Nhir015460.1
Basic Information
- Insect
- Nomada hirtipes
- Gene Symbol
- grn
- Assembly
- GCA_951802735.1
- Location
- OX637925.1:14847938-14855284[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9 6.9e+03 -2.8 0.1 10 23 55 67 52 68 0.49 2 2 4.1e-18 9.8e-15 54.3 5.6 1 35 122 155 122 156 0.97
Sequence Information
- Coding Sequence
- ATGGTCGGATTCGCGACCGCCGCGGAGCGCACAGGGCGTCTTTTGTCAGAATCGACTGGACTTCCGGCGAATCGAGCAGCGCTCGAGGGATCGTTGCCGGGAGATTTATCGCGCGCGTTCCGAGGAGCGAAGATGGCTGGCGTATCGATCGGGAGCGACACGCGGCGGTGGCCCGATTCGACGGCCGGCAGGCTATTATGCAAGCGGTTCCGAGAAATCGAGGCTGGAGAGCGAAAGAAGAAGGACACGGGTGCCGATGGGCCCGGGGAAGTCGGATACTGGAGCAGGGAACGGTGTGATATctgtgtgtttttttttccaaaacTGTCGCTGCAGAGTGCGGCGAGGCGGGCGGGCACCAGCTGCGCCAACTGCAAGACCGCGACCACCACGCTCTGGCGGAGGAACCAGGCCGGAGAACCAGTCTGCAACGCGTGCGGCCTCTACTACAAGCTCCACAATGTGAATCGGCCGCTGACGATGAAGAAGGAGGGCATCCAGACGAGGAACAGGAAGCTCTCGTCGAagagcaagaagaagaaggccGGGGGCTGCCTGGGCCTAGGCGGCGTCATGGGCGATATGATCAAGGCCAGCGGACACCTCGATCTCGACAACAAGCCCTTCCACTCGGGCTTCGGCTCGCCTATGAGCACGTCGCAGCATCATCACACGATGCATCCAGCGATGCAGCACTACATGTATCACACGGGGGTCGGTGTGGCCGGCGGTCTTCACCAAGGCTTCGCACCCCCAGCGCCACCGCCGATTCACCCCCACTCGCACTCGCATTCTCATTCCCACCACATGACGAGTCTCCAGGGTCTCCAGCTGGCCGCCACGACGAACGCAATGACCGGTTGGCGATCGGAGTACACATGA
- Protein Sequence
- MVGFATAAERTGRLLSESTGLPANRAALEGSLPGDLSRAFRGAKMAGVSIGSDTRRWPDSTAGRLLCKRFREIEAGERKKKDTGADGPGEVGYWSRERCDICVFFFPKLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKASGHLDLDNKPFHSGFGSPMSTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070023;
- 90% Identity
- iTF_01070023;
- 80% Identity
- -