Basic Information

Insect: Vanessa cardui
Gene Symbol: -
Assembly: GCA_905220365.1
Location: LR999950.1:6072444-6078500[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.047 69 4.2 0.0 23 43 348 367 341 370 0.84

2 7 0.0015 2.2 9.0 0.3 23 43 446 465 417 467 0.84

3 7 0.12 1.7e+02 2.9 0.0 23 45 593 614 581 615 0.87

4 7 2.2e-05 0.032 14.9 0.4 3 44 666 716 664 718 0.82

5 7 0.0028 4.1 8.1 0.0 15 45 845 882 839 883 0.80

6 7 5 7.2e+03 -2.3 0.3 2 14 1027 1039 1026 1044 0.85

7 7 8.2 1.2e+04 -3.0 0.0 26 44 1065 1086 1063 1087 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.047	69	4.2	0.0	23	43	348	367	341	370	0.84
2	7	0.0015	2.2	9.0	0.3	23	43	446	465	417	467	0.84
3	7	0.12	1.7e+02	2.9	0.0	23	45	593	614	581	615	0.87
4	7	2.2e-05	0.032	14.9	0.4	3	44	666	716	664	718	0.82
5	7	0.0028	4.1	8.1	0.0	15	45	845	882	839	883	0.80
6	7	5	7.2e+03	-2.3	0.3	2	14	1027	1039	1026	1044	0.85
7	7	8.2	1.2e+04	-3.0	0.0	26	44	1065	1086	1063	1087	0.75

Sequence Information

Coding Sequence: ATGGAAAAAATAGTGGTTAAAACAGAGGTACAGCCAAATGGAGATATACTGCTCTTTTACGTTGATGAAAATGAAGAAACTGATCTACGAGGTTTGGAAAATGAAGTTCAAAATAATGTACAAATATTGCCAGATACTAAGTACATCATTGAGGAAGATCTCGGCGAAGGAGAGTCAGCTGAGGAACTGGACATAGCTCAGGCAACAGAACAGGTTTCCAATGATATATGGCTAGAAGATGAAATAAAACGACTCATAGTTTTCTATCATGATAATAAAGAAACATTTCTTAGTGGAACTACTAAGAAAACACATTTATGGGCTGTTGCATGTAAAACAATGCTGGCCGGTAAAACTCCTATATCATGTGAAGTAAAATTAAGAGAATTAAAAAGAAAATATGTTCAAGTGTGCCTCGAAAATCAAAATGGAGCGACCATTACATGGAATTATTACAATTTGTGTAATCAGGCATTTCATGATGACAACTTTGTTAAAATGTGCCTCAGTGAAAATAGTTGCGATAATCAAGTTACTGTGAATATGCCAGTTAAAAATGTTGTCAATCAGGATGGTATATTAGTTGTAAAAAAAGTAAACAGTTGTCAAAATAAAGACGAGCAAGTCGAGGCAATGCTCAATTCATACATCAAACACAAGAGTTTCTTTCAGAAACAGTATAATACACAGAGGGGCTTATGGGAGGCTATTGCTATGGATCTGGGTGAAGACGATGTTGATTATTGGCACAAACGCTTCTTAAACTTCAAACAACACTATATAAGGATGATATACAAACGTAAGGAAAGTGGAGCTGAAAGTATAAATTGGCCGTACATGAAATATTTTGATCAAATATTTGGTGATGATGAAGATTTCTCACGTAAATATTTATATGGCGATGAAAATGACAGTAAAGTAACAATAATGATTGAAAATGATCCAAATTCCTGGAACGATATAGAGACAACGTTTTTGGTTAAATATTATTTTGATTGCTTCAATGAGTTCCATGATCCGAGCATACCAAATAAATTTTTATGGCAAGAAGTTGCTCGATTAATAGACAAGACACCTGAAAATTGTGAGAAAAAATTTGAAGATCTTAAAAATGAGCATTTCGATAAACTCGTAGAAGGTGACTATGATTTAGCGAACCGGATACCATTAGCTATTCTGTTCGATAACATAATCGCTAAGGAAGTGGAAATGGAAGTTAATAACCCTGAAAAAGACGGTCCTGATCTATGGAAGACGGAACAAATAGACGAATTAGTGCAGTATTTGTACGAAAATATAGATATGTTAAAAGATCCCGTATGTTATTATGTTAGTTGGGCGTCCCTTGCGAGGAAATTGAAAAGAAGTGTAACGTCTTGTCGGAAACAATGGAACCATCTAACTACACTTTACAAGAACATTTTAGATGATAAAAAAGAAAATCCTGATATGCAAATAGACTGGAGGTATATTGACTTATTCGATAGAATATTTGATTACGGTATGGATAGCAATCTATTAGATGGATATGAGAAGTTGAAAGAACTTGGTCAAGTAAATAAATCAAATAAAGTGGGAGTTAAAAAGATCACCATCAAAGATAATGATGACAAATTCCTTGAAAATGGAACTGATGACGAGGAACTCTACGACGAAAGAGGTTTTACAAAGCGTTCGAAAAAACGCAACGGAGAGGCCAAATCGTTCAAAATACTAGAATTCTATTTGAAAAATAAAGACAAATTTGCATCATCACAGCAGAAGAAATTGGCGCTATGGGAAGTCTTGGCACGACAAATAGGCGTTACAGCAACGGAATGCGCACACAGATTTCGCAATTTCAAACAAGTATACACGGGGTACGTTCAAAGGGAAATAAATAAGCCCGAAATGCCCATACTTTGGCCATACTACAACATTTGCAAGAAAGTATTCGGCTACAGAGCCATAAAATCTAAATTGAAAAACGGGAAGATGGATTCCGACGACGCAGAAGATTGGTCCGCAAAAGAAATCAAGCAATTGATCAATTATTTTTCAAGAAACTTCAGCAATTTCCAGGAAAATATCGAAGAGAGAAGCAAATGGTCGGAAATAGCCCAAGAAATTAGTAGGACCGAAACGAGTTGCTGTGACAAGTTTCTTGAGTTGAGGAAGTCTTACAGAAAATTGAAGACGATGAAAGCCCGTAACCCAGATGTTAAAGTCTCCTGGAAATATTTCAATATGCTCGATGACATTTACAAATATGGCGAACAGAACTGTGAAGTTCTGGAAACAATGGAAGTTGATGAGTGCCATGATGATGGTAATGAATTAAAGTTGGAAATGCAGGAAGATGACGATTACCAATGTATCATCGTTATACCCGAAGGCGAAGATATTAATAATACTCAAATCATTATACAAGAACATGATCAAGATCAAGAACAAGATAACAGTCAAGAGGCAACAGAATTGACAAATTCGAAGCAAATTATAACGAAATGGAATAAGCGAAGTAAGAAACGACTTCTCATCCTTTATCTAAATTATCTAAGGACGCACAAAGGACAGGAGATTAATCAAAGAGAAATGTGGACGGAAATCGCGTCGAAATTAGACGAAAAAACACCAATTTCGTGCAAGAAAATGTTCTTAAAATTAAAAAATCAACACAAGCAACTCAACGAAACTGACTTCAAACTCCCGTACAGTGTCCTCTTAGAGAAAATCCTCGCTTTCAAACCTAAATTTGCCAAATCAAACAAAAATAAGGACTTGGAAGAAATTAATACATACGAGGACATACCGATGTCTGATGAGAAAGTTTACAATGCTTTGAATTATTACTTGCAAAATCTCGAAGATTTTGTCAGTCCGAAATTTGAGCAGAAATATCTTTGGACGGAATTAGCGAAATTCATCTCTGAACCAGTCAACAAAATATTCAGCAAAATTAACTATTTGAAGCAAACATTCGATAACGAAATAGATACTCCCTTTAAGGAAATCTTGCATGAAATTTTGACAAAGGAAAATGCACTTAGAGAGGAAATAAATAAGGATCCTGATCCAATAACAGAGGAGGAAAGTGAACAACCATGGTCTGATATTGAAACTGAGAGACTCCTAACATGGTACTTGGCCCATTTGGATAAGTTTAAGAACCCGAAATTCGTTCGAAGTTATTTATGGATGGAGGCGTCGGATATATTAAAGAAAAGTCCACTGGTTTGTTCGAAGAAAATGTCCGAAATACGATCCCAGTACAGAACGATGGTTAGAGAGAATCCAGAGGAATTGGACAGCTGGAAATTTTACAATCTGTGTCAGAGAATTTATGGAACTGGTAAGAAGACATTGACTAGTAACAAGGGTCTTGAAGATATATAA
Protein Sequence: MEKIVVKTEVQPNGDILLFYVDENEETDLRGLENEVQNNVQILPDTKYIIEEDLGEGESAEELDIAQATEQVSNDIWLEDEIKRLIVFYHDNKETFLSGTTKKTHLWAVACKTMLAGKTPISCEVKLRELKRKYVQVCLENQNGATITWNYYNLCNQAFHDDNFVKMCLSENSCDNQVTVNMPVKNVVNQDGILVVKKVNSCQNKDEQVEAMLNSYIKHKSFFQKQYNTQRGLWEAIAMDLGEDDVDYWHKRFLNFKQHYIRMIYKRKESGAESINWPYMKYFDQIFGDDEDFSRKYLYGDENDSKVTIMIENDPNSWNDIETTFLVKYYFDCFNEFHDPSIPNKFLWQEVARLIDKTPENCEKKFEDLKNEHFDKLVEGDYDLANRIPLAILFDNIIAKEVEMEVNNPEKDGPDLWKTEQIDELVQYLYENIDMLKDPVCYYVSWASLARKLKRSVTSCRKQWNHLTTLYKNILDDKKENPDMQIDWRYIDLFDRIFDYGMDSNLLDGYEKLKELGQVNKSNKVGVKKITIKDNDDKFLENGTDDEELYDERGFTKRSKKRNGEAKSFKILEFYLKNKDKFASSQQKKLALWEVLARQIGVTATECAHRFRNFKQVYTGYVQREINKPEMPILWPYYNICKKVFGYRAIKSKLKNGKMDSDDAEDWSAKEIKQLINYFSRNFSNFQENIEERSKWSEIAQEISRTETSCCDKFLELRKSYRKLKTMKARNPDVKVSWKYFNMLDDIYKYGEQNCEVLETMEVDECHDDGNELKLEMQEDDDYQCIIVIPEGEDINNTQIIIQEHDQDQEQDNSQEATELTNSKQIITKWNKRSKKRLLILYLNYLRTHKGQEINQREMWTEIASKLDEKTPISCKKMFLKLKNQHKQLNETDFKLPYSVLLEKILAFKPKFAKSNKNKDLEEINTYEDIPMSDEKVYNALNYYLQNLEDFVSPKFEQKYLWTELAKFISEPVNKIFSKINYLKQTFDNEIDTPFKEILHEILTKENALREEINKDPDPITEEESEQPWSDIETERLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMSEIRSQYRTMVRENPEELDSWKFYNLCQRIYGTGKKTLTSNKGLEDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00985050;
90% Identity: iTF_01080672;
80% Identity: -