Basic Information

Insect: Nymphalis c-album
Gene Symbol: -
Assembly: GCA_905332345.1
Location: CAJOBY010000008.1:9198388-9206943[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0046 0.35 11.9 1.0 3 23 579 600 578 600 0.96

2 22 0.044 3.4 8.8 0.6 1 22 981 1002 981 1002 0.95

3 22 6.4 4.9e+02 2.0 0.3 1 22 1044 1065 1044 1067 0.82

4 22 1.2 93 4.2 0.8 1 14 1076 1089 1076 1097 0.79

5 22 0.0057 0.44 11.6 0.1 3 23 1147 1168 1145 1168 0.96

6 22 0.0097 0.73 10.9 4.4 1 23 1174 1197 1174 1197 0.95

7 22 0.12 9.1 7.4 0.0 1 23 1223 1246 1223 1246 0.90

8 22 0.018 1.4 10.0 3.4 1 23 1251 1273 1251 1273 0.97

9 22 0.029 2.2 9.3 0.4 1 23 1279 1302 1279 1302 0.95

10 22 0.0076 0.58 11.2 1.6 1 23 1314 1336 1314 1336 0.97

11 22 0.0014 0.11 13.5 4.0 1 23 1379 1402 1379 1402 0.96

12 22 0.0041 0.31 12.0 1.6 1 23 1462 1485 1462 1485 0.96

13 22 0.0011 0.08 13.9 2.1 2 23 1509 1531 1508 1531 0.95

14 22 0.083 6.3 7.9 0.1 2 23 1537 1559 1536 1559 0.93

15 22 0.0095 0.72 10.9 0.2 1 21 1603 1623 1603 1624 0.95

16 22 0.0012 0.089 13.7 0.6 1 23 1634 1656 1634 1656 0.93

17 22 0.00025 0.019 15.8 0.4 2 23 1747 1769 1747 1769 0.93

18 22 1.7e-07 1.3e-05 25.8 1.1 3 23 1776 1796 1775 1796 0.98

19 22 0.044 3.3 8.8 0.1 3 23 1814 1834 1813 1835 0.94

20 22 0.12 8.8 7.5 0.0 1 23 1856 1878 1856 1878 0.97

21 22 0.026 2 9.5 0.6 1 23 1884 1907 1884 1907 0.95

22 22 0.0003 0.023 15.6 0.7 1 23 1915 1938 1915 1938 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0046	0.35	11.9	1.0	3	23	579	600	578	600	0.96
2	22	0.044	3.4	8.8	0.6	1	22	981	1002	981	1002	0.95
3	22	6.4	4.9e+02	2.0	0.3	1	22	1044	1065	1044	1067	0.82
4	22	1.2	93	4.2	0.8	1	14	1076	1089	1076	1097	0.79
5	22	0.0057	0.44	11.6	0.1	3	23	1147	1168	1145	1168	0.96
6	22	0.0097	0.73	10.9	4.4	1	23	1174	1197	1174	1197	0.95
7	22	0.12	9.1	7.4	0.0	1	23	1223	1246	1223	1246	0.90
8	22	0.018	1.4	10.0	3.4	1	23	1251	1273	1251	1273	0.97
9	22	0.029	2.2	9.3	0.4	1	23	1279	1302	1279	1302	0.95
10	22	0.0076	0.58	11.2	1.6	1	23	1314	1336	1314	1336	0.97
11	22	0.0014	0.11	13.5	4.0	1	23	1379	1402	1379	1402	0.96
12	22	0.0041	0.31	12.0	1.6	1	23	1462	1485	1462	1485	0.96
13	22	0.0011	0.08	13.9	2.1	2	23	1509	1531	1508	1531	0.95
14	22	0.083	6.3	7.9	0.1	2	23	1537	1559	1536	1559	0.93
15	22	0.0095	0.72	10.9	0.2	1	21	1603	1623	1603	1624	0.95
16	22	0.0012	0.089	13.7	0.6	1	23	1634	1656	1634	1656	0.93
17	22	0.00025	0.019	15.8	0.4	2	23	1747	1769	1747	1769	0.93
18	22	1.7e-07	1.3e-05	25.8	1.1	3	23	1776	1796	1775	1796	0.98
19	22	0.044	3.3	8.8	0.1	3	23	1814	1834	1813	1835	0.94
20	22	0.12	8.8	7.5	0.0	1	23	1856	1878	1856	1878	0.97
21	22	0.026	2	9.5	0.6	1	23	1884	1907	1884	1907	0.95
22	22	0.0003	0.023	15.6	0.7	1	23	1915	1938	1915	1938	0.96

Sequence Information

Coding Sequence: atgaaTGTGAATTATGATAGTGTTTGTAGACTGTGCTTGTCATCTCGATGCGAATTACTACCGATATTTCCTACCACCAGTTCAGATGACACGGAACCTCCTGTCCTCGCCTCGAAAATTAAAGATTGCGTGTCAGTGCAGATAAGCGAAAATGACGACCTGCCAACTAATGTCTGCAGGAAATGCATGGACAATGTTAATAACTGGCACATATTCAAGACTGTGTGTGAAAGGACACAAAACAAGTTACAGTCTCTTATGAATAAGGAGAGCAACCAACTAGAAGAGGtgaaaataaaaagtgaacCCTTATCAGATGAAGCTTATGATGATGGAGTGGTTATTGATGGATCATATCCTGATAGTGAGaatGCCTCATCAAGTAGATTGCAACCTGAAGGGCCACCTATTTTGGCTTCACTGGGGCTCACACCGAGAAGTGATAAGAAAAATATAGATCCTCGGTTGGATTGGCATCGAGTTCATGCCATACTGGATATGGTCCAAGAAGATGAGGTCATTGACTCTCTTCAGTCTATGGAGGAATGTGATGTAATCCATCAGTCTGATCATGATTCTGACTCCGAGACGGAATTGAATAATGAGAATGTGCTTGATGACTTCATTGATTGTAAAAATGGATACTTATGTAGGAACAGGAAAATGATATCGAAGAATCCTAAAATATCATCTGTAGAAGCTTTGGCTAAGATCAAACATGTTATCAATTTACGTAAACGTAATATTGTTCCATCGAAAAATTGCCCTCAACCTAAAGCGGCCTGGCAGTTGCTTTTTAGTGATGATTTATTGGACTTGATTGTTACTTcaacaaatgaaaaaattattaaaaataataacaacatatcGGACACTACAAGTTTGATTGAAATTAGGACACTAATTGGAATACTGTATTATCATGGTATAATGCGACCTACACATCAAAAATACAGTGATCTCTGGCATAATGAGTATGGAGCACCTTGCGTTCGAAATGCAATGACATTAGAAAGATTTAAATTCCTTCTGAAAAACATGAGTTTTAATAATGAGGATGATGACAGCATTGTGCAGTTTGATGTTATGAAGCGAATGAGGaaagtttttgaaatatttgctttaaactGTAGAACTTCATTGGATGTTGGTAATTTAGTTGTTATTGATGATGTCATATTACCACTGTATGGCCCTTGCCCGTTTCGGTATAATATAGAgaagaaaagttttaaaagtgGACTTAAACTTGTTTTATTGATAGATCCAGTCAATTTTTATGTGACAAACTTAGATGTGATTACAGATCCTTACTTTGGATGTGATGAAATAGCCACAAAATTGGTTCAACATTTGGCTGGCACGGGACGAACAGTTATAATGGACAGTTGGTTCACATCCAATTCTCTGATGAAACGACTGAAAAATGAGTATAATTTGTATAGTATCGGTGCAGTTAACCCGAATAGTGAAATTATACCTCCATATTTCTTATCCCATTATAGAAAAGAAAGAGCATTTATCAATGGATTCTTAGATAAAGATATGTGTCTATGCTCGTATgGAATGGAGAGCGAGAAAGATGAAGATTATGAAGACGAGGAAGAAATGATGCAGCCACAACAAACATTCACACACATGCCCAACATGCCTGAAGTTTCGATTACTGTCATGCGCCCATCAGGAGAAACCCTTCATGCTCGCCAAGGTATTCAGCAGCTTGCCTCAAAGGATTGCTTAGTGTGCGGCCGATCCTACAGGTATTCTCACAATGCTCGGCGACATGAGCTTACTGCTCATAATTTCGATAGATACACAAACAAGATTGGTACAAAGAAATCTCACGCTCACATGCAACCAAAATTCAGGCCGAACCCATTTAACCCTAAGGCTAGATTAATGCCAAATCCTATAAGCCACAAAATGCAATTTCATTCTAAATCAATGCCACCTAAAATGATGCCTCAGAAGATTGTTGCACCACCAAAGCCTATACCGATAAGAACAGGGAAAAATTCCCAAAACAATTTACCATATCCCCTTCGCATAAAGGCTCTTAAAGATTtgcaaattaagaaaaaagaacCTCAAATTTTAAAGACGTTATTAACTGCAAAGCCGGAAGTCTTAGTATCTGAAcctgaaataattaattcgGGACCGGAAAGTCCAGAAACATTAATTTCGGAGCCAGAGATTGCTTCATTTCAAGTGGAAGCTATTTTATCAGAGCCAGATGGTTATGTTAATCAACATGAAGATGACGAAATTGACGATGAAAACAATCAAGGACAGAATTATGATACTGTTGACATGGATTCAGAAAATGAGATCGAGATAGCTCGCCAGCAAGAGAATGACATCCAAGGTGACGAAAATCACGAAGTTAATGATGCCGAATATAATACTCATGAAGATGAAAATAACATGGTGGAGGTAAATGATGATAACGAAAAAGAGAATCGTGAAGATAATGGCGAGAGTCACGATAATATggatatagaaaataatattgcgGAAGAAGCCGACGCAGACGACGATAATGCCAAAGAAATTGACGATGAAAACgttgaaaaagaaaatgatgAACAAAACATAAATCATGAAGAGAATGATGACGATGACGATTTGCCACCTATGAGTATAGCACCCGTTGTCGAGATTAACGAGGATTTGCAAACAAATTGTTATAATAGTGATGGTAATGAAGAACTTGATGAAACCGTAGATCCAAATGATGCCGTTGATGGTGATGAAGGTGAAAAAGATATTGATCCCGATAAAGTTTATATTACGAAAACGCAAAGagattttattctaaaatatcgtgatattatacaacaaattaATACCAAACGGTGCATTTGCTGTAACAAAGAACACCCTCGTCGAAAAGCAGTTATACAACATTTACAGAAAAATGGACATAAAGTTCCTAAGCATACATGTTACAATTGCGTTGTCACTTTTACACATATAGGAGCTCTGCTCAGTCACATGAGATCTAATACTTGTACTGATCTttggaaaattatatataatgaaaatggtATCACTGATGATATAGTTTTAGAAGTTGAACCTAAAGACGTCAAAGTTCAATACAAAGATATACTTAATGCTAGATCTTACGCATGTAAATTGTGCCCAGCGAAATTTCAATTAAAGCAATTCATTATGAAGCATGTTCTTGATGTACATGAAGACGGTCAATCTCGTTTCCCTCATTCTTGCGTGCATTGTGGTCTACGATTTAAAGAGAAAAGTATAGGAAAGAGACACATACGAAATGGAGATTGCACAGTCGAAATATGCTGTGAGTTATGTTCAGAAAAATTTTTGAGCTTGCAAGAATTCAATGACCATGCTGTAGCTATACATGCAGGCAGCTTTGATCCTGATAATCAGAGCAAGTGTGTCGACGGTCGACCTACGGATTGTCCTATATGTGGTAAGAAGAATAGTAGTTACCCGAATTtggttaaacatttaaaaataatacataatgagGAAAAGCCTCATCACTGCCAACATTGTGATGCTAAATTCGAGCAAACTGCTGATCTTAACAAACACATCTATATGGAACATTCTGATAGATCATTAGGTATGCATACTAATGAACCTGATATGACTCTTGTAAAAGAGGAAGCTGAGGAGTATCACTATTCTTGCACGGAATGTAATGCGATATTTGAAACCGTCGATGCTTGGACGGATCATCAGGTGGCGGAACACAATCAAGTCGCTCATCATTGCGACCAATGCGAAAAGAAATTCTTGCGTCCATCAGAACTTGcggaacataaaaatacacaCTTGCGAGTTAAATTCTATCCTTGTAGTCTCTGTACGAACTCATACAGTACTCCTCAAAAGTTATCCGAGCATGTTCAGCAATCCCATCCGGGAGCGAACACGCGGGGTGGTGAAACTGAATTTTTCTGCGACTTGTGTATACGATCGTTTAAAAGTCGCCAAGCATATTCTAATCATATGCGTATTCATTCCAAAGTGCCTACCACTAATAGAAAGCCTGGAGAAACGAAAGGTTTCGGACCTCAAATCATCGGAAAACCGATTCGTCATTTCTCAATGCAACCTGGCTTTAGTCCTTATGTTCCTAACGCACCTTATTGTTGTGATATTTGCGGTAAAGGATTCATgcacaagaaaaatatatggaaaCACAAAAAGGTGCTGCATGCGGATCTTCTTAATGATAGAAACGATAGTGAGGAGAACACTATGCAAGCGTCCACCGAGGAAGATGATTACAATGTCGATGAAAACGGTGCGATTTTGTCGACTCCACAAtttgatagttttaatttcacaaATCTTTCAAACAATATGCAACAGACCTCGCAAGACGCTTTGCCATATTCCTGTGAATTATGTTACAAAAGGTTTCCGCTTCGAACTAGTTTATGGAAGCACAAACGCGCTAAACATGGAATTATAAATGCCAGTGCAAGTGGTGCTTCTGAAACCCAAACACAATCTTCGAATGAAGGCAGATCGAGCTGtactatttgtaaaataactttttcaGACAAAAAATCGTACTATCGTCATAGAAAAAATGTCCACAAGTCTACCGTTCAAATGTGTAAAATATGCGGAAAACCGCTTAATTCGACCTTAGAACTTTATGAACATCTGAAAGCGGCACATGCCCGAGAGCTTCTGGGTTATAATGCGAATCAAAGTTCAAGCAAATCACAAGAACTGAATCAAGAATTGGATATAGAATACGATGGTGATCAAGATTCAGTCGATCCCAGCGTCGACTACCAAGCGCGCTATCCCTGCGACACGTGTGGAAAACAGTTTGTCGGATTATTGGCTCTACAAAACCACCAATGTATCAACCAGATACAGAATCAACCTCAAACGTTCGATTGTGAAATATGTCACAAGAGTTATACTTCTATTGCTGCCTTAAAGAGCCACCGAGGCTGGCACTTGCGTTCTCCTGATGGTAAAGCCGCAGCAAATAATTCTGGACTGTGGATGCCTCAAAACAAAGTAACTAGTAAAGTGAGTAAACACGAAGTAGTGGATGCTCCTCCAGTTCCTCCTAAAACATCAACTTCGACCCCAGCCTCGTTGGCTAAAAGGAGATTGCCACCAGAAGTAGAAGTGACTGTCGTAAATCCGAATAAAAAATTGAGATCAGACGATTCTATCGAAATGGATCATCAGAACAATTTATCAGGGGGTGCCGAAGACAGATACTGTAATCTTTGTGATAAAGAATTTACAAAGCGAGCTGCATACCAGCGCCATATGGACGAAGTTCATCAGCCGAACTCAGTGTTTTGCCCCGTTTGCGACAAGAGCTTTACGCGGAAATCTACATTGATCGTGCACATGAAGAAGCACTACGAGGGTGGGGAAGGAAGTTCTACACAAATGGAGGAAGACGTACAAGCGTGCGAAGTCTGTGGTGCCCAATTCGACAGTGTGAAGGCTCTAAATGCACATCGGGCTTTGCATCACGGCGAAGATTCCGCTGAGTCCGAGGACGACGGCGAAGTGATACCCGCGCCCCCCGGCGAGTTCACGTGCGGACAGTGCGGCGACGGCGTGGCCACCCCACGCGACTTGATCGCTCACCGAACGATGCACGCCACTCCCACTAAATTCTTTTGTAATATCTGCAAGGTTTATTTTGCCCGAGCTCTTGATTTGTCCTCCCACACACGAGCAAGACACTCCGACAACGAGAAAGTGTTCTTCCCGTGTGCTATGTGCGACCGATTCTATATGAACAAGAAGAGTTTGCAGAGGCACATCGAAATGTCGCACTGA
Protein Sequence: MNVNYDSVCRLCLSSRCELLPIFPTTSSDDTEPPVLASKIKDCVSVQISENDDLPTNVCRKCMDNVNNWHIFKTVCERTQNKLQSLMNKESNQLEEVKIKSEPLSDEAYDDGVVIDGSYPDSENASSSRLQPEGPPILASLGLTPRSDKKNIDPRLDWHRVHAILDMVQEDEVIDSLQSMEECDVIHQSDHDSDSETELNNENVLDDFIDCKNGYLCRNRKMISKNPKISSVEALAKIKHVINLRKRNIVPSKNCPQPKAAWQLLFSDDLLDLIVTSTNEKIIKNNNNISDTTSLIEIRTLIGILYYHGIMRPTHQKYSDLWHNEYGAPCVRNAMTLERFKFLLKNMSFNNEDDDSIVQFDVMKRMRKVFEIFALNCRTSLDVGNLVVIDDVILPLYGPCPFRYNIEKKSFKSGLKLVLLIDPVNFYVTNLDVITDPYFGCDEIATKLVQHLAGTGRTVIMDSWFTSNSLMKRLKNEYNLYSIGAVNPNSEIIPPYFLSHYRKERAFINGFLDKDMCLCSYGMESEKDEDYEDEEEMMQPQQTFTHMPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHNFDRYTNKIGTKKSHAHMQPKFRPNPFNPKARLMPNPISHKMQFHSKSMPPKMMPQKIVAPPKPIPIRTGKNSQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDGYVNQHEDDEIDDENNQGQNYDTVDMDSENEIEIARQQENDIQGDENHEVNDAEYNTHEDENNMVEVNDDNEKENREDNGESHDNMDIENNIAEEADADDDNAKEIDDENVEKENDEQNINHEENDDDDDLPPMSIAPVVEINEDLQTNCYNSDGNEELDETVDPNDAVDGDEGEKDIDPDKVYITKTQRDFILKYRDIIQQINTKRCICCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEVEPKDVKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRFPHSCVHCGLRFKEKSIGKRHIRNGDCTVEICCELCSEKFLSLQEFNDHAVAIHAGSFDPDNQSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHHCQHCDAKFEQTADLNKHIYMEHSDRSLGMHTNEPDMTLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSLCTNSYSTPQKLSEHVQQSHPGANTRGGETEFFCDLCIRSFKSRQAYSNHMRIHSKVPTTNRKPGETKGFGPQIIGKPIRHFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQASTEEDDYNVDENGAILSTPQFDSFNFTNLSNNMQQTSQDALPYSCELCYKRFPLRTSLWKHKRAKHGIINASASGASETQTQSSNEGRSSCTICKITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQSSSKSQELNQELDIEYDGDQDSVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQNQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVVDAPPVPPKTSTSTPASLAKRRLPPEVEVTVVNPNKKLRSDDSIEMDHQNNLSGGAEDRYCNLCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSTQMEEDVQACEVCGAQFDSVKALNAHRALHHGEDSAESEDDGEVIPAPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMSH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078396; iTF_01508250; iTF_01506540; iTF_01507421;
90% Identity: iTF_01078396;
80% Identity: -