Npan007450.1
Basic Information
- Insect
- Nomada panzeri
- Gene Symbol
- grn
- Assembly
- GCA_951802685.1
- Location
- OX637832.1:20978628-20985811[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1 6.2e+03 -2.6 0.1 10 23 11 23 8 24 0.49 2 2 2.9e-18 8.3e-15 54.6 5.6 1 35 78 111 78 112 0.97
Sequence Information
- Coding Sequence
- ATGGCTGGCGTATCGATCGGGAGCGACACGCGGCGGTGGCCCGATTCGACGGCCGGCAGGCTATTATGCAAGCGGTTCCGAGAAATCGAGGCTGGAGAGCGAGAGAAGAAGGGCACGGGTGCCGATGGGCCCGGGGAAGTCGGATACTGGAGCAGGGAACGGTGTGATATCtgtgtgtttttttttccaaaACTGTCGCTGCAGAGTGCGGCGAGGCGGGCGGGCACCAGCTGCGCCAACTGCAAGACCGCGACCACCACGCTCTGGCGGAGGAACCAGGCCGGAGAACCAGTCTGCAACGCGTGCGGCCTCTACTACAAGCTCCACAATGTGAATCGGCCGCTGACGATGAAGAAGGAGGGCATCCAGACGAGGAACAGGAAGCTCTCGTCGAAgagcaagaagaagaaggccGGGGGCTGCCTGGGCCTAGGCGGCGTCATGGGCGATATGATCAAGGCCAGCGGACACCTCGATCTCGACAACAAGCCCTTCCACTCGGGCTTCGGCTCGCCTATGAGCACGTCGCAGCATCATCACACGATGCATCCAGCGATGCAGCACTACATGTATCACACGGGGGTCGGTGTGGCCGGCGGTCTTCACCAAGGCTTCGCACCCCCAGCGCCACCGCCGATTCACCCCCACTCGCACTCGCATTCTCATTCCCACCACATGACGAGTCTCCAGGGTCTCCAGCTGGCCGCCACGACGAACGCAATGACCGGTTGGCGATCGGAGTACACATGA
- Protein Sequence
- MAGVSIGSDTRRWPDSTAGRLLCKRFREIEAGEREKKGTGADGPGEVGYWSRERCDICVFFFPKLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKASGHLDLDNKPFHSGFGSPMSTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01068652; iTF_00090071; iTF_00084964; iTF_00460164; iTF_00222213; iTF_01389863; iTF_01207785; iTF_00684496; iTF_00866385; iTF_01056465; iTF_00233586; iTF_00085843; iTF_00863636; iTF_00087605; iTF_00064855; iTF_00219479; iTF_01090360; iTF_00861562; iTF_00011611; iTF_00867067; iTF_01066622; iTF_00286875;
- 90% Identity
- iTF_01068652;
- 80% Identity
- -