Ople023562.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- -
- Assembly
- GCA_905475445.1
- Location
- FR997736.1:19730740-19733502[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-07 7e-05 23.7 0.1 1 39 15 54 15 60 0.91 2 2 1.2 5e+02 1.8 0.2 23 40 824 841 824 844 0.87
Sequence Information
- Coding Sequence
- ATGCCACGTAAATACTCTCGAACCTCTTCGCGGGCCACTTACACAAAAGAAGCGCTGCAATTAGCTatgcagaaaataaataataaggagCTCACCTATGCAGCCGCTTCAAAAATGTACGGCATTCCTACATCCACACTTAGTGATAGAATCCTGAAGAAAACAGCAATAGTAAGTAATACCCTTGGCAGGCCGACAGCTATCCCAGTGGCATTAGAATCTGAACTGGCAAACTGCCTACGAACACTGGAAAAGTGGGGTTGGGGGTTATCAAGAGAAGAGGTACTCGATGTAACtcaagattttattaaaaaaaataaaataaaaacccccTTTAATGATGGCAGACCGGGACCGGACTGGTTTATTTCTTTTCGTCAACGCCAcaatttgtcaataaaaaagCCGCAACCTGTAGAATACCtcagaaaaaaaatgacagaTCCGTTTATCATTCACGAATATTTTACTCTTCTCGAAAATACGCTCCAAGGGTTAAATATTTCGGATCCCAAGCAAATCTGGAACCTCGATGAAACTTCAGTTTGTCTCGATCCTACAAAAACTAAAGTTGTAGGTGCCAGAGGGGAGCCTTGTACACGAACGACATGTGGAAGCGCTAAAGAAAATATCACAGTTTTGACTACTGTAAATGCAGCTGGACAGAAATTGGACCCTCTGATCGTTTTTAAGGGCAAACACATGTACGAACAGTGGATGTTACAGAATCCTGAAAAATACGATTTCAATCTTGCGTATGCAGCCAGCAAACGAGGCTGGATGGAaacgaatattttttatgattacatattaaaagtatttataCCTAATTTGGGTGAAGACAGGCCTGTATTATTGTTGTATGATGGACATGTCAGTCATGTCGATGACAAAGTGGTAGCTTTAGCAGTAGAGAACAACATCACTATATTGAAGCTTCCTGCACACACATCTCATCTATTGCAACCGCTGGACTTGGCTGTGTTCAAATCTTTTAAAACAATCTGGGATAAAAACCTCGTAAAATGGCAAAGACAAAACGTTGGAATAAAATTGAGAAAGCAAAGTTTTGCTCAAATGTTTGCTGAAGCGTGGCAGGAAACCAAACCACAAGTAATTCGAAATGGCTTTAAAAAAGGTGGCATTTACCCTTTTAATCCTGCGATTATACCAAAGAACAAATATGATCCAGCAGCTTATGCAAGATGGCAAAAACACATGGCTCCGGTGACTTTTAAACAACCGAAAACTCTAACACAGATATGTATAAATGAAATTAGTAAGATCATGTATTATAATGGCTctacatttacaaataataatattgataacTCAAAAATTTTGGACTCACCGACTTTAGAACATAGAAACAGTCTACAACCACTCGCCAGTTTCGAACAAATGCTTCTAGAAAAAGTCTCACAACACCCTCAAAACTCTAAAAACAATATAGCTGTTAAGTTAAAACGAGTCGCAAAAGGTGCAGAAGTGATTACAAAATCTTTTCTAGAAAAACAGCAAGAGATAGAATTAACAAAGGAAAAAGAAATACGGAAGACAACAAAACGGAAACAAAAACTTCAATCTAAAAATGATGCATTTGATCCTATACCAGGACCATCTGGAATTCAAGATAAAAACTTAAGAACAGAAGCAACTGTAAAGAATGTGTCGATTTTGACTAATAAGAACAATACTGACGTGTGTATTTCTAAAAAAGGCAAAGGAGTAGGAAAAAAAACTAGAGCTGACaaagaaaatgatttaaaagtggACAAGTATGATGAACACAAGAAGAAAAGTGTATTAAATAAATCAGGCCAAAAGACAACTACAAAGAGAGCTATGAAAAAGCGTAAAAGATCTACTAGCAGTGTAACGACAATTGAAAGTGTTCAGATGAGCGTACATAGTGATTCTGACTTATTAGATTCTTTTAGTGACATATTATCTGACTGTGATAATTTGACTGACCTTAATATGTATGAGGAAAACAAGACTGACTTTGAATTAGCGTCTAGGGAACAACAAATTGAACAAATAGTTAAAGAAATACAGGACATGGATAATAATCAAGAGAAAAAAGCAAGCCAAAGGGATGACACCTGCGAAGAGAGATGTGAGATAATTCCAGAAATTCATACGAAAGCGACAAACGTTAAGgcaaatgataataataaagtGACTATCTTATCGTCTGTAAAAATTACACCAGAAAACCAAGCTTTCTATAAAATTTTACCCAGAAGTTTACAACTAAAGCCAATTGATAAAGATTTAGATTTGTTTACAAACCAAAAGCGAAAATTGGCACATTGTACAAGCGTTTCTGATAtaccaaagaaaaaaacaaagaaagttAATTGCCCTACAACAATAACGACAAAAGATCAAAAGGATTTAAGTAGAAACTTTTACATCAACAttgatgaagatgatgatggtgaGACCAAAAATGATATTGATGATTCGAAGAAATACAGTATTGGTGATACAGTTCTTGTTAGATATTTCAAACGAACTTGGACATATTACGTCGGTATCATTGAAAATATTGATATCAATACAAACCCAAATATGTACAAGATAACATTCTATAGAAATGTTGGCaagaaaaacaacataaaatttgTTATTCCTAAGCGTAAAGATCAAGACCGCGTACCTCATTTTAATATAGTTAAGGTTATAGAGCTACTACAGATAAATGAAGATCCTGTTGAGTACACACTTATGAATGACGATGATgaaaatttcttttaa
- Protein Sequence
- MPRKYSRTSSRATYTKEALQLAMQKINNKELTYAAASKMYGIPTSTLSDRILKKTAIVSNTLGRPTAIPVALESELANCLRTLEKWGWGLSREEVLDVTQDFIKKNKIKTPFNDGRPGPDWFISFRQRHNLSIKKPQPVEYLRKKMTDPFIIHEYFTLLENTLQGLNISDPKQIWNLDETSVCLDPTKTKVVGARGEPCTRTTCGSAKENITVLTTVNAAGQKLDPLIVFKGKHMYEQWMLQNPEKYDFNLAYAASKRGWMETNIFYDYILKVFIPNLGEDRPVLLLYDGHVSHVDDKVVALAVENNITILKLPAHTSHLLQPLDLAVFKSFKTIWDKNLVKWQRQNVGIKLRKQSFAQMFAEAWQETKPQVIRNGFKKGGIYPFNPAIIPKNKYDPAAYARWQKHMAPVTFKQPKTLTQICINEISKIMYYNGSTFTNNNIDNSKILDSPTLEHRNSLQPLASFEQMLLEKVSQHPQNSKNNIAVKLKRVAKGAEVITKSFLEKQQEIELTKEKEIRKTTKRKQKLQSKNDAFDPIPGPSGIQDKNLRTEATVKNVSILTNKNNTDVCISKKGKGVGKKTRADKENDLKVDKYDEHKKKSVLNKSGQKTTTKRAMKKRKRSTSSVTTIESVQMSVHSDSDLLDSFSDILSDCDNLTDLNMYEENKTDFELASREQQIEQIVKEIQDMDNNQEKKASQRDDTCEERCEIIPEIHTKATNVKANDNNKVTILSSVKITPENQAFYKILPRSLQLKPIDKDLDLFTNQKRKLAHCTSVSDIPKKKTKKVNCPTTITTKDQKDLSRNFYINIDEDDDGETKNDIDDSKKYSIGDTVLVRYFKRTWTYYVGIIENIDINTNPNMYKITFYRNVGKKNNIKFVIPKRKDQDRVPHFNIVKVIELLQINEDPVEYTLMNDDDENFF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01118234;
- 90% Identity
- iTF_00038693; iTF_00952669; iTF_00667359;
- 80% Identity
- -