Basic Information

Insect: Vanessa tameamea
Gene Symbol: -
Assembly: GCA_037043105.1
Location: CM073283.1:9563196-9573159[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0047 0.35 11.9 1.0 3 23 579 600 578 600 0.96

2 22 0.045 3.3 8.8 0.6 1 22 980 1001 980 1001 0.95

3 22 6.6 4.8e+02 2.0 0.3 1 22 1043 1064 1043 1066 0.82

4 22 1.3 92 4.2 0.8 1 14 1075 1088 1075 1096 0.79

5 22 0.0059 0.43 11.6 0.1 3 23 1146 1167 1144 1167 0.96

6 22 0.0099 0.72 10.9 4.4 1 23 1173 1196 1173 1196 0.95

7 22 0.12 9 7.4 0.0 1 23 1222 1245 1222 1245 0.90

8 22 0.018 1.3 10.0 3.4 1 23 1250 1272 1250 1272 0.97

9 22 0.0093 0.68 10.9 0.2 1 23 1278 1301 1278 1301 0.95

10 22 0.0077 0.57 11.2 1.6 1 23 1313 1335 1313 1335 0.97

11 22 0.0014 0.1 13.5 4.0 1 23 1378 1401 1378 1401 0.96

12 22 0.0042 0.31 12.0 1.6 1 23 1461 1484 1461 1484 0.96

13 22 0.0011 0.079 13.9 2.1 2 23 1508 1530 1507 1530 0.95

14 22 0.085 6.2 7.9 0.1 2 23 1536 1558 1535 1558 0.93

15 22 0.0097 0.71 10.9 0.2 1 21 1602 1622 1602 1623 0.95

16 22 0.0012 0.088 13.7 0.6 1 23 1633 1655 1633 1655 0.93

17 22 0.00026 0.019 15.8 0.4 2 23 1746 1768 1746 1768 0.93

18 22 1.7e-07 1.3e-05 25.8 1.1 3 23 1775 1795 1774 1795 0.98

19 22 0.047 3.5 8.7 0.2 3 23 1813 1833 1812 1834 0.94

20 22 0.12 8.6 7.5 0.0 1 23 1855 1877 1855 1877 0.97

21 22 0.027 2 9.5 0.6 1 23 1883 1906 1883 1906 0.95

22 22 0.00025 0.018 15.9 0.4 1 23 1914 1937 1914 1937 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0047	0.35	11.9	1.0	3	23	579	600	578	600	0.96
2	22	0.045	3.3	8.8	0.6	1	22	980	1001	980	1001	0.95
3	22	6.6	4.8e+02	2.0	0.3	1	22	1043	1064	1043	1066	0.82
4	22	1.3	92	4.2	0.8	1	14	1075	1088	1075	1096	0.79
5	22	0.0059	0.43	11.6	0.1	3	23	1146	1167	1144	1167	0.96
6	22	0.0099	0.72	10.9	4.4	1	23	1173	1196	1173	1196	0.95
7	22	0.12	9	7.4	0.0	1	23	1222	1245	1222	1245	0.90
8	22	0.018	1.3	10.0	3.4	1	23	1250	1272	1250	1272	0.97
9	22	0.0093	0.68	10.9	0.2	1	23	1278	1301	1278	1301	0.95
10	22	0.0077	0.57	11.2	1.6	1	23	1313	1335	1313	1335	0.97
11	22	0.0014	0.1	13.5	4.0	1	23	1378	1401	1378	1401	0.96
12	22	0.0042	0.31	12.0	1.6	1	23	1461	1484	1461	1484	0.96
13	22	0.0011	0.079	13.9	2.1	2	23	1508	1530	1507	1530	0.95
14	22	0.085	6.2	7.9	0.1	2	23	1536	1558	1535	1558	0.93
15	22	0.0097	0.71	10.9	0.2	1	21	1602	1622	1602	1623	0.95
16	22	0.0012	0.088	13.7	0.6	1	23	1633	1655	1633	1655	0.93
17	22	0.00026	0.019	15.8	0.4	2	23	1746	1768	1746	1768	0.93
18	22	1.7e-07	1.3e-05	25.8	1.1	3	23	1775	1795	1774	1795	0.98
19	22	0.047	3.5	8.7	0.2	3	23	1813	1833	1812	1834	0.94
20	22	0.12	8.6	7.5	0.0	1	23	1855	1877	1855	1877	0.97
21	22	0.027	2	9.5	0.6	1	23	1883	1906	1883	1906	0.95
22	22	0.00025	0.018	15.9	0.4	1	23	1914	1937	1914	1937	0.96

Sequence Information

Coding Sequence: atgaatGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGATGCGAATTACTACCGATATTtcctaccaccagttcggatgACTCGGAACCTCCTGTCCTCGCTTCGAAAATTAAAGATTGCGTGTCAGTGCAGATAAGCGAAAATGACGACCTGCCAACTAATGTCTGCAGGAAATGCATGGACAATGTTAATAACTGGCACATATTTAAGACTGTTTGTGAAAGGACACAAAACAAGTTACAGTCTCTTATAAATAAGGAGAGCAACCAACTAGAAGAGGTGAAAATTAAAAGTGAACCCTTATCTGATGAAGCATATGATGATGGAGTGGTTATTGATGGATCATACCCTGATAGTGAGaatGCCTCATCGAGTAGAGTACAACCTGAAGGACCACCTATTTTGGCATCGCTGGGGCTCACACCGAGAAGTGATAAGAAAAATATAGATCCTCGGATGGATTGGCATCGAGTTCATGCCATACTGGATATGGTCCAAGAAGATGAGGTCATTGACTCTCTTCAATCTATGGAAGAATGTGATGTAATTCACCAGTCTGACCATGATTCCGACTCTGAGGCAGAATTGAATAATGACAATGTGCTTGATGACTTCATTGATTGTAAAAATGGATATTTATGCAGGAACAGGAAAATAGTATCGAAAAACCCAAAAATATCATCTGTGGAAGCTTTGGCCAAGATAAAACAAGCCATCAATTTACGCAAACGTAATATTGTTCCATCTAAAAATTGCCCTCAACCTAAAGCAGCTTGGCAGATGATCTTTACTGACGATTTGTTAGAGTTAATTGTTACTTCgacaaatgaaaaaattattaaaaataataacaatatatcagAGACTACAACTGTGATTGAAATCAGGACACTAATTGGAATACTGTATTTTCATGGTATAATGCGACCTACACATCAAAAATACAGTGACCTCTGGCATAATGAGTATGGAGCACCTTGTGTTCGAAATGCAATGACATTAGAAAGATTTAAATTCCTTCTGAAGAACATGAGTTTTGATAATGAGGATGATGACAGCATTGTGCAGTTTGATGTTATGAAGCGAATGAGgaaagtttttgaaatatttgctCTGAATTGTAGAACTTCATTGGATGTTGGTAATTTAGTTGTTATTGATGATGTCATATTACCTGTTTATGGCCCTTGCCCGTTCCGATATAATATAGCgaagaaaagttttaaaaatggaCTTAAACTTGTATTATTGATAGATCCAGTAACTTTTTATGTGACAAACTTAGATGTGATTACAGATCCTTACTTTGGATGTGATGAAATTGCCACAAAATTGGTACAACATTTGGCTGGCACGGGACGGACAGTTATAATGGACAGTTGGTTCACATCCAATTCTCTGATGAATCGACTGAAGAATGAGTATAAATTGTACAGTATCGGAGCAGTCAACccaaataatgaaattatacctCCATTTTTCTTATCACATTATAGAAAAGAAAGAACATTTATCAATGGATTCTTAGATAAAGATATGTGTCTATGTTCATATGGAATGGAGAGTGAGAAAGATGAAGAATATGAAGACGAGGAAGAAATGATGGAGCAGCAGCAAACATTTACGCACATGCCTAATATGCCTGAAGTTTCCATTACTGTCATGCGCCCATCAGGAGAAACTCTTCATGCCCGCCAAGGTATTCAGCAGCTTGCATCTAAGGATTGTCTAGTGTGCGGCCGATCCTATAGGTACTCTCACAATGCTCGACGACATGAACTTACAGCTCATGATTTCGATAGATACACCAACAAGATTAATACAAAGAAATCTCACGCTCATATGCAACCTAAATTCAGGCCGAATCCATTCAATCCTAAGGCCAGATTAATGCCAAATCCAATAAGCCACAAAATGCAATTTCACTCGAAATCTATGCCACCTAAAATGATGCCTCAGAAGATCATTGCACCACCAAAGCCTATACCAATAAGAACAGGGAAAAATTCCCAAAACAACTTACCATATCCACTTCGCATTAAGGCTCTTAAAGATTTGcaaattaagaaaaaagaaCCTCAAATTTTAAAGACATTATTAACTGCCAAGCCAGAAGTTCTAGTTTCGGAAcctgaaataattaattcggGGCCCGAAAGTCCAGAAACATTAATTTCGGAGCCAGAAATTGCCTCATTTCAAGTAGAAGCAATTTTATCAGAGCCAGATGGTTTTGTTAATCAACATGAAGATGACGAAATTGATGATGAAAACAATCAAGGACAAAATTATGACACCGTCGATATGGATTCGGAAAATGAGATTGAGATAGCTCGTCAGCAAGAAAATGATATCCAAGGCGATGAAAATCACGAAGTTCACGATGAAGAAAATACTCAAGAAGATGAGAATAACATGGAGGAGACAAATGACGATAATGAAAAAGAGAACCGTGAAGATAATGGCGAGAGTCAAGATAATATGGAcgtagaaaataatattgaggAAGAAGCCGACGCAGACGATGATAATGCCAAAGAAAATGATGAAGAAAATGGAGAAAAAGATAATGATGAACAAATCATCAATCATGAAGAAAATGAGGATGACGACGATTTGCCACCTATGAGTATAGCACCCGTTGTCGAAATTAACGAGGATTTGCAAACTAATTCTTATAATAGTGATGGAAATGAAGAACTTGATGAAACTGTAGATCCAAATGATGCAGTTGATGGCGATGAAGGCGAAAAAGATATTGATCCcgataaagtttatattacaaaaacgcAAAGAGATTTTATTCTCAAATATCGTGatattatacaacaaattaaTACAAAGCGCTGCATTTGCTGTAACAAAGAACACCCTCGACGAAAAGCAGTTATACAACATTTACAGAAAAATGGACATAAAGTTCCTAAGCATACATGCTACAATTGTGTGGTTACTTTTACACATATTGGGGCTTTGCTTAGTCATATGAGATCAAATACGTGTACTGATctttggaaaataatatataacgaaaatGGTATCACTGATGACATAGTTTTAGAAGTTGAACCTAAAGACGTCAAAGTTCAATACAAAGATATACTTAATGCTAGATCTTACGCATGTAAATTATGCCCtgcaaaatttcaattaaaacaattcattaTGAAGCATGTTCTTGATGTACATGAAGACGGTCAATCTCGTTTTCCTCATTCCTGCGTACATTGTGGTTTacgatttaaagaaaaaagtataGGCAAGAGACACATACGTAATGGAGATTGCACAGTTGAAATCTGTTGTGAATTATGTTCCGAAAAGTTTTTGAGCTTGCAAGAATTTAATGACCATGCTGTAGCTATACATGCAGGCAGTTTTGATCCTGATAATCAGAGCAAGTGTGTCGACGGTCGACCTACAGATTGTCCAATATGTGGAAAGAAGAATAGTAGTTACCCAAATTtggttaaacatttaaaaataatacataatgagGAAAAACCTCATCACTGTCAGCATTGTGACGCTAAATTCGAGCAAACTGCTGATCTTAACAAGCATATTTATATGGAACATTCTGATAGATCTTTAGGTATGCATACTAATGAACCTGATATATCTCTTGTAAAAGAGGAAGCTGAGGAGTATCACTATTCTTGTACAGAATGTAATGCTATTTTTGAAACCGTCGATGCTTGGACGGATCATCAGGTTGCGGAACACAATCAGGTCGCTCATCACTGCGACCAATGCGAAAAAAAATTCTTGCGTCCATCAGAACTTGCAGAACATAAGAATACACATTTGCGAGTTAAATTCTATCCTTGTAGCATCTGTTCAAACTCGTACAGTACTCCGCAAAAGTTATCTGAACATGTCCAACAAGCCCACCCAGGAGCGAACACACGGGGTGGTGAATCTGAATTTTTCTGCGACTTATGTATCCGATCATTTAAAAGCCGTCAAGCATATTCTAATCATATGCGTATTCATTCCAAAGTGCCTACCACTAATAGAAAACCGGGAGAAACTAAAGGTTTCGGACCTCAAATCATCGGAAAACCTATTCGTCATTTCTCTATGCAACCTGGTTTTAGTCCTTATGTTCCAAACGCACCTTATTGTTGTGATATTTGCGGTAAAGGATTCATgcacaagaaaaatatatggaaaCATAAAAAGGTGCTGCATGCGGATCTACTTAATGATAGGAACGACAGTGAAGAGAACACTATGCAAGCTTCTACCGAAGAAGATGATTATAATGTTGATGAAAACGGTGCGATTTTGTCGACTCCACAATTTGATAGTTTTAATTTCACAAATCTAACTAACAATATGCAACAGACATCACAAGATGCTTTGCCATACTCCTGcgaattatgttataaaagatTTCCGCTTAGAACTAGTTTATGGAAGCACAAACGTGCTAAACATGGAATTATAAATGCCAGTGCAAGTGGTGCTTCTGAAACCCAAACACAGTCCTCGAATGAAGGCAGATCGAGTTGTactatttgtaaaattactttttcagacaaaaaatcatattatcgTCATAGAAAAAATGTCCACAAGTCAACCGTTCAAATGTGTAAAATATGTGGAAAACCTCTTAACTCAACTTTAGAACTTTATGAACATCTGAAAGCGGCACATGCTCGAGAACTTCTGGGTTATAATGCGAATCAAAGCTCCAGCAAATCACAAGACATGAATCAAGAAATGGACATAGAATACGACGGTGATCAAGATTCAGTCGATCCTAGTGTTGATTATCAAGCCCGCTATCCCTGCGACACGTGTGGGAAACAATTTGTCGGATTATTGGCTCTACAAAATCATCAGTGTATTAACCAGATACAAAACCAGCCTCAAACGTTTGATTGTGAAATATGTCATAAGAGTTATACTTCTATTGCTGCCTTAAAAAGCCACCGAGGCTGGCATCTGCGTTCCCCTGATGGTAAAGCCGCAGCAAATAATTCTGGACTTTGGATGCCTCAAAATAAAGTAACTAGTAAAGTTAGTAAACATGAAGTAGTGGATGCTGTTCCTGTTCCTCCTAAAACATCAACCTCGACGCCAGCCACGTTGGCCAAAAGGAGATTGCCTCCAGAAGTAGAAGTGACAGTCGTGAATCCTAATAAAAAATTGAGATCAGATGATTCTATCGAAATGGATCACCAGAACAATTTATCAGGGGGAGCCGAAGACAGATACTGCAATCTTTGCGATAAAGAATTTACAAAGCGAGCGGCATACCAGCGTCATATGGACGAAGTTCATCAGCCGAACTCGGTATTTTGTCCCGTCTGCGACAAGAGCTTTACGCGGAAATCTACTCTGATCGTGCATATGAAGAAACACTACGAGGGCGGAGAAGGAAGTTCTACACAAATGGAGGAAGACGTACAAGCGTGCGAAGTGTGCGGCGCTCAATTCGATACTGTAAAGGCTTTAAATTCACATCGGGCTTTACATCACGGCGAAGAATCCGCGGAGTCCGAGGACGACGGTGGAGCCATAGCTGCGCCCCCCGGCGAGTTCACGTGCGGCCAGTGCGGCGACGGCGTGGCCACTCCGCGCGATCTGATAGCTCACCGAACGATGCACGCGACTCctactaaatttttttgtaatatctgCAAGGTTTACTTTGCCCGAGCACTTGATTTGTCCTCCCACACCCGGGCCAGACACTCGGACAACGAGAAGGTATTCTTCCCTTGTGCTATGTGCGACCGGTTCTATATGAACAAGAAGAGTTTGCAAAGGCACATTGAAATGGCGCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRCELLPIFPTTSSDDSEPPVLASKIKDCVSVQISENDDLPTNVCRKCMDNVNNWHIFKTVCERTQNKLQSLINKESNQLEEVKIKSEPLSDEAYDDGVVIDGSYPDSENASSSRVQPEGPPILASLGLTPRSDKKNIDPRMDWHRVHAILDMVQEDEVIDSLQSMEECDVIHQSDHDSDSEAELNNDNVLDDFIDCKNGYLCRNRKIVSKNPKISSVEALAKIKQAINLRKRNIVPSKNCPQPKAAWQMIFTDDLLELIVTSTNEKIIKNNNNISETTTVIEIRTLIGILYFHGIMRPTHQKYSDLWHNEYGAPCVRNAMTLERFKFLLKNMSFDNEDDDSIVQFDVMKRMRKVFEIFALNCRTSLDVGNLVVIDDVILPVYGPCPFRYNIAKKSFKNGLKLVLLIDPVTFYVTNLDVITDPYFGCDEIATKLVQHLAGTGRTVIMDSWFTSNSLMNRLKNEYKLYSIGAVNPNNEIIPPFFLSHYRKERTFINGFLDKDMCLCSYGMESEKDEEYEDEEEMMEQQQTFTHMPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHDFDRYTNKINTKKSHAHMQPKFRPNPFNPKARLMPNPISHKMQFHSKSMPPKMMPQKIIAPPKPIPIRTGKNSQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDGFVNQHEDDEIDDENNQGQNYDTVDMDSENEIEIARQQENDIQGDENHEVHDEENTQEDENNMEETNDDNEKENREDNGESQDNMDVENNIEEEADADDDNAKENDEENGEKDNDEQIINHEENEDDDDLPPMSIAPVVEINEDLQTNSYNSDGNEELDETVDPNDAVDGDEGEKDIDPDKVYITKTQRDFILKYRDIIQQINTKRCICCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEVEPKDVKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRFPHSCVHCGLRFKEKSIGKRHIRNGDCTVEICCELCSEKFLSLQEFNDHAVAIHAGSFDPDNQSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEEKPHHCQHCDAKFEQTADLNKHIYMEHSDRSLGMHTNEPDISLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQAHPGANTRGGESEFFCDLCIRSFKSRQAYSNHMRIHSKVPTTNRKPGETKGFGPQIIGKPIRHFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQASTEEDDYNVDENGAILSTPQFDSFNFTNLTNNMQQTSQDALPYSCELCYKRFPLRTSLWKHKRAKHGIINASASGASETQTQSSNEGRSSCTICKITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQSSSKSQDMNQEMDIEYDGDQDSVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQNQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVVDAVPVPPKTSTSTPATLAKRRLPPEVEVTVVNPNKKLRSDDSIEMDHQNNLSGGAEDRYCNLCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSTQMEEDVQACEVCGAQFDTVKALNSHRALHHGEESAESEDDGGAIAAPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078400;
90% Identity: iTF_01506540;
80% Identity: -