Gale001142.2
Basic Information
- Insect
- Glaucopsyche alexis
- Gene Symbol
- bab1
- Assembly
- GCA_905404095.1
- Location
- FR990042.1:21509638-21518034[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0011 0.67 10.9 0.0 20 35 4 20 1 25 0.87 2 2 5e-17 3.1e-14 53.5 0.0 1 43 134 177 134 179 0.95
Sequence Information
- Coding Sequence
- ATGAGGTTCACTCAAGCTGCTACACATTATAGAATACCAAAAGGCACGTTATACGATAACATACTAGGGAAGTCCAAACGAATGGCCGTACTGGACGAGGCAGGCTTGAACTCTAACGAGGAACGAATAATTCTAGACTTCTGTTGCGAGACTAGTGTGTCTCCTTACAATAGACGAACCAAAAAGTCACTAGCTGAAGTTCTGACGTTTGTTGAAAAGATTCGTCGTAGTAGAGATCCAAATTTTGCGTTTATCGGACTCACCGGCTTTCGATGGTGGTGGGCTTTTTCAGATAGCTACCAGTACCAGCTGCAATCCATGTGGCAGAAATGCTGGAACACCAACCAGAGCCTGGTCCACAACCTGCGGTTCCGCGAGCGTGGACCCCTCAAGTCCTGGAGACCGGAGACCATGGCTGAGGCTATCTTCTCCGTGCTGAAAGAGGGACTATCTCTATCTCAAGCTGCAAGGAAATACGACATACCCTACCCGACTTTTGTGCTGTACGCGAACCGGGTCCATAACATGCTTGGGCCTAGTGCTGATGGAGGAGCAGATTTGAGGCCGAAAGGTCGCGGGCGGCCGCAGCGCATCTTGCTGGGCGTGTGGCCGGACGAGCACATTCGCGGCGTGATCCGCGCGGTCGTGTTCCGCGACTCACACACGCCGCACACCACGCACCACATCAAGGAGGAGGTGCTCCCTGTCTATCCCCCCATTACGGATGGCATGAACGTGCAAAACACATACGCAGTGGCGTGCGGGAACGGGCGCGAAGGTGGCGTATCGCCgaacgccgccgccgccgccgccgtggCCGCGGTGGCGCACGGCCTGCGCCGTCAGATGTGCAACATGGTGGTGGCGGCGCAGCGCCCGCCCGACCACCCGCAGCACCTGGGGCTGCCGCCGCTGCCGCTGCAATCGCCGCGCCTCGCCTCGCCGCTGTCCGCCGGGCTCGAGTCGCCGCTGTgctcgccgccgccgcccggACACGCCCTCGAGCCTCCCAAGCCCACCGACCCCTTCCGCCCCTTCGCCTCGCCGCGCCCCGACAGCCGCTACGGCGAGCGCGACGGCGGGGCCGACATCACGGACATGGGCCCCCCTAAGACCCCGGTCGCGCTGGCCAAGAACGGCAAGGACGTGTCGAGCCCGGTGCCGGTGAAGATGGAGCCGCCGCCGGCGGAGGCGCGCGCCGAGAACATGTGA
- Protein Sequence
- MRFTQAATHYRIPKGTLYDNILGKSKRMAVLDEAGLNSNEERIILDFCCETSVSPYNRRTKKSLAEVLTFVEKIRRSRDPNFAFIGLTGFRWWWAFSDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHTPHTTHHIKEEVLPVYPPITDGMNVQNTYAVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPQHLGLPPLPLQSPRLASPLSAGLESPLCSPPPPGHALEPPKPTDPFRPFASPRPDSRYGERDGGADITDMGPPKTPVALAKNGKDVSSPVPVKMEPPPAEARAENM*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01090606;
- 90% Identity
- -
- 80% Identity
- -