Basic Information

Gene Symbol
-
Assembly
GCA_905147765.1
Location
LR990574.1:3411510-3417190[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.27 3.2e+02 1.8 0.0 22 43 345 367 341 370 0.83
2 6 0.00085 1 9.9 0.2 23 44 446 466 417 468 0.84
3 6 0.032 38 4.8 0.0 23 45 593 614 580 615 0.88
4 6 7.3e-05 0.086 13.3 0.3 3 44 666 716 664 718 0.80
5 6 0.0056 6.7 7.2 0.0 22 45 852 878 839 879 0.79
6 6 8.6 1e+04 -3.0 0.0 26 44 1061 1082 1059 1083 0.75

Sequence Information

Coding Sequence
ATGGAAAAAATAGTAGTTAAAACGGAGGTACAACCAAATGGAGATATACTGCTCTTTTACGTCGATGAAAATGAAGAATCTGATCTCCGAGGTTTGGAAAATGAAGTTCAAAATAATGTACAATTATTGCCAGATACTAAGTACATAATTGAAGAAGACCTAGGTGAAGGGGAGTCAGCTGAGGAACTGGATATAGCCCAGGCATCAGAACAGGTTTCCAATGATATTTGGTTAGAAGATGAAATAAAACGACTCATAGTTTTCTATCTTGATAATAAAGAAACATTTCTTAGTGGAGCTACAAAGAAAACACATTTATGGGCTGTTGCGTGTAAAACAATGCTGGCTGGTAAGACTCCAATATCATGTGAAGTAAAATTAAGAGAATTAAAAAAAAAATATGTTCAAGTGTGCCTCGAAAATCAGAACGGAGGTACCATAATTTGGAATTATTACAATTTGTGTAATCAGGCATTTCACGATGACAACTTTGTTAAAATGTGCCTTAGTGAAAATAATAGCGATAATCAAATTACTGTGAATATGCCAGTTAAAAATGTTGTCAACCAAGATGGTATATTAGTTGTTAAAAAAGTCAATAGTTGTCAAAACAAAGATGAGCAAGTTGAAGCAATGCTCAATTCATACATCAAACACAAGACTTTCTTTCAGAAACAGTATAATACACAGAGAGGCTTATGGGAGGCTATTGCTATGGATTTGGGAGAACAGGATGTTGATTATTGGCACAAACGTTTCTTAAACTTCAAACAACACTATATAAGGATGATCTACAAACGTAAGGAAAGTGGAGCTGATAGTATTAATTGGCCATACATGAAATACTTTGATAAAATATTTGGTGATGACGAAGATTTCTCACGTAAATATTTATACAGTGAAGAAAATGACACTAAAGTCTCTATAATGATTGAAAATGATCCAAATTCCTGGAATGATATTGAAATAACATTTTTGGTTAAGTATTATTTCGATTGTTTCAATGAATTCCACGATCCGAGCATACCAAATAATTTTTTATGGCAAGAAGTTGGTAGATTAATAGACAAGACACCGGAAAATTGTGAGAAAAAATTTGAAGATCTTAAGAATGAACATTTCGATAAACTCGTAGAAGGTGACTATGATTTAGCAAATCGGATACCGTTGGCTATTTTGTTTGATAACATAATAGCCAAAGAAGTAGAAATGGAGGTTAATAGCCCCGAAAAAGATGGTCCTGATCTATGGAAGACGGAGCAAATTGATGAATTGGTGCAGTATTTGTATGAAAATATAGATATGTTAAAAGATCCTGTGTGTTATTATGTCAGTTGGGCATCCCTTGCGAGGAAATTGAAAAGAAGTGTAACATCTTGTCGTAAACAATGGAACGATCTGACTACACTTTATAAGAACATTTTAGATGATAAAAAAGAAAATCCTGATATGCAAATAGACTGGAGGTACATTGACTTATTTGATAGAATATTTGATTACGGTATGGATAGCAATCTACTGGACGGATACGAGAAGTTGAAAGAACTCGGTCAAGTAAATAAATCTAATAAAGTGGGAGTTAAAAAGATCACCATCAAAGATAACGATGATAAATTCCTTGAAAATGGAACAGATGACGAGGAACTCTACGACGAAAGAGGTTTTACAAAGCGTTCCAAAAAACGCAACGGAGACGTAAAAGCTTTCAAAATACTAGAATTCTATTTAAAAAATAAAGATAAATTTGCATCATCGCAGCAGAAGAAATTGGCACTATGGGAAATCTTGGCACGACAAATAGGCATTACAGCAACGGAATGCGCTCACAGATTCCGCAATTTCAAACAAGTTTACACGGGATACGTTCAAAGGGAAATAAATAAGCCCGAAATGCCCATACTTTGGCCATACTACAACCTTTGCAAGAAAGTATTCGGCTATAGAGCCATAAAATCGAAATTGAAAAACGGGAAGATGGATTCTGACGACGCAGAAGACTGGTCCGCAAAGGAAATCAAGCAGTTGATCAATTATTTTTCTAGAAACTTCAGCAATTTCCAAGAAAATATCGAAGCAAGAAGCAAATGGACAGAAATAGCCCAAGAAATCAGTCGGACCGAAACAAGTTGTTGTGATAAATTTCTTGAGTTAAGGAAGTCTTATAGAAAATTGAAGACGATGAAAGCCCGTAATCCAGATGTTAAAGTCTCCTGGAAATATTTTAATATGCTCGATGACATTTATAAATATGGTGAACAAAACTGTGAAGTTCTGGAAAATATGGAAGTTGATGAGTGCAATGATGATGATAATGAATTAAAGCTGGAAATGCAGGAAGATGATGATTATCAATGTATCATCGTTATACCCGAAGGCGAAGACATTAATAATACTCAAATTATTATTCAAGAACAAGAACAAGATCAAGATCAAGAGGCCACAGAAATAACAAATTCAAAGCAAATCATAACGAAATGGAATAAGCGAAGTAAAAAACGACTTCTAACCCTTTATCTAAATTACCTAAGGGTGCACAAAGGACAGGAGATTAATCAAAGAGAAATGTGGACCGAAATTGCGTCGAAATTAGATGAAAAAACGCCCATTTCATGCAAGAAAATGTTCTTAAAACTAAAAAATCAACACAAGCAACTTAACGAAGCTGACTTCAAACTTCCGTATAGTAACCTCTTAGAGAAAATCCTCACTTTTAAACCTAAATTTGCCAAATCAAACAAAAACAAGGATTTAGAAGAAATCAATACTTACGAAGACATACCAATGTCCGATGAGAAAGTTTACAATGCTTTAAATTATTACTTGCAGAATCTTGAAGATTTTGTCAGCCCAAAATTTGAGCAGAAATATCTTTGGACGGAACTAGCGAAATTCATTTCTGAGCCAGTCAACAAAATATTCAGTAAAATTAACTACTTGAAGCAAACATTTGATAGTGAAATAGAAACTCCTTTTAAGGAGATCTTGCATGAAATATTGACAAAGGAAAATGCACTCAGAGAGGAAATAAATAAGGATCCTGATCCAATAACAGAGGAGGATAGTGAGCAAACATGGTCGGATATTGAAACTGAGCGTCTTCTAACATGGTACTTAGCCCATTTGGATAAGTTTAAGAATCCGAAGTTCGTTCGAAGTTATCTATGGATGGAAGCCTCCGATATATTGAAGAAGAGTCCACTGGTTTGTTCGAAGAAAATGTCCGAGATACGATCCCAGTACAGAACAATGGTTAGAGAAAATCCAGAGGAATTAGACAACTGGAAGTTTTACAATCTGTGTCAGAGAATTTATGGAACTGGGAAGAAGAGCTCGACTAGTAACAAGGGTCTTGAAGATATATAA
Protein Sequence
MEKIVVKTEVQPNGDILLFYVDENEESDLRGLENEVQNNVQLLPDTKYIIEEDLGEGESAEELDIAQASEQVSNDIWLEDEIKRLIVFYLDNKETFLSGATKKTHLWAVACKTMLAGKTPISCEVKLRELKKKYVQVCLENQNGGTIIWNYYNLCNQAFHDDNFVKMCLSENNSDNQITVNMPVKNVVNQDGILVVKKVNSCQNKDEQVEAMLNSYIKHKTFFQKQYNTQRGLWEAIAMDLGEQDVDYWHKRFLNFKQHYIRMIYKRKESGADSINWPYMKYFDKIFGDDEDFSRKYLYSEENDTKVSIMIENDPNSWNDIEITFLVKYYFDCFNEFHDPSIPNNFLWQEVGRLIDKTPENCEKKFEDLKNEHFDKLVEGDYDLANRIPLAILFDNIIAKEVEMEVNSPEKDGPDLWKTEQIDELVQYLYENIDMLKDPVCYYVSWASLARKLKRSVTSCRKQWNDLTTLYKNILDDKKENPDMQIDWRYIDLFDRIFDYGMDSNLLDGYEKLKELGQVNKSNKVGVKKITIKDNDDKFLENGTDDEELYDERGFTKRSKKRNGDVKAFKILEFYLKNKDKFASSQQKKLALWEILARQIGITATECAHRFRNFKQVYTGYVQREINKPEMPILWPYYNLCKKVFGYRAIKSKLKNGKMDSDDAEDWSAKEIKQLINYFSRNFSNFQENIEARSKWTEIAQEISRTETSCCDKFLELRKSYRKLKTMKARNPDVKVSWKYFNMLDDIYKYGEQNCEVLENMEVDECNDDDNELKLEMQEDDDYQCIIVIPEGEDINNTQIIIQEQEQDQDQEATEITNSKQIITKWNKRSKKRLLTLYLNYLRVHKGQEINQREMWTEIASKLDEKTPISCKKMFLKLKNQHKQLNEADFKLPYSNLLEKILTFKPKFAKSNKNKDLEEINTYEDIPMSDEKVYNALNYYLQNLEDFVSPKFEQKYLWTELAKFISEPVNKIFSKINYLKQTFDSEIETPFKEILHEILTKENALREEINKDPDPITEEDSEQTWSDIETERLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMSEIRSQYRTMVRENPEELDNWKFYNLCQRIYGTGKKSSTSNKGLEDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00985050;
90% Identity
iTF_01080672;
80% Identity
-