Basic Information

Gene Symbol
-
Assembly
GCA_905332345.1
Location
CAJOBY010000028.1:2739689-2745304[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 7.1 7.4e+03 -2.4 0.0 29 45 114 130 110 131 0.83
2 6 0.36 3.8e+02 1.8 0.0 22 43 345 367 315 370 0.83
3 6 0.00051 0.53 10.9 1.0 22 44 438 466 414 468 0.65
4 6 0.13 1.3e+02 3.2 0.0 23 45 593 614 580 615 0.77
5 6 7.1e-05 0.074 13.6 0.4 3 44 666 716 664 718 0.82
6 6 0.0012 1.2 9.7 0.0 14 45 839 877 834 878 0.83

Sequence Information

Coding Sequence
ATGGAAAAAATAGTAGTTAAAACTGAGGTCCAACCGAATGGAGATATACTGCTATTTTATGTTGATGAAAATGAAGAACCAGATCTACAAGGCTTGGAGAATGAGGTTCAAAATAATGATCAAATTCTGCCAGAAACCAAGTATATCATCGAAGAAGATCTCGGTGGAGGGGAGTCAGCTGAGGAATTGGATATAGCTCAGGCATCAGAACAAGTTTCTAATGAAATCTGGCTAGAGGATGAAATAAAGCGGCTCATAGTTTTCTATCTtgataataaagaaacatttcTTGGCGGAGCTACAAAGAAAACACATTTATGGGCTGTTGCATGTAAGACAATGCTGGCTGGTAAAACTCCTATATCCTGTGAAGTTAAATTTAGAGATTTAAAAAGGAAATATGTTCAAGTATGCCTTGAAAATCAGAATGGAGCGACCATTAACTGGCATTATTATGATTTGTGTAACCAGGCATTTCACGATGatagttttgttaaaatgtgCCTCAATGAAGCTAGTTCGGATAATCAAGTTACTGTGAATATGCCTGTTAAAAATGTTGTCAACCAAGATGGTATATTAGTTGTAAAAAAAGTGAACAGTGGTCAAAACAAGGACGAGCAAGTTGAGGCAATGCTCAATTCATACATCAAACATAAGTCTTTCTTTCAGAAGCAATATAATTCACAGAGGGGCTTATGGGAAGCTATTGCTACGGATATGGGTGAAGAAGATGTAAATTATTGGCACAAACGCTTCTTAAACTTCAAACAACACTATATAAGGATGATCTGCAAGCGCAAAGAAAGTGGGGCCGGAAGTATTAATTGGCCATATATGTCATATTTTGATCAAATATTTGGTGATGATGAAGATTTcttacgtaaatatttatataatgaacaaaatgaCTCAATTGTCTCTATATCAATCGAAAGTTATGAAAATTCCTGGAACGATGTAGAAATAACGTTTTTGGTTAAGTATTATTTTGATTGCTTCAACGAATTCCATGATCCGAGCATACCGAATCAATTCTTATGGCAAGAAGTTGGCAGATTATTAGATAAAACACCAGAAAATTGTGAGAAACAATTTGAAGAACTCAAGAACAAGCATTTCGATAAACTTATAGAGGGTAACTATGATATAGCAAATAGAATACCATTAgctattatatttgataacataATAGCTAAGGAAGTAGAAATGGATGTTAACAATCACGAACAAGTTGGTCGCGATCGATGGGAGACGGAACAAATTGATGAATTAGTTCAGTATCTGTATGAAAATATAGATATGTTAAAAGATCCTGTGTGTTATTATGTTAGTTGGGCATCACTTGCAAAGAAATTGAAAAGAAGTGTAACATCTTGTCGGAAACAATGGAATGATCTGACTACGCTCTACAAGAGTattttagatgataaaaaagaaaatcctGATATGCAAATAGACTGGCGGTACATTGATTTATTCGATAGGATATTTGATTACGGTATGGATAGTAATCTATTGGACGGATATGAGAAATTAAAAGAACTCAGTCGGGTTAACAAACAGGATAAAGTGGGAGTTAAAAAGATCACCATCAAAGATAATGATGACAAATTCCTTGAAAATGGAACAGACGATGAGGAATTCTACGACGAAAGAGGTTTTACTAAACGTTCCAAAAAACGGAATGGTGATGccaaagcgttcaaaatactggaattctatttaaaaaataaagataaattcgGATCGTCACAGCAAAAGAAATTAGCGCTATGGGAAATATTGGCACGCCAAATAGGTGTTACAGCAACGGAATGCGCTCACAGATTTCGTAATTTCAAACAAGTGTACACAGGATATGTtcaaagagaaataaataagcCCGAAATGCCAATACTCTGGCCATATTACAACCTTTGCAAGAAAGTATTTGGTTATAGAGCcataaaatctaaattgaaaAACGGAAAGATGGATTCCGATGACGCAGAAGACTGGTCCGCAAAAGAAATCAAGCAATTGATCAATTATTTTTCTAGAAACTTCAGTAATTTTCAAGAAAATATTGAAGAGAGAAGCAAATGGACTGAGATAGCTCAAGAAATTAGTAGAACCGAAACGAGTTGTTGTGATAAGTTCCTTGAATTGAGGAAGTCTTATAGAAAGTTGAAGACAATGAAAGCCCGTAATCCAGATGTCAAAGTGTcctggaaatattttaatatgcttgatgatatttataaatatggtgAACAAAATTGTGAAGTTCTGGAAACTATGGAAGTTGATGAGTGCAACGATGAGGATAATGCAGTGAAGCTGGAAATGCAGGAAGATGACGATTATCAATGTATAATCGTTTTACCTGAAGGGGAAGATATTAATAACGCTCAAATCATAATTCAAGGACAAGATCAGGAGACCGCAGAAACTGAACAAACGACAAATTCGAAGCAAATCATAACTAAGTGGAATAAAAGAAGCAAAAAGCGACttctaatactttatttaaattatctaaggATGCACAAAGGACAGGAGATTAATCAAAGGGAAATGTGGACAGAGATTGCATCGAAGTTAGAAGAAAAAACGCCCATTTCTTGCAAGAAAatgttcttaaaattaaaaaatcaacacaAACAACTTAACGAAACTGACTTCAAACTTCCATATAGTGTCCTAATAGAAAAAATTCTGACTTTCAAGCCTAAATTTGCCAAATCGAACAAAAATAAGGATTTAGAAGAAATTAATACTTACGAAGACATACCAATGTCCGATGAGAAAGTTTACAATGCTCTAAATTATTACTTGCAAAATCTTGAAGACTTTGTCAGCCCAAAGTTTGAGCAGAAATATCTATGGACAGAACTAGCGAAATTTATTTCAGAGCCTGTCAACAAAATATTCAGcaaaattaattacttgaaaCAAACGTTTGATAATGAAATTGACACTCCCTTTAAGGatattttacatgaaatatTGACAAAGGAAAATGCACTCAAAGAGGAAATAAATAAGGATCCGGATCCAATAACAGAGGAGGATAGTGAACAAACATGGTCTGATATTGAAACTGAACGTCTTCTAACATGGTACTTGGCCCATTTGGACAAGTTTAAGAACCCGAAATTCGTTCGTAGCTATTTATGGATGGAGGCATCCGATATATTGAAGAAGAGTCCATTAGTTTGTTCAAAGAAAATGTCCGAAATACGATCCCAGTACAGGACAATGGTTAGAGAAAATCCAGATGAATTAGATAGTTGGAAATTTTACAATCTGTGCCAGAGAATCTATGGAACTGGAAAGAAAAGCTCGAATAGTAATAGAGGTCTAgaagatatataa
Protein Sequence
MEKIVVKTEVQPNGDILLFYVDENEEPDLQGLENEVQNNDQILPETKYIIEEDLGGGESAEELDIAQASEQVSNEIWLEDEIKRLIVFYLDNKETFLGGATKKTHLWAVACKTMLAGKTPISCEVKFRDLKRKYVQVCLENQNGATINWHYYDLCNQAFHDDSFVKMCLNEASSDNQVTVNMPVKNVVNQDGILVVKKVNSGQNKDEQVEAMLNSYIKHKSFFQKQYNSQRGLWEAIATDMGEEDVNYWHKRFLNFKQHYIRMICKRKESGAGSINWPYMSYFDQIFGDDEDFLRKYLYNEQNDSIVSISIESYENSWNDVEITFLVKYYFDCFNEFHDPSIPNQFLWQEVGRLLDKTPENCEKQFEELKNKHFDKLIEGNYDIANRIPLAIIFDNIIAKEVEMDVNNHEQVGRDRWETEQIDELVQYLYENIDMLKDPVCYYVSWASLAKKLKRSVTSCRKQWNDLTTLYKSILDDKKENPDMQIDWRYIDLFDRIFDYGMDSNLLDGYEKLKELSRVNKQDKVGVKKITIKDNDDKFLENGTDDEEFYDERGFTKRSKKRNGDAKAFKILEFYLKNKDKFGSSQQKKLALWEILARQIGVTATECAHRFRNFKQVYTGYVQREINKPEMPILWPYYNLCKKVFGYRAIKSKLKNGKMDSDDAEDWSAKEIKQLINYFSRNFSNFQENIEERSKWTEIAQEISRTETSCCDKFLELRKSYRKLKTMKARNPDVKVSWKYFNMLDDIYKYGEQNCEVLETMEVDECNDEDNAVKLEMQEDDDYQCIIVLPEGEDINNAQIIIQGQDQETAETEQTTNSKQIITKWNKRSKKRLLILYLNYLRMHKGQEINQREMWTEIASKLEEKTPISCKKMFLKLKNQHKQLNETDFKLPYSVLIEKILTFKPKFAKSNKNKDLEEINTYEDIPMSDEKVYNALNYYLQNLEDFVSPKFEQKYLWTELAKFISEPVNKIFSKINYLKQTFDNEIDTPFKDILHEILTKENALKEEINKDPDPITEEDSEQTWSDIETERLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMSEIRSQYRTMVRENPDELDSWKFYNLCQRIYGTGKKSSNSNRGLEDI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00985050;
90% Identity
iTF_01080672;
80% Identity
-