATGGAGACGAAAGTGGATTTGCTCTTTGTCCAAAGACAGGGAAAGTTTTAGGCCCAAGAGGTTTCAAGAACTTATATCAAATAAAGCCaagtaatgaaaaagaaaacttaaCGGTATTATTGACATTTAATGCGAATGGAGATATGTGCCCACCTTGTGTCGTTGTGCCCCAAGAATGGTGCTTAGGCAGATCGGAGACAGGTTGGATGAGAGGAGAAATATTCTTTGAATACGTGACCAACGAGTTTCACAACTGGGTGGTGAAAAATAACATCATGAAACCAATTCTTCTGCTGGTAGATGGGCATAAATCGCATATGTCTTTAATGCTAAGTACGTTATGCGAAGAACTGCAAATTATTTTGTATGCCCTGCCGCCCAACACCACCCATATTTTACAGCCAGCTGACGTCAGCGTCTTTGCACCAGTAAAAACATATTGGAAATCTACAGTCCGCGCATTCCTATCAAAACCAGAAAACTTGAATTCTGccgttacaaaaacaaacttttgcaCATTATTAAATGAAGCATTACAACATCCTAACATGGCCGACAACATCAAAAATGGGTTTAAGCGATGTGGTCTTTACCCATTCGATGCAAATAGTCCTGATTACACTAAATGTGTAAGAAATACTTTGGAAAATGTACAGGCCGTTAATCAACAGTCACAAGATATTACCCACTCGGACATTAAgagttttaaaaaagttttaaagcaCCTGAAACCGacactaaaagaaaaaaatattaacattcgAACTATTACGAGAGCAGTCAATAGTTTGAAAAATACTCTCCCTGCTGAAGTTGGCTTTGCAGAGATTTCTATCGAAACTGAATCTGAGAGGTCTCTTATGGAACTATCAATAGAACCAAATAGTACTATTTTAGAATTGGATGCAACTAAAGAAATCACCATTTCTTCATTACACGTAGAAGACGAAAACATAAATGATGAAGCTAACTCCGATTCGACTGTGCAGGTTCAAACAGTAACAGCTGAAATACATTCTGCACCAAAACCATCCACCAATGCCGGGCCTTGCACATCAAAAATCACCAGCAATAGAAATCTAGCTTCTTCTAAAATTGACTATGATGAAATCACACTATATCCGGATAATTCTAAAACTCTTGATACCAACAAAAACAATTCGTTCCCTGATTTGTCTCTTTCGACGTTACACCTTTCTGGCCTTGATGTTGACTCTATCGTGTCCTTAGACGACGTTCTAATTCTACCATTAGAAGATGTTATATTATCAACTCCCACTCCCACTACGTCAAGTGTTGAAAAAGAAACTCCTACTAAGGAACAAACGCCAGAACCGCCTCTGACCTCTTTGATTCATACAGTATCAATTGTATCGCCATCCTTCGTTTTACCTACAGAAAACTCTCCTCTAGTACAACCATCTTCAGCAGCTGTTGGCGATTCAAGCCAAAAAAAAACCTGTGATCCATTTAAAAACCACCTAATGCTGCCTGAAATTTCTAAAGAAGCAAGAAAACCTAATAAGCAAAGGATTCCAGCAGCCATATCTTCTGCTGCATGGAGAAAGTATTACGAAGATAAAGAGCAGATCAAGAACGAAAAACAGGAAGCAATACGAAAAAGAAAGTTAGAACGAATAGAGAAAACAGAACGGGAGAGAGCTCGAAAGATTCAAAAAACTGCTCCGAAACGAAAAAAGAAGATAAAAGTCACACAGGAAACGATAGAGTCGATAGATGTGGAATCTGAGAAAGAAAATGTACCAGCCGTGGAGCTAATGAAATGTGCTGAATGTGACGATGTATTAATTTCTGATGTAGAAGATGACGATGAGAAAAACATTGGCTGTGACAAGTGTATTAGATGGTATCATCTGAAATGCACGCGATTTCTAGGATTAAGTTATTCAGAAGCCAAAGATAAGTCTTTTGAATGTGACTTGTGTGATTAA
Protein Sequence: MSSWEGSKKKEKKTYTEEDLRKALCDIREKKKSIRQICKEYAIPKTTLLDKISGRRPDGVKKPGPEPALGVDGEKKVVEWLLNISKCGFPVKKQELLDTVQKIIRDGGFKNKFKDDRPGQKWFVKFLARNNEVSLKNAEGINKARAQVTEESIRLWFKELEEYLDSIHQKDILNDPKRIFNGDESGFALCPKTGKVLGPRGFKNLYQIKPSNEKENLTVLLTFNANGDMCPPCVVVPQEWCLGRSETGWMRGEIFFEYVTNEFHNWVVKNNIMKPILLLVDGHKSHMSLMLSTLCEELQIILYALPPNTTHILQPADVSVFAPVKTYWKSTVRAFLSKPENLNSAVTKTNFCTLLNEALQHPNMADNIKNGFKRCGLYPFDANSPDYTKCVRNTLENVQAVNQQSQDITHSDIKSFKKVLKHLKPTLKEKNINIRTITRAVNSLKNTLPAEVGFAEISIETESERSLMELSIEPNSTILELDATKEITISSLHVEDENINDEANSDSTVQVQTVTAEIHSAPKPSTNAGPCTSKITSNRNLASSKIDYDEITLYPDNSKTLDTNKNNSFPDLSLSTLHLSGLDVDSIVSLDDVLILPLEDVILSTPTPTTSSVEKETPTKEQTPEPPLTSLIHTVSIVSPSFVLPTENSPLVQPSSAAVGDSSQKKTCDPFKNHLMLPEISKEARKPNKQRIPAAISSAAWRKYYEDKEQIKNEKQEAIRKRKLERIEKTERERARKIQKTAPKRKKKIKVTQETIESIDVESEKENVPAVELMKCAECDDVLISDVEDDDEKNIGCDKCIRWYHLKCTRFLGLSYSEAKDKSFECDLCD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01091816;
90% Identity: iTF_00186113; iTF_00673448; iTF_01245872; iTF_01016569; iTF_01335868; iTF_00034673; iTF_00034674; iTF_00034675; iTF_00896733; iTF_00896732;
80% Identity: -