Basic Information

Gene Symbol
-
Assembly
GCA_905147175.1
Location
LR990005.1:3607221-3616721[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 5.1 8.4e+03 -2.4 0.0 29 45 114 130 111 131 0.82
2 7 0.044 73 4.2 0.0 22 45 345 369 311 370 0.86
3 7 0.00029 0.47 11.2 0.2 23 44 446 466 417 468 0.84
4 7 0.15 2.4e+02 2.5 0.0 23 45 593 614 582 615 0.85
5 7 4.2e-05 0.07 13.9 0.5 3 44 666 716 664 718 0.83
6 7 0.00082 1.3 9.8 0.0 14 45 836 874 831 875 0.83
7 7 9 1.5e+04 -3.2 0.0 26 44 1057 1078 1055 1079 0.75

Sequence Information

Coding Sequence
ATGGAAAAAATAGTGGTTAAAACTGAGGTTCAACCGAATGGAGATATACTGCTTTTTTACGTTGATGAAAATGAAGAGACAGATCTACAAGGTTTGGAGAATGAAGTTCAAAATAATGTCCAAATTTTGCCAGATACTAAGTATATCATCGAAGAAGATCTCGGTGGAGGGGAGTCAGCTGAGGAACTGGATATAGCTCAGGCATCAGAACAAGTTTCAAATGAAATCTGGCTAGAGGATGAAATAAAGCGACTCATAGTTTTCTATCTTGATAATAAAGAAACATTTCTTAGCGGAGCTACAAAGAAAACACATTTATGGGCTGTTGCATGTAAGACAATGCTGGCTGGTAAAACTCCTATATCCTGTGAAGTTAAATTTAGAGATTTAAAACGGAAATATGTCCAAGTATGCCATGAAAATCAGAATGGAGAGACCATTAATTGGCATTATTACGATTTGTGTAACCAGGCTTTTCACGATGATAACTTTGTTAAAATGTGCCTCAGTGAAACTAGTCGCGATAATCAAGTTACTGTGAATATGCCTGTTAAAAATGTTGTCAACCAAGATGGTATATTAGTTGTAAAAAAAGTGAACAGTGGTCAAAACAAGGATGAGCAAGTTGAGGCAATGCTCAATTCATACATCAAACATAAGTCTTTCTTTCAGAAGCAGTATAATTCGCAGAGAGGTTTATGGGAGGCTATCGCTATGGATTTGGGAGAAGAAGATGTTGATTATTGGCACAAACGTTTCTTAAACTTTAAACAACATTATATAAGGATGATCTACAAACGTAAGGAAAGTGGGCCTGGAAGCATTAATTGGCCATATATGAAATATTTTGATCAAATATTTGGTGATGATGAAGATTTCTTACGTAAATATTTACATAATGAAGAAAATGACTCAACAGTCTCTATATTCATTGAAAATTATGAAAATTCCTGGAATGATGTAGAAATAACCTTTTTGGTTAAGTATTATTTTGATTGCTTCAATGAATTCCATGACCCGAGCATACCAAATCAATTCTTATGGCAAGAAGTGGGCAGATTATTAGATAAAACTCCAGAAAATTGTGAGAAAAAATTTGAAAATCTTAAGGACAAGCATTTTGATAAACTTATAGAGGGTAACTATGATTTAGCTAATAGAATACCATTAGCTATAATATTTGATAACATAATAGCTAAGGAAGTAGAAATGGAAGTTAACAATCCCGAAAAAGATGGTCCGGATCTATGGAAGACGGAACAAATTGACGAATTAGTTCAGTATCTGTATGAAAATATAGATATGTTAAAAGATCCTGTGTGTTATTATGTTAGTTGGGCATCACTTGCAAGGAAATTGAATAGAAGTGTAACATCTTGTCGGAAACAATGGAATGATCTGACTACGCTTTATAAGAATATTTTAGATGATAAAAAAGAAAATCCTGATATGCAAATTGACTGGAGGTACATTGATTTATTTGATAGGATATTTGATTATGGAATGGATAGTAATCTGCTGGATGGATACGAGAAATTGAAAGAACTCGGCCAGGTTAATAAATCGAATAAAGTGGGAGTTAAAAAGATCACCATCAAAGATAATGATGACAAATTCCTTGAAAATGGAACAGACGATGAGGAATTCTACGACGAAAGAGGTTTTACAAAACGTTCCAAGAAACGGAACGGCGATGCCAAAGCGTTCAAAATATTAGAATTCTATTTAAAAAATAAAGATAGATTCGCATCATCACAGCAAAAGAAATTAGCACTATGGGAAATATTGGCACGCCAAATAGGTGTTACAGCAACGGAATGCGCTCACAGATTTCGTAATTTCAAACAAGTGTACACGGGATATGTTCAAAGAGAAATAAATAAGCCTGAAATGCCAATACTCTGGCCATATTACAGCCTTTGCAAGAAAGTATTTGGATATAGAGCCATAAAATCTAAATTGAAAAACGGAAAGATGGATTCGGATGACGCAGAAGACTGGTCTGCAAAAGAAATCAAGCAATTGATCAATTATTTTTCTAGAAACTTCAGTAATTTCCAAGAAAACATCGAAGAGAAAAGCAAATGGACGGAAATAGCTCAAGAAATTAGTAGAACCGAAACGAGTTGTTGTGACAAGTTTCTCGAGTTGAGGAAGTCGTATAGAAAGTTGAAGACAATGAAAGCCCGTAATCCAGATGTGAAAGTGTCCTGGAAATATTTTAATATGCTTGATGATATTTATAAATATGGTGAACAAAATTGTGAAGTTCTGGAAACTATGGAAGTCGACGATTGCAATGATGAGGAGAATGCATTAAAGCTGGAAATGCAGGAAGATGACGATTATCAATGTATCATCGTTATACCTGAAGGCGAAGATATTGATAATGCTCAAATCATGATTCAAGGACAAGATCAGGAGACTACAGAAATGACACATTCGAAGCAAATCATAACTAAGTGGAATAGAAGAAGCAAAAACCGACTTCTAATACTTTATTTAAATTACCTGAGGATGCACAAAGGACAGGAGATTAATCAAAGAGAAATGTGGACGGAGATTGCGTCGAAGTTGGAAGAAAAAACACCCATTTCTTGCAAGAAAATGTTCTTAAAATTAAAAAATCAACACAAACAACTTAACGAAACTGACTTCAAACTTCCATATAGTGCCCTCATAGAAAAAATTCTAACTTTCAAGCCCAAATTTGTCAAATCAAACAAAAATAAGGATTTAGAGGACATTAATACTTATGAAGACATACCAATGTCCGATGAGAAGGTTTACAATGCTCTAAATTATTACTTGCAAAACCTTGAAGACTTTGTCAGCCCGAAGTTTGAGCAGAAGTATCTTTGGACGGAACTAGCGAAATTTATTTCAGAGCCAGTCAACAATATATTCAGCAAAATTAACTACTTGAAGCAAACATTTGATAGTGAAATAGACACTCCCTTTAAGGAGATCTTACACGAAATATTGACAAAGGAAAATGCACTCAGAGAGGAAATAAATAAGGATCCTGATCCAATCACAGAGGAGGATAGCGAACAAACATGGTCTGATATTGAAACCGAACGTCTTCTAACATGGTACTTGGCCCATTTGGATAAGTTTAAGAACCCGAAGTTCGTTCGTAGCTATCTATGGATGGAGGCGTCCGATATATTGAAGAAAAGTCCATTAGTTTGTTCGAAGAAAATGTCCGAAGTACGATCCCAGTACAGGACGATGGTTAGAGAAAATCCAGAGGAATTAGATAATTGGAAATTTTACAACCTGTGCCAGAGAATCTATGGAACTGGAAAGAAAAGCTCGAATAGTACAGAGGTCTAG
Protein Sequence
MEKIVVKTEVQPNGDILLFYVDENEETDLQGLENEVQNNVQILPDTKYIIEEDLGGGESAEELDIAQASEQVSNEIWLEDEIKRLIVFYLDNKETFLSGATKKTHLWAVACKTMLAGKTPISCEVKFRDLKRKYVQVCHENQNGETINWHYYDLCNQAFHDDNFVKMCLSETSRDNQVTVNMPVKNVVNQDGILVVKKVNSGQNKDEQVEAMLNSYIKHKSFFQKQYNSQRGLWEAIAMDLGEEDVDYWHKRFLNFKQHYIRMIYKRKESGPGSINWPYMKYFDQIFGDDEDFLRKYLHNEENDSTVSIFIENYENSWNDVEITFLVKYYFDCFNEFHDPSIPNQFLWQEVGRLLDKTPENCEKKFENLKDKHFDKLIEGNYDLANRIPLAIIFDNIIAKEVEMEVNNPEKDGPDLWKTEQIDELVQYLYENIDMLKDPVCYYVSWASLARKLNRSVTSCRKQWNDLTTLYKNILDDKKENPDMQIDWRYIDLFDRIFDYGMDSNLLDGYEKLKELGQVNKSNKVGVKKITIKDNDDKFLENGTDDEEFYDERGFTKRSKKRNGDAKAFKILEFYLKNKDRFASSQQKKLALWEILARQIGVTATECAHRFRNFKQVYTGYVQREINKPEMPILWPYYSLCKKVFGYRAIKSKLKNGKMDSDDAEDWSAKEIKQLINYFSRNFSNFQENIEEKSKWTEIAQEISRTETSCCDKFLELRKSYRKLKTMKARNPDVKVSWKYFNMLDDIYKYGEQNCEVLETMEVDDCNDEENALKLEMQEDDDYQCIIVIPEGEDIDNAQIMIQGQDQETTEMTHSKQIITKWNRRSKNRLLILYLNYLRMHKGQEINQREMWTEIASKLEEKTPISCKKMFLKLKNQHKQLNETDFKLPYSALIEKILTFKPKFVKSNKNKDLEDINTYEDIPMSDEKVYNALNYYLQNLEDFVSPKFEQKYLWTELAKFISEPVNNIFSKINYLKQTFDSEIDTPFKEILHEILTKENALREEINKDPDPITEEDSEQTWSDIETERLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMSEVRSQYRTMVRENPEELDNWKFYNLCQRIYGTGKKSSNSTEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00985050;
80% Identity
-