Oqua004102.2
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- bab1
- Assembly
- GCA_949316235.1
- Location
- OX438742.1:27128192-27139892[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-05 0.0064 17.1 0.0 20 35 4 20 1 25 0.87 2 2 8.5e-17 2.6e-14 53.6 0.0 1 43 126 169 126 171 0.95
Sequence Information
- Coding Sequence
- ATGCGATTTACTCAAGCAGCTACACACTACGGAATACCCAAAGGAACATTATATGATAATATTCTTGGAAAATCCAAAAGAATGGCGGTATTAGACGAAGCTGGTCTAATAGCTAGCGAAGAGAGGGCGGTATTAGACTTTTGTTGTGAAACAAGCGTATCACCGTATAATAGAAGAACTAAAAAGGCTTTAGTGGAAATATTAGCCTTTGTTAAAGATTTGAGACGACGCAGAGATCCTGGGTTTGGTTTTGTAGGGCTGACAGCAGACAGTTACCAGTACCAGCTGCAGTCGATGTGGCAGAAATGTTGGAGTACTAATCAGAACCTGGTCAACAACCTAAGGTTCCGAGAGCGAGGTCCGCTGAAATCATGGCGCCCAGAAACCATGGCTGAAGCCATTTTCTCGGTTTTAAAAGAGGGTCTCTCCTTGTCACAAGCGGCAAGGAAGTATGATATACCATACCCAACGTTCGTGCTGTATGCCAACCGGGTCCACAACATGCTTGGGCCTAGTGCTGATGGAGGCGCAGATTTGAGACCAAAAGGCCGCGGTCGGCCACAGCGCATCTTGTTGGGCGTGTGGCCCGATGAGCACATCCGTGGAGTTATCCGCGCTGTCGTCTTCCGGGACACCCATGCACCACATGCTACACATCACTTGAATAAGGATGATCAAATGCCTGTTTATCCACCTATTACGGATGGCATGGGTGTGCAGAACGCCTACGGGAATGTGGCGTGCGGAAACGGGCGAGAGGGTGGCGTGTCGCCAAACGTCGCGGCCGCCGCGGCCGTGGCTGCAGTCGCCCACGGTCTTCGACGGCAGATGTGCAACATGGTTGTAGCCGCACAGAGGCCAACCGATCACCCTCCGCATCTGGGATTGCCGCCCCTACCGCTCCAGTCACCGCGATTACCATCTCCTCTCTCTGCTGGCCTCGAGTCACCGCTATGTTCTCCGCCTCCACCCGGCCACGCATTGGAACCGCCGAGGCCCACCGATCCCTTCCGGCCCTTTGCGTCGCCTCGCCCGGAGACCCGATACAACGACGGAATCGCTGATGTTACGGATATGGGACCGCCAAAAACTCCAGTGCCAGTTGGCAAGAACGGCAAGGAACCGCTAGCTATGCCCGAGCCCCCTCCGGCGGAAGCTCGAGCAGAAAACATCtga
- Protein Sequence
- MRFTQAATHYGIPKGTLYDNILGKSKRMAVLDEAGLIASEERAVLDFCCETSVSPYNRRTKKALVEILAFVKDLRRRRDPGFGFVGLTADSYQYQLQSMWQKCWSTNQNLVNNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPHATHHLNKDDQMPVYPPITDGMGVQNAYGNVACGNGREGGVSPNVAAAAAVAAVAHGLRRQMCNMVVAAQRPTDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPRPTDPFRPFASPRPETRYNDGIADVTDMGPPKTPVPVGKNGKEPLAMPEPPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00858467; iTF_00744528; iTF_01217415; iTF_00403692; iTF_00933652; iTF_01178330;
- 90% Identity
- -
- 80% Identity
- -