Nfim017048.1
Basic Information
- Insect
- Noctua fimbriata
- Gene Symbol
- -
- Assembly
- GCA_905163415.1
- Location
- LR990934.1:13625610-13631892[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-09 0.00013 22.3 3.4 109 171 177 239 125 253 0.90
Sequence Information
- Coding Sequence
- ATGCTGCACCGATTACCAGTCTCGCCTCTGCTGAAGCCCGCCTTCACTGCTGTCACCTTTCTCGTCTCGAACTCACTCACTACTCAGACCATTGCGTCCGACCTCTCGAACCGTCCAAGACCAACTGCCACGAGTCCACCACCCTTCCTCAGTCCATGGCCTTTCTCAACACATCACGCTTGGGTTGCCTTCCCAGAATTGGGATGTTGTGAACAAACAGCTGACAACGAAAAATACGCTAAATGCGTAAAATGTGTTAAGGCATATCATTATACATGTCTGTCTTTGGCTGACGACTACAATATACCTGCTAAGTGGCATTGTCCTGAAAGTCTAAACTCTGGCCCGAAACTTAGAAAATCCGATAACACGCCTTTGCGTAACATCTCAACTACCAGAAGCAATAAGAGGCAAGCCGTAGGATCTCCACCTCAGGCGCCTGTTGAAATTGCGTTAGCACCCGACGATATTCGTCTACTTATTCAGGAAGCAATTAAAAAGGAACAGGCAGAGATGTTAACTAAGTTCATAGAAAACATGAAACTAACCCTGAATCAACAGTTGCAACCAATAAAAGATCAAATGGAGAATATGGAAAAATCCATGGCTTTCATGAATCATCAGTATGAAGATCTTTTAAAAGAATATACAGCGTCCAAGGAGAATATGAAAGAGTTGCAAAGAGAGAACTCTGAGATGAAAGTGTGTATTAACGATTTGACTTCACGCATGAATCAACTGGAACAGCAAACCCGTGCAGACAATGTAGAAATTCAGTGCCTGCCGGAAAAGAAATACGAAAATTTGATAGAGATTGTGTCACACTTGTCTAAAGTAGTAGGGAGCAATATTCAAGACCACGACATTAAGCATTGCACAAGAGTCGCTAAACAAAATACCAGCAATTCCCGACCGCGTGCCGTGTTAGTACAACTTGCTTTCCCCCGTAGTCGTGACCAATTTCTCGCAGCcaccataaaatttaataaatcgaaTCCATGCAACAAACTGAATACAACACACTTGGGATACTCTGGACCTAAATCCCTGATCTACATTACAGAACATCTCTCCACTACCAATAAGGCACTCCATGCGGCCGCTAGAATCAAAGCCAAGGAAATCGGATATCAGTTTGTCTGGGTACGAGGCGGTCGGATATTCATGCGGAAGACACAGGAATCAGAACACATTCTGATAAGGAATAAAGACACTTTGAATGAGCTGGTTTAA
- Protein Sequence
- MLHRLPVSPLLKPAFTAVTFLVSNSLTTQTIASDLSNRPRPTATSPPPFLSPWPFSTHHAWVAFPELGCCEQTADNEKYAKCVKCVKAYHYTCLSLADDYNIPAKWHCPESLNSGPKLRKSDNTPLRNISTTRSNKRQAVGSPPQAPVEIALAPDDIRLLIQEAIKKEQAEMLTKFIENMKLTLNQQLQPIKDQMENMEKSMAFMNHQYEDLLKEYTASKENMKELQRENSEMKVCINDLTSRMNQLEQQTRADNVEIQCLPEKKYENLIEIVSHLSKVVGSNIQDHDIKHCTRVAKQNTSNSRPRAVLVQLAFPRSRDQFLAATIKFNKSNPCNKLNTTHLGYSGPKSLIYITEHLSTTNKALHAAARIKAKEIGYQFVWVRGGRIFMRKTQESEHILIRNKDTLNELV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01285562;
- 90% Identity
- iTF_00711885;
- 80% Identity
- -