Ospi001263.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000006.1:8170371-8173153[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-114 1.2e-109 366.0 29.9 1 300 29 325 29 325 0.98 2 2 0.013 2e+02 0.8 4.9 122 172 325 375 323 396 0.78
Sequence Information
- Coding Sequence
- ATGGAGTCTACTGTGACTGGACGAAGACGGACTGCTACTCGGCATTCTGCTGAGGACCAAGCTCTTGACCAAATAGCTAAAGAGGCAGAAGCTCGACTAGCCGCGAGGAGACAAGCACGAGCCGAAGCTAGAGAAATTCGAATGCGAGAATTGGAAAGGCAacaaaaagaagcagaagaaaatgCTGATAGAGTTTATGACATGTGTTCAGaTCCTAACAGAACCATGAGAGTAACTCCAGATCCTGTGAGAACATCGCGTTTACTCacaaattcaaataattttcaatccAGCTGTAAATCATCGGAAGATTCATTAGAAGATGTGGGACTTGGTAGAGACCTTAGGTTAGAGTTAAAGGAATTTGAAGAAAAGTTCAGAAAAGCAATGATAGCTAATGCCCAATTAGACAatgaaaaatcttcttttGCATATCAAGTTGACATACTAAAAGATAAATTGGAAGAATTGGAAGAAACGGCAGCTCAATTACGtagagaaattcgagaaaagaatcgagatgCTGAACAGCTGAAACGGCTCAGTCAAAGGCTAAAAGATGATTTAGATTTATGCAGATCGCAATTGTTAGAAAGAGATACACTTATCGAGGAAAATGGTTTAGTGATAGTGGAAGATGAAGGAACCGATGAGGAAAATGAAGTTGAAAGTGGGCCCTGCCATAGAAGAAGAGTATTAGTTAGTAAAGAGTCTGCAGAATTATTGCATAATGCTGGAAAAGGATCTTTGGACGTTCGACTGAGAAAGTTTGCCtctgagaaaaaagaactagaAGATCAAATACGACATTTAAGATTGGAATTAGAAGAAACCAAGAATCGCATAAGATCTGAGAGATCCCCGGGTGCAGTATTAGGTGGCTTAACAGACTCCGAAGATATTCAACGAGAAGCAAACAAGCTTTTAGCTGACTACAAATTTAAATTGCAAAAAGCCGAACAAGACATGTCTACGTTACAAGCTACAGTGGCCAGGTTAGAAAGTCAAGTAATACGTTACAAATCTGCAGCAGAAGCGTCTGAAAAGGCAGAGGATGAATTGAAAGTTGAAAAGAGGAAATTGCAAAGAGAAGTTAGAGAATCGCAAGGGCGCGTTGAAGAGCTTGAAACGGCGAACTCTCATTTACAAAGGCGATTGGATAAACTTAAAAATGCTAAATCTGCTTTATTTAAAGATCTttga
- Protein Sequence
- MESTVTGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSDPNRTMRVTPDPVRTSRLLTNSNNFQSSCKSSEDSLEDVGLGRDLRLELKEFEEKFRKAMIANAQLDNEKSSFAYQVDILKDKLEELEETAAQLRREIREKNRDAEQLKRLSQRLKDDLDLCRSQLLERDTLIEENGLVIVEDEGTDEENEVESGPCHRRRVLVSKESAELLHNAGKGSLDVRLRKFASEKKELEDQIRHLRLELEETKNRIRSERSPGAVLGGLTDSEDIQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALFKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01235024;
- 90% Identity
- iTF_01232398;
- 80% Identity
- -