Basic Information

Insect: Nowickia ferox
Gene Symbol: -
Assembly: GCA_936446695.1
Location: CAKZFO010000027.1:5110545-5121206[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 7.9 7.7e+02 1.9 0.1 3 21 60 78 58 79 0.92

2 21 0.19 19 7.0 1.0 1 21 232 252 232 255 0.77

3 21 0.026 2.6 9.7 2.2 2 23 315 336 314 336 0.96

4 21 1.1 1e+02 4.6 1.5 1 23 413 436 413 436 0.96

5 21 0.013 1.3 10.6 3.3 2 23 444 465 443 465 0.97

6 21 0.0098 0.97 11.0 0.1 2 20 525 543 524 546 0.94

7 21 0.0014 0.13 13.7 1.5 1 23 619 642 619 642 0.90

8 21 0.0035 0.34 12.4 1.1 1 22 649 670 649 670 0.96

9 21 0.0008 0.079 14.5 1.4 2 23 743 764 742 764 0.94

10 21 0.038 3.7 9.2 0.1 2 20 791 809 790 811 0.92

11 21 0.00029 0.029 15.8 5.8 1 23 862 885 862 885 0.97

12 21 0.015 1.5 10.5 0.9 1 23 922 945 922 945 0.96

13 21 0.63 62 5.3 1.4 2 23 1000 1020 998 1020 0.91

14 21 2.2e-06 0.00021 22.5 1.5 1 23 1026 1048 1026 1048 0.98

15 21 0.0059 0.58 11.7 1.1 1 23 1054 1076 1054 1076 0.98

16 21 0.00025 0.024 16.1 2.2 1 23 1082 1104 1082 1104 0.99

17 21 0.0009 0.088 14.3 0.1 3 23 1133 1153 1132 1153 0.99

18 21 0.00042 0.041 15.4 5.8 1 23 1159 1181 1159 1181 0.98

19 21 3.9e-07 3.9e-05 24.9 1.4 1 23 1187 1209 1187 1209 0.99

20 21 0.00016 0.016 16.6 1.0 1 23 1215 1237 1215 1237 0.96

21 21 0.3 29 6.4 3.7 1 19 1243 1261 1243 1267 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	7.9	7.7e+02	1.9	0.1	3	21	60	78	58	79	0.92
2	21	0.19	19	7.0	1.0	1	21	232	252	232	255	0.77
3	21	0.026	2.6	9.7	2.2	2	23	315	336	314	336	0.96
4	21	1.1	1e+02	4.6	1.5	1	23	413	436	413	436	0.96
5	21	0.013	1.3	10.6	3.3	2	23	444	465	443	465	0.97
6	21	0.0098	0.97	11.0	0.1	2	20	525	543	524	546	0.94
7	21	0.0014	0.13	13.7	1.5	1	23	619	642	619	642	0.90
8	21	0.0035	0.34	12.4	1.1	1	22	649	670	649	670	0.96
9	21	0.0008	0.079	14.5	1.4	2	23	743	764	742	764	0.94
10	21	0.038	3.7	9.2	0.1	2	20	791	809	790	811	0.92
11	21	0.00029	0.029	15.8	5.8	1	23	862	885	862	885	0.97
12	21	0.015	1.5	10.5	0.9	1	23	922	945	922	945	0.96
13	21	0.63	62	5.3	1.4	2	23	1000	1020	998	1020	0.91
14	21	2.2e-06	0.00021	22.5	1.5	1	23	1026	1048	1026	1048	0.98
15	21	0.0059	0.58	11.7	1.1	1	23	1054	1076	1054	1076	0.98
16	21	0.00025	0.024	16.1	2.2	1	23	1082	1104	1082	1104	0.99
17	21	0.0009	0.088	14.3	0.1	3	23	1133	1153	1132	1153	0.99
18	21	0.00042	0.041	15.4	5.8	1	23	1159	1181	1159	1181	0.98
19	21	3.9e-07	3.9e-05	24.9	1.4	1	23	1187	1209	1187	1209	0.99
20	21	0.00016	0.016	16.6	1.0	1	23	1215	1237	1215	1237	0.96
21	21	0.3	29	6.4	3.7	1	19	1243	1261	1243	1267	0.94

Sequence Information

Coding Sequence: atGGCAAATGAGTGTTTTATTAATGGAGTGCAGTATAAATGTCGCACTTGCTTTGATCCAGGAGCAACAGTATATCCTCTTGCAGAGGAGTGTAGCAACTCTAAAACTTGGCGAGATTTATTGACCGATATTGTTAAGTTAAAGACAAACGACGACGAGTTACTGCCAAAGACTATTTGTTCGAAATGTTTGGAGAAACTTATCAATTACTACGATTTTATACTTCATATTCAAAATGTGAATGGAAAGTACCACCAGCTTTTGGCAAGTGGCAAACATTCTTCACAAAATGATAGTCTTGCCAGCATCTCTAACGATACAGCATTATCTTCCACTGCCTTTCCTTTGGGTCAATGTGTTCCCGAAATTAAGTTTGAGGAGGAGCTCCTTATTCCTTATGATGTTGTTTTAAATAACGACAATAGAATAAACAATGCGATAAAAGAAGATACTTGTGATCCTTTTAAGATGGAAGATGATATTGAGCACGCTTTAGATACATTGAAATACGAACAAAgatccCAAAATGAAGAAAATCGAGTTCTTGAGGATGGTATTAACGATTATAATTCCTATAACAGgtcCTCATCCTCCAGTGCAAGTGAACATGACCTGCTCACCAGtCACTCATTCGGAAAGAAAGCAGAGGAACAATTCTGCAAATACTTTCCAACCGAAAAAATCAACAATCATTTCGTGTGTGGGATATGCAATAAATCATTTAATTGGATGAGAAATTGTCGCAGGCATATAATCGCGATGCActacaaaagtaaattttacaaATGTGCATTTTGCGATCATCATGTGCAatgtaaaaattacttaatttgtCATCTTCAACGTAATCATCCAGAAGAATCATTTGAATCCAATGCGAAACAATTAGGTCGTTTGCTTGGGGAACGTTTGTATAGCAAACCTCTTCTATTACCACGAGTAGAATGTAAGCTGTGTTGTACTACTTTTGTAACTAAAAAACAACTTATTCAGCATCTAGAGAGCCATAGTGAAGCCAGTACTCTTCACAGTTTACAATTAAGCAGTGATATTATTCAGCGTTGGTTTCCAAAGAAGAGAGATTTGCAAGTCATAAAAGCAATGATATGTAAAGATGTTCGAGAAAAAAACTTTGTCAaatattacacaattttaaatgatttttcctacgAAATATCCATTAGTGATACGGATGCAGAAGATTTGGAAGAAGAAACAAAAGCACCTGCCAACAAATATAAATGCGAATTGTGTGCGAAAGATTATTTGTACAAACATCAAGTGTTTGCTCATTTGAGAGAGGATCATTTGAACGAAGACATTCCTTTGAAATGCAGCCATTGCAATCTGGAATTTATATCACTAAAAATGTATGAACAACATAAAAAAACCCACTGTCAGAATGAACATAAACTATTGATTTGTTCTAATTGCCTTGGCAAGTTTGTCTGGcccgaaaatatgaaaaaacacAATTGTGTTACGAAAATATTGGATATTGAAAAAACTCTTAATGTTAAAGTAAATGAGAGTTGCTATGATGAAATGCgttcatcgccaaaaactatCATAAGATGTGGCCTTTGTGACATTACCTTTGAAAAACTGCGCGATTTACGACAACACATGCCCTTGCACGCCGATGGCAAAACTGGAGTTGACTTTAATGGTTGTATTTATGTAAACCAATTTGAAAATGTATCCAGCAGTCGCGAATTGTTGAAACAGAAGATTAAAAATGCCTTCACGAAACGTCAAATAAGTCAACTGTATCAAGCCATCGATAAATATGGCAAAGAAGTGGATATTTCAGATTCGGATAGCGATGAAGATGATACTGATGAAGAAAAAAGCTATTTGTGTGAGCTTTGCAATGAAACGtttaaaaaacgaaaacttCTGTTTAAACATCAAGCTGATCAACACAGGAATGTTTCAATGCCTTTCACTTGCAAGAAATGTAAGACGCAATATGTTAGTATTGATTTGTTACAACAACATATGAAAAGAGAATGTTGGAATGAACATCGACTAGTGGCTGAACAATGCGATTGTTGTAAAGAGCGTTTTATATGGACGGATAACATGCTGAGACATAGAGAAATACAGcgATACATAAATAGTGACAATTCGCTAACGGATAACTTGTGTCGTGGCCAATCACAGAAAACAATTGCTTCATCAATCTCCAGCTCTGATGTGACAAGTGCCAATATccaaatttgttattgtttcttaTGTCCTAAAACTTTCGCCAATAATGATCAGTTCAATGATCATTTGATCGGTCATGGTCTCACACCATCCAACATCAAAATTGTTGCAAGCACAATACATTCTGTATGGTGGCCAAACGGCAAAAAgctaataaaatgcaaaatatgtgaccaagtttttttaagtaagggcgaattaaatgaacatttttcttctaaaaattccaaaaacttGTGTGGTGGAGGGCAACATTCAGTGGCAAATTACTCGATTACAAATCAAATGGGGTTTGAGTTACATTTAGAGCTGGACTCGGAAACGGAAACTGAAAGCATTGAAaatgaagaaaatgaaaatatattgccATATAAATGTTGCATGTGTGGTAAATCATTCAagcgaaaatttcaaataactcAGCATCAAACATCGATGCATAACTATGAATTGTTGGAACTCAAATGCGAACGTTGCTTTTTTAGAACTGTATCACAGAAAGTTTTAGATTATCATAGAATGAGTCAGTGTTTTGATGTTGAGAAAAAATACCAATGCGATCAGTGTAATTTCAAATTTATGTGGCAAGAAAACCTTGAAAAGCATGTTTCGATATTTCATACTTCGGACGTTTTCGTCAAAGCACTGCATGCGGCTAGCACAATGAGCAATACTAATGCTCAATGCCTTGAATCAGAAGAAGCTTCCCAGAATGATTTGTCGTTATCATTACATCAGAACGATTCAGATGCAAGGGACTGCATTGAGTCTAAAGATAAATGTAAATGTCTCATTTGTGGAATTTACATTagcaaaaataattatgcaGAACATATTAGGAGAcacaaatgtgacaaatcttacAAATGCGATTTTTGCGAAAAGGCCTTTATAACAAATTCGTCATTAAAGAAACATCAGGACATGCATACGGGAGAACGAACTTTCAAATGTACCTTATGCTGGAAATCGTTCAAGTGGCAAAAAGGTCTAGATGCCCATAAACGTTTACACACcaaaaaaatgcaatacaaaTGCACAATTTGTTCGAAATCATATCTAGAATCGGCACATCTGACTGCTCATATGCGATATCATTCGGGTGATAAGATGACGCCAGACAAGAAGTCTGACTCAACTGATTCTACTCAACATGCACAAGGGGAGAAAAAGACAAACTTATGTCCTATTTGTGGTGTCTATTTGTCATACAAAACAAGTCTTACAATACATATTAGAAGTCATACGGGAGAGAGGCCATTCAATTGCGATCTTTGTGATAAAACCTTTCATACTACAGTCCATTTAAATCTGCATCGACGCACACACTTTACTGAGCGTCCATTTAAATGTACAACTTGCGAGAAATCTTTTGTCAATAGAGGCAAATTAAAAGCTCACATGCGTATTCACACTGGCGAGCGTCCATATCAGTGCACGGTTTgtcagaaaaaatttatgaattgggGCACTTTGAAGGAGCATTCGCTTAATCATACTGGCAAGAAACCCTTTATATGTGAGATTTGCAATCAATCCTTTAAATGTCCCTGGTATCTCAAAAGGCATTGTATCAAAAGTGGCCATCATACagaaaataactga
Protein Sequence: MANECFINGVQYKCRTCFDPGATVYPLAEECSNSKTWRDLLTDIVKLKTNDDELLPKTICSKCLEKLINYYDFILHIQNVNGKYHQLLASGKHSSQNDSLASISNDTALSSTAFPLGQCVPEIKFEEELLIPYDVVLNNDNRINNAIKEDTCDPFKMEDDIEHALDTLKYEQRSQNEENRVLEDGINDYNSYNRSSSSSASEHDLLTSHSFGKKAEEQFCKYFPTEKINNHFVCGICNKSFNWMRNCRRHIIAMHYKSKFYKCAFCDHHVQCKNYLICHLQRNHPEESFESNAKQLGRLLGERLYSKPLLLPRVECKLCCTTFVTKKQLIQHLESHSEASTLHSLQLSSDIIQRWFPKKRDLQVIKAMICKDVREKNFVKYYTILNDFSYEISISDTDAEDLEEETKAPANKYKCELCAKDYLYKHQVFAHLREDHLNEDIPLKCSHCNLEFISLKMYEQHKKTHCQNEHKLLICSNCLGKFVWPENMKKHNCVTKILDIEKTLNVKVNESCYDEMRSSPKTIIRCGLCDITFEKLRDLRQHMPLHADGKTGVDFNGCIYVNQFENVSSSRELLKQKIKNAFTKRQISQLYQAIDKYGKEVDISDSDSDEDDTDEEKSYLCELCNETFKKRKLLFKHQADQHRNVSMPFTCKKCKTQYVSIDLLQQHMKRECWNEHRLVAEQCDCCKERFIWTDNMLRHREIQRYINSDNSLTDNLCRGQSQKTIASSISSSDVTSANIQICYCFLCPKTFANNDQFNDHLIGHGLTPSNIKIVASTIHSVWWPNGKKLIKCKICDQVFLSKGELNEHFSSKNSKNLCGGGQHSVANYSITNQMGFELHLELDSETETESIENEENENILPYKCCMCGKSFKRKFQITQHQTSMHNYELLELKCERCFFRTVSQKVLDYHRMSQCFDVEKKYQCDQCNFKFMWQENLEKHVSIFHTSDVFVKALHAASTMSNTNAQCLESEEASQNDLSLSLHQNDSDARDCIESKDKCKCLICGIYISKNNYAEHIRRHKCDKSYKCDFCEKAFITNSSLKKHQDMHTGERTFKCTLCWKSFKWQKGLDAHKRLHTKKMQYKCTICSKSYLESAHLTAHMRYHSGDKMTPDKKSDSTDSTQHAQGEKKTNLCPICGVYLSYKTSLTIHIRSHTGERPFNCDLCDKTFHTTVHLNLHRRTHFTERPFKCTTCEKSFVNRGKLKAHMRIHTGERPYQCTVCQKKFMNWGTLKEHSLNHTGKKPFICEICNQSFKCPWYLKRHCIKSGHHTENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398767; iTF_01074707; iTF_01074823;
90% Identity: -
80% Identity: -