Nfer012598.1
Basic Information
- Insect
- Nomada ferruginata
- Gene Symbol
- grn
- Assembly
- GCA_963583965.1
- Location
- OY757222.1:550819-555353[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-18 6e-15 55.0 5.6 1 35 34 67 34 68 0.97
Sequence Information
- Coding Sequence
- ATGGACTCGGTTCTAGGACCGTTTACAGGTGTGATATCTGTGTGTGTTTTTTTTCCAAAACTGTCGCTGCAGAGTGCGGCGAGGCGGGCGGGCACCAGCTGCGCCAACTGCAAGACCGCGACCACCACGCTCTGGCGGAGGAACCAGGCCGGAGAACCAGTCTGCAACGCGTGCGGCCTCTACTACAAGCTCCACAATGTGAATCGGCCGCTGACGATGAAGAAGGAGGGCATCCAGACGAGGAACAGGAAGCTCTCGTCGAAgagcaagaagaagaaggccGGGGGCTGCCTGGGCCTAGGCGGCGTCATGGGCGATATGATCAAGGCCAGCGGACACCTCGATCTCGACAACAAGCCCTTCCACTCGGGCTTCGGCTCGCCTATGAGCACGTCGCAGCATCATCACACGATGCATCCAGCGATGCAGCACTACATGTATCACACGGGGGTCGGTGTGGCCGGCGGTCTTCACCAAGGCTTCGCACCCCCGGCGCCACCGCCGATTCACCCCCACTCGCACTCGCATTCTCATTCCCACCACATGACGAGTCTCCAGGGTCTCCAGCTGGCCGCCACGACGAACGCAATGACCGGTTGGCGATCGGAGTACACATGA
- Protein Sequence
- MDSVLGPFTGVISVCVFFPKLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKASGHLDLDNKPFHSGFGSPMSTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070023;
- 90% Identity
- iTF_00762921;
- 80% Identity
- iTF_00684496;