Cfun000457.1
Basic Information
- Insect
- Cecidostiba fungosa
- Gene Symbol
- grn_1
- Assembly
- GCA_900474305.1
- Location
- UCOJ01000874.1:32222-40314[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-18 5.6e-15 54.7 5.6 1 35 56 89 56 90 0.97
Sequence Information
- Coding Sequence
- ATGTCATATCCGTCAGTGTTCGGGGATCTGCCTCCGAGTATAGCAACcgCGCGTACAGTGTATACACAGTACGCAGGTTATCACAGCGAGCTTTATACtaacaataaatttctttttctgtcgGAGCAGTCACTACAGAGCGCCGCGAGACGAGCGGGCACGAGCTGCGCGAACTGCaagacggcgacgacgacgctctgGCGAAGGAACCAGGCCGGCGAGCCCGTCTGCAACGCCTGCGGCCTCTACTACAAACTTCACAACGTCAACCGGCCGCTGACTATGAAGAAGGAGGGCATCCAGACGCGAAACAGGAAGCTCTCGTCGaagagcaaaaagaagaaggccGGCGGTTGCCTCGGACTCGGCGGCGTCATGGGCGACATGATGAAGGCCACCGCACACCTGGACCTCGACAACAAGCCCTTCCACTCTGGATTCGGATCGCCCATGACCGAGTATCGTACCTCGCAGCACCACCACACGATGCATCCGGCGATGCAGCACTACATGTACCACACGGGCGTCGGCGTAGGCGTCACCGGATCGTTGCACCAGGGCTTTGCGCCACCGGCTCCGCCGCCGATTCACCCGCACTCGCACTCACACTCGCACTCACATCACATGACCAGTCTACAGGGACTTCAGCTGGCTGCCACGACGAACGCAATGACGGGCTGGCGATCCGAGTACACATGA
- Protein Sequence
- MSYPSVFGDLPPSIATARTVYTQYAGYHSELYTNNKFLFLSEQSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMMKATAHLDLDNKPFHSGFGSPMTEYRTSQHHHTMHPAMQHYMYHTGVGVGVTGSLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070023;
- 90% Identity
- iTF_00646465; iTF_01112262; iTF_00690777;
- 80% Identity
- -