Parg005538.1
Basic Information
- Insect
- Plebejus argus
- Gene Symbol
- bab1
- Assembly
- GCA_905404155.1
- Location
- FR989932.1:4114509-4124323[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-17 1.6e-14 53.7 0.0 1 43 99 142 99 144 0.95 2 2 8.4 6.5e+03 -2.6 2.0 6 15 234 243 230 244 0.82
Sequence Information
- Coding Sequence
- ATGCATCGGCCGACGTTAAATATCTACCACAGACAAGAGAAAAACACCCTCTACACCTCGGCGGACGCATCCGCAGATACAATCTGCCGACGCATCCGTCGATATGTAAAGGAGGCATTAGGTTTAGCGAAATTACTTGAGAACTCTCACGCCTGGCTCGGAGCTTCCACGTCCTCCATCGCAGCAGATAGCTACCAGTACCAGCTGCAATCCATGTGGCAGAAGTGCTGGAACACCAATCAGAGCCTGGTGCACAACCTGCGGTTTCGTGAACGTGGACCTCTGAAGTCCTGGAGACCGGAGACCATGGCCGAGGCCATCTTCTCCGTGCTGAAGGAGGGACTGTCCCTGTCCCAAGCTGCGAGGAAATACGACATACCCTACCCGACATTCGTGCTGTACGCCAACCGAGTCCATAACATGCTTGGGCCGAGCGCTGACGGAGGAGCAGATTTGAGGCCGAAAGGTCGCGGGCGGCCGCAGCGCATCTTGCTGGGCGTCTGGCCGGACGAGCACATTCGCGGCGTCATTCGCGCGGTCGTGTTCCGCGACTCGCACACGCCGCACACCACACACCACATCAAAGAGGAGGTGCTCCCGGTCTATCCCCCCATAACGGATGGCATGAACGTGCAGAACTCGTACGCGGTGGCGTGCGGCAACGGGCGCGAGGGCGGCGTGTCGCCGAACGCTGCGGCAGCCGCAGCTGTCGCGGCGGTGGCGCACGGCTTGCGCCGGCAGATGTGCAACATGGTGGTGGCGGCGCAGCGCCCGCCCGACCACCCGCCGCACCTGGGCCTGCCGCCGCTGCCGCTGCAGTCGCCGCGCCTCGCCTCGCCGCTCTCCGCCGGCCTCGAGTCGCCGCTCTGCTCGCCGCCGCCGCCCGGCCACGCTCTCGAGCCCCCCAAGCCCGCCGACCCCTTCCGCCCCTTCGCCTCGCCGCGACCCGACAGCCGCTACGGCGAGCGCGACAGCGCCCCCGACGTCACCGACATGGGCCCCCCTAAGACCCCCGTCTCGCTGGCCAAGAACGGCAAGGACATGACGAGCCCGGTGCCGGTGAAGATGGAGCCGCCGCCGGCGGAGGCGCGCGCCGAGAACATGTGA
- Protein Sequence
- MHRPTLNIYHRQEKNTLYTSADASADTICRRIRRYVKEALGLAKLLENSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHTPHTTHHIKEEVLPVYPPITDGMNVQNSYAVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLASPLSAGLESPLCSPPPPGHALEPPKPADPFRPFASPRPDSRYGERDSAPDVTDMGPPKTPVSLAKNGKDMTSPVPVKMEPPPAEARAENM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01090606;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -