Mcon021743.1
Basic Information
- Insect
- Mamestra configurata
- Gene Symbol
- -
- Assembly
- GCA_002192655.2
- Location
- NDFZ01000786.1:5586-8354[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-07 7.3e-05 23.0 0.1 1 39 16 55 16 61 0.91 2 2 3.1 1.2e+03 -0.1 0.2 24 40 827 843 826 846 0.84
Sequence Information
- Coding Sequence
- ATGCCACGTAAATACTCCCGAACCTTTTCACGGGCCACTTCTTATACAAAAGAAGCGCTGCAATTAGCCATgcggaaaataaataataaggagcTCACCTATGCAGCCGCTTCAAAAATGTACGGCATACCTACGTCCACACTTAGTGATAGAATCCTGAAGAAAACAGCGATAGTAAGTAATACCCTTGGCAGGCCGACAGCTATCCCAGTGGCATTAGAATCTGAACTGGCAAACTGCCTAAGAACACTGGAAAAGTGGGGTTGGGGGTTATCAAGAGAAGAGGTACTCGATGTAActcaagattttataaaaaaaaataaaataaaaacccccTTCAATGATGGCAGACCGGGACCGGACTGGTTTATTTCTTTTCGTCAACGCCACAATTTGTCAATAAAAAAGCCGCAACCTGTAGAatacttcagaaaaaaaatgacaGATCCGTTTATCATTCACGAATATTTTACTCTTCTCGAAAAGACTCTCCAGGGGTTAAATATTTCAGATCCCAAGCAAATCTGGAACCTCGATGAAACTTCAGTTTGTCTCGATCCTACAAAAACTAAAGTTGTTGGTGCCAGAGGGGAGCCTTGTACACGAACAACATGTGGAAGCGCTAAAGAAAATATCACAGTTTTGACTACTGTAAATGCAGCTGGACAGAAATTGGACCCCCTGATCGTTTTCAAGGGCAAACACATGTACGAACAGTGGATGTTACAGAATCCTGAAAAATACGATTTCAATCTTGCGTATGCAGCCAGCAAACGAGGCTGGATGgaaacgaatattttttatgattacatattaaaagtatttatacCTAATTTGGGTGAAGACAGGCCCGTATTATTGTTGTATGATGGACATGTCAGTCATGTCGATGACAAAGTGGTAGCTTTAGCAGTTGAGAACAACATCACTATATTGAAGCTTCCTGCGCACACATCACATCTATTGCAACCGCTAGACTTGGCTGTGTTCAaatcttttaaaacaatttggGATAAAAACCTCGTAAAATGGCAAAGACAAAACGTTGGAATAAAATTGAGAAAGCAAAGTTTTGCTCAAATGTTTGCTGAAGCGTGGCAGGAAACCAAACAACAAGTAATACGAAATGGCTTTAAAAAAGGTGGCATTTACCCTTTCAATCCTGCGATTATACCAAAGAACAAATATGATCCAGCAGCTTATGCACGATGGCAAAAACACATGGCTCCGGTGACTTTTAAACAACCGAAAACTATAACACAGATATgtgtaaatgaaattaataagaTCATGTCTTATCACGGCTCTACttctacaaataataatattgataactCTAAAATTTTGGACTCACCGACTTTAGAACATAGAAACAGTCTGCTACAACCACTTGCCAGTTTCGAACAAATGCTACTAGAAAAAGTTTCGCAACACCCTCAAAACTCTAAGAACAATATAGCTGTTAAGTTAAAACGAGTCGCGAAAGGTGCAGAAGTGATTACAAAATCTTTTCTAGAAAAACAGCAAGagatagaattaacaaatcaaaaagAAATACAGAAGACAACAAAACGGAAACAAAAACTTCAATCTAAAAATGATGCATTTGATCCTATACCAGGACCATCCGGAATTCAAGATAAAAACTTAAGAACAGAAGCAACTGTAATGAATGTGTCCATTTTGACTAATAAGAGCAACACTGACGTGTGTATTTCTAAAAAAGGcaaaggagtaggaaaaaaaactAGAGCTGacaaagaaaatgatttaaaagtggACAAGTATGATGAACACAGGAAGAAAagtgtattaaataaatcagGCCAAAAGACAACTACAAAGACAGCTATGAAAAAGCGTAAAAGATCTAATAGCAGTGTAACGACAATTGAAAGTGTTCAGATGAGCGTACATAGTGATTCTGACTTATTAGATTCTTTTAGTGACATATTATCTGACTGTGATAAATTGACTGACTTTAATATGTATGAGGAAAACAAGACTGACTTGGAATTAGCATCTAGGGAACAACAAATTGAACAAATAGTTAAAGAAATACAGGACATGGATAATAATCAAGAGAAAAAAGCATGCCAAAGGGATGATACCTGCGAAGAGAGATGTGAGATAATTCCAGAAATTCATACGAAAGAGACAAACGTTAAggcaaatgataataataaagtgactatcTTATCGTCTGTAAAAATCACACCAGAAAACCAAGCTTTCTATAAAATTTTACCCAGAAGTTTACAACTAAAGCCAATTGATAAAGATTTAGATTTGTTTACAAACCAAAAGCGAAAACTGACACATAGTACAAGCGTATCTAATataccaaagaaaaaaacaaagaaagttaATTGCCCTACAAAAATAACGACAAGAGATAAAAAGGATTTAAGTGGAAACTTTTATATCAACATTGAtaaagatgatgatggtgacacCAAAAATTATATTGATGATTCGAAGACATACAGTATTGGGGATACAGTTCTTGTTAGATATTTCAAACGAACTTGGACATATTACGTCGGTatcattgaaaatattaatatcaattcAAACCCAAATATGTACAAGATAACATTCTATAGAAATGTTGGCaagaaaaacaacataaaatttgCTATTCCTAAGCGTAAAGATCAAGACTGCGTACCTGATTCTAATATAGTTAAGGTGATAGAACTGCTACAGATAAATGAAGATCCTGTTGAGTATACCCTTAtgaatgacgatgatgaaaatttcttttaa
- Protein Sequence
- MPRKYSRTFSRATSYTKEALQLAMRKINNKELTYAAASKMYGIPTSTLSDRILKKTAIVSNTLGRPTAIPVALESELANCLRTLEKWGWGLSREEVLDVTQDFIKKNKIKTPFNDGRPGPDWFISFRQRHNLSIKKPQPVEYFRKKMTDPFIIHEYFTLLEKTLQGLNISDPKQIWNLDETSVCLDPTKTKVVGARGEPCTRTTCGSAKENITVLTTVNAAGQKLDPLIVFKGKHMYEQWMLQNPEKYDFNLAYAASKRGWMETNIFYDYILKVFIPNLGEDRPVLLLYDGHVSHVDDKVVALAVENNITILKLPAHTSHLLQPLDLAVFKSFKTIWDKNLVKWQRQNVGIKLRKQSFAQMFAEAWQETKQQVIRNGFKKGGIYPFNPAIIPKNKYDPAAYARWQKHMAPVTFKQPKTITQICVNEINKIMSYHGSTSTNNNIDNSKILDSPTLEHRNSLLQPLASFEQMLLEKVSQHPQNSKNNIAVKLKRVAKGAEVITKSFLEKQQEIELTNQKEIQKTTKRKQKLQSKNDAFDPIPGPSGIQDKNLRTEATVMNVSILTNKSNTDVCISKKGKGVGKKTRADKENDLKVDKYDEHRKKSVLNKSGQKTTTKTAMKKRKRSNSSVTTIESVQMSVHSDSDLLDSFSDILSDCDKLTDFNMYEENKTDLELASREQQIEQIVKEIQDMDNNQEKKACQRDDTCEERCEIIPEIHTKETNVKANDNNKVTILSSVKITPENQAFYKILPRSLQLKPIDKDLDLFTNQKRKLTHSTSVSNIPKKKTKKVNCPTKITTRDKKDLSGNFYINIDKDDDGDTKNYIDDSKTYSIGDTVLVRYFKRTWTYYVGIIENININSNPNMYKITFYRNVGKKNNIKFAIPKRKDQDCVPDSNIVKVIELLQINEDPVEYTLMNDDDENFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01118234;
- 90% Identity
- iTF_01085123;
- 80% Identity
- -